Contig 003160:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015I02Sequence541003160 (7)ref|XP_004230008.1|2e-40PREDICTED: probable mitochondrial chaperone BCS1-A [Solanum lycopersicum]425011194 (6)ref|XP_009596448.1|4e-09PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis]
JMFF021O09Sequence501003160 (7)ref|XP_009596448.1|1e-38PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis]383011194 (6)
JMFF042L01Sequence642003160 (7)ref|XP_009596448.1|5e-52PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis]255011194 (6)
JMFF047D18Sequence614003160 (7)ref|XP_009596448.1|2e-58PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis]524011194 (6)ref|XP_009794987.1|2e-27PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana sylvestris]
JMFS141A10Sequence621003160 (7)ref|XP_009596448.1|2e-51PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis]
JMFS142G10Sequence619003160 (7)ref|XP_009596448.1|2e-51PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis]
JMSF040L11Sequence675003160 (7)ref|XP_009596448.1|7e-90PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis]618011194 (6)ref|XP_009794987.1|7e-42PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana sylvestris]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+                                                             CCGGAAGGGC
                      ____________________________________________________________
consensus                                                               CCGGAAGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           CGTAGAGGAGAAAACTTCGGCGCCAAACGCGGCCTAGTTTGTGATAATACTGCTGCGATT
                      ____________________________________________________________
consensus             CGTAGAGGAGAAAACTTCGGCGCCAAACGCGGCCTAGTTTGTGATAATACTGCTGCGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           TAAGAAACGTCTCGAGGTCGGACTTGACCCGGTTCTTCAGATCCGACTCCATCACCACCG
                      ____________________________________________________________
consensus             TAAGAAACGTCTCGAGGTCGGACTTGACCCGGTTCTTCAGATCCGACTCCATCACCACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           TCTCGAAAGTGGAAGGATGCGTGAACGGAACGGATCTCCACCGTCCGGCGGCGGAATCAT
JMFF047D18+                                  AACGGAACGGATCTCCACCGTCCGGCGGCGGAATCAT
                      ____________________________________________________________
consensus             TCTCGAAAGTGGAAGGATGCGTGAACGGAACGGATCTCCACCGTCCGGCGGCGGAATCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           CCGACGCCAGAGAGCGATTCATGAACAGCTTCAACTCCCGTCGGCGCTGCTCGATGTTAT
JMFF047D18+           CCGACGCCAGAGAGCGATTCATGAACAGCTTCAACTCCCGTCGGCGCTGCTCGATGTTAT
JMFF042L01+             GACGCCAGAGAGCGATTCATGAACAGCTTCAACTCCCGTCGGCGCTGCTCGATGTATT
JMFS142G10+                                    CAGCTTCAACTCCCGTCGGCGCTGCTCGATGTTAT
JMFS141A10+                                  AACAGCTTCAACTCCCGTCGGCGCTGCTCGATGTTAT
                      ____________________________________________________________
consensus             CCGACGCCAGAGAGCGATTCATGAACAGCTTCAACTCCCGTCGGCGCTGCTCGATGTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           CGGACACCGTATGAATGTGCTGAAGATACGGGCGGAGAATCCGGCGCTTATCCTTCTTCT
JMFF047D18+           CGGACACCGTATGAATGTGCTGAAGATACGGGCGGAGAATCCGGCGCTTATCCTTCTTCT
JMFF042L01+           CGGACACCGTATGAATGTGCTGAAGATACGGGCGGAGAATCCGGCGCTTATCCTTCTTCT
JMFS142G10+           CGGACACCGTATGAATGTGCTGAAGATACGGGCGGAGAATCCGGCGCTTATCCTTCTTCT
JMFS141A10+           CGGACACCGTATGAATGTGCTGAAGATACGGGCGGAGAATCCGGCGCTTATCCTTCTTCT
JMFF015I02+                                                                TTCTTCT
                      ____________________________________________________________
consensus             CGGACACCGTATGAATGTGCTGAAGATACGGGCGGAGAATCCGGCGCTTATCCTTCTTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           TTATCCTCAACACAAGGCTCCGCCCCCCACCGTCGTGGACCTTGTTCATCCACGAGACTC
JMFF047D18+           TTATCCTCAACACAAGGCTCCGCCCCCCACCGTCGTGGACCTTGTTCATCCACGAGACTC
JMFF042L01+           TTATCCTCAACACAAGGCTCCGCCCCCCACCGTCGTGGACCTTGTTCATCCACGAGACTC
JMFS142G10+           TTATCCTCAACACAAGGCTCCGCCCCCCACCGTCGTGGACCTTGTTCATCCACGAGACTC
JMFS141A10+           TTATCCTCAACACAAGGCTCCGCCCCCCACCGTCGTGGACCTTGTTCATCCACGAGACTC
JMFF015I02+           TTATCCTCAACACAAGGCTCCGCCCCCCACCGTCGTGGACCTTGTTCATCCACGAGACTC
JMFF021O09+                                                  CCTTGTTCATCCACGAGACTC
                      ____________________________________________________________
consensus             TTATCCTCAACACAAGGCTCCGCCCCCCACCGTCGTGGACCTTGTTCATCCACGAGACTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           TCGCCCCGAGAAACTGATCCTGAACCACCTGGTTATCGTCGAGGCAGAGCACGATATCGT
JMFF047D18+           TCGCCCCGAGAAACTGATCCTGAACCACCTGGTTATCGTCGAGGCAGAGCACGATATCGT
JMFF042L01+           TCGCCCCGAGAAACTGATCCTGAACCACCTGGTTATCGTCGAGGCAGAGCACGATATCGT
JMFS142G10+           TCGCCCCGAGAAACTGATCCTGAACCACCTGGTTATCGTCGAGGCAGAGCACGATATCGT
JMFS141A10+           TCGCCCCGAGAAACTGATCCTGAACCACCTGGTTATCGTCGAGGCAGAGCACGATATCGT
JMFF015I02+           TCGCCCCGAGAAACTGATCCTGAACCACNTGGTTATCGTCGAGGCAGAGCACGATATCGT
JMFF021O09+           TCGCCCCGAGAAACTGATCCTGAACCACCTGGTTATCGTCGAGGCAGAGCACGATATCGT
                      ____________________________________________________________
consensus             TCGCCCCGAGAAACTGATCCTGAACCACCTGGTTATCGTCGAGGCAGAGCACGATATCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
JMFF047D18+           TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
JMFF042L01+           TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
JMFS142G10+           TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
JMFS141A10+           TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
JMFF015I02+           TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
JMFF021O09+           TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
                      ____________________________________________________________
consensus             TGGATTTAACGGCGGCGGAGTTCACCAAATTGGTGAAATCGGAATCCTCGAGGGAGGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
JMFF047D18+           GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
JMFF042L01+           GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
JMFS142G10+           GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
JMFS141A10+           GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
JMFF015I02+           GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
JMFF021O09+           GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
                      ____________________________________________________________
consensus             GAGAATTGACGTAGACGAAGACTTTCCTGTACAGCTGATTCTCCTGAGCGTTTTGGTTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAATCCGACCACT
JMFF047D18+           GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAACCCGACCACT
JMFF042L01+           GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAATCCGACCACT
JMFS142G10+           GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAATCCGACCACT
JMFS141A10+           GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAATCCGACCACT
JMFF015I02+           GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAATCCGACCACT
JMFF021O09+           GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAATCCGACCACