Contig 003161:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS054B01+                                                         TTCACTTTCATCAC
                      ____________________________________________________________
consensus                                                           TTCACTTTCATCAC
 
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JMFS054B01+           TTCTTCAAATTCTTTTTGCAACTCTTCGTTCTGCTTCGAAAGTTCATCTTTCTCCTTAAC
                      ____________________________________________________________
consensus             TTCTTCAAATTCTTTTTGCAACTCTTCGTTCTGCTTCGAAAGTTCATCTTTCTCCTTAAC
 
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JMFS054B01+           CGCCCCACTAAGCTCGGTCGATACCTTATCAACCTTCACCAAAGCCTCTTCCTTCTCGCG
                      ____________________________________________________________
consensus             CGCCCCACTAAGCTCGGTCGATACCTTATCAACCTTCACCAAAGCCTCTTCCTTCTCGCG
 
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JMFS054B01+           CAAGGCCTGATCCCGCTGCTTCGACGACTCATCGCGCTTCCTAATAGCCTCGTGAGCTAG
JMFS100C04+           CAAGGCCTGATCCCGCTGCTTCGACGACTCATCGCGCTTCCTAATAGCCTCGTGAGCTAG
                      ____________________________________________________________
consensus             CAAGGCCTGATCCCGCTGCTTCGACGACTCATCGCGCTTCCTAATAGCCTCGTGAGCTAG
 
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JMFS054B01+           GACTTTCAATCGGTTGAGGGAGACTTCCAATTGGGATTTGGAATTCTCCGCGGCGATGCG
JMFS100C04+           GACTTTCAATCGGTTGAGGGAGACTTCCAATTGGGATTTGGAATTCTCCGCGGCGATGCG
JMFF021P09+                                                                 GATGCG
                      ____________________________________________________________
consensus             GACTTTCAATCGGTTGAGGGAGACTTCCAATTGGGATTTGGAATTCTCCGCGGCGATGCG
 
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JMFS054B01+           CGCTTGCCTCTCGCGATCGAGCTCGGCAAGGACCTCCCGGAATTTCTCCAGGGATACGTC
JMFS100C04+           CGCTTGCCTCTCGCGATCGAGCTCGGCAAGGACCTCCCGGAATTTCTCCAGGGATACGTC
JMFF021P09+           CGCTTGCCTCTCGCGATCGAGCTCGGCAAGGACCTCCCGGAATTTCTCCAGGGATACGTC
                      ____________________________________________________________
consensus             CGCTTGCCTCTCGCGATCGAGCTCGGCAAGGACCTCCCGGAATTTCTCCAGGGATACGTC
 
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JMFS054B01+           TTCCGGGGACGGAGTCTCAACATCGATCGCCGCAGGCTCGTCGGCCTCGACATCGCTCAG
JMFS100C04+           TTCCGGGGACGGAGTCTCAACATCGATCGCCGCAGGCTCGTCGGCCTCGACATCGCTCAG
JMSF005G13+                                                        CTCGACATCGCTCAG
JMFF021P09+           TTCCGGGGACGGAGTCTCAACATCGATCGCCGCAGGCTCGTCGGCCTCGACATCGCTCAG
                      ____________________________________________________________
consensus             TTCCGGGGACGGAGTCTCAACATCGATCGCCGCAGGCTCGTCGGCCTCGACATCGCTCAG
 
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JMFS054B01+           AACGGCGTCGTTTTCCTCTTCCCCGGCGTTCGCCATTCATACATATCAATTATATATCCA
JMFS100C04+           AACGGCGTCGTTTTCCTCTTCCCCGGCGTTCGCCATTCATACATATCAATTATATATCCA
JMSF005G13+           AACGGCGTCGTTTTCCTCTTCCCCGGCGTTCGCCATTCATACATATCAATTATATATCCA
JMFF021P09+           AACGGCGTCGTTTTCCTCTTCCCCGGCGTTCGCCATTCATACATATCAATTATATATCCA
                      ____________________________________________________________
consensus             AACGGCGTCGTTTTCCTCTTCCCCGGCGTTCGCCATTCATACATATCAATTATATATCCA
 
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JMFS054B01+           AACAATACAAAAAATTTTCTATAACTAATCAGTCGTAGTGTGCTTCATTAATCATTAAAC
JMFS100C04+           AACAATACAAAAAATTTTCTATAACTAATCAGTCGTAGTGTGCTTCATTAATCATTAAAC
JMSF005G13+           AACAATACAAAAAATTTTCTATAACTAATCAGTCGTAGTGTGCTTCATTAATCATTAAAC
JMFF021P09+           AACAATACAAAAAATTTTCTATAACTAATCAGTCGTAGTGTGCTTCATTAATCATTAAAC
                      ____________________________________________________________
consensus             AACAATACAAAAAATTTTCTATAACTAATCAGTCGTAGTGTGCTTCATTAATCATTAAAC
 
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JMFS054B01+           CTAAAATGAACCGCGAATTAAAAGCGTGCTAAACAAGCAAGCAAACAAGCGAATTCATGA
JMFS100C04+           CTAAAATGAACCGCGAATTAAAAGCGTGCTAAACAAGCAAGCAAACAAGCGAATTCATGA
JMSF005G13+           CTAAAATGAACCGCGAATTAAAAGCGTGCTAAACAAGCAAGCAAACAAGCGAATTCATGA
JMFF021P09+           CTAAAATGAACCGCGAATTAAAAGCGTGCTAAACAAGCAAGCAAACAAGCGAATTCATGA
                      ____________________________________________________________
consensus             CTAAAATGAACCGCGAATTAAAAGCGTGCTAAACAAGCAAGCAAACAAGCGAATTCATGA
 
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JMFS054B01+           ACCCTAAGATTTGGTATGTGATTGCCGGCCGAAACCNTAAGATTTG              
JMFS100C04+           ACCCTAAGATTTGGTATGTGATTGCCGGCCGAAACCCTAAGATTTGGTATGGGGGAGGAC
JMSF005G13+           ACCCTAAGATTTGGTATGTGATTGCCGGCCGAAACCCTAAGATTTGGTATGGGGGAGGAC
JMFF021P09+           ACCCTAAGATTTGGTATGTGATTGCCGGCCGAAACCCTAAGATTTGGTATGGGGGAGGAC
                      ____________________________________________________________
consensus             ACCCTAAGATTTGGTATGTGATTGCCGGCCGAAACCCTAAGATTTGGTATGGGGGAGGAC
 
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JMFS100C04+           TTGAGTCAACCGATGACGGTGTTGATGACTTTAATTTCGTCTCAACCGGAGGGATTTTAT
JMSF005G13+           TTGAGTCAACCGATGACGGTGTTGATGACTTTAATTTCGTCTCAACCGGAGGGATTTTAT
JMFF021P09+           TTGAGTCAACCGATGACGGTGTTGATGACTTTAATTTCGTCTCAACCGGAGGGATTTTAT
                      ____________________________________________________________
consensus             TTGAGTCAACCGATGACGGTGTTGATGACTTTAATTTCGTCTCAACCGGAGGGATTTTAT
 
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JMFS100C04+           GGTAATTTAGTCAATCTCATGAACACCACGGGGAGAGAGAGAGAGAGAGAGTGGAGGGAA
JMSF005G13+           GGTAATTTAGTCAATCTCATGAACACCACGGGGAGAGAGAGAGAGAGAGAGTGGAGGGAA
JMFF021P09+           GGTAATTTAGTCAATCTCATGAACACCACGGGGAGAGAGAGAGAGAGAGAGTGGAGGGAA
                      ____________________________________________________________
consensus             GGTAATTTAGTCAATCTCATGAACACCACGGGGAGAGAGAGAGAGAGAGAGTGGAGGGAA
 
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JMFS100C04+           GAAGACGAAAGATTG                                             
JMSF005G13+           GAAGACGAAAGATTGCCGGAAACT                                    
JMFF021P09+           GAAGACGAAAGATTGCCGGAAACTGCAATTTCGTCTGCCGGAAGGAAAATTATAAACTAT
                      ____________________________________________________________
consensus             GAAGACGAAAGATTGCCGGAAACTGCAATTTCGTCTGCCGGAAGGAAAATTATAAACTAT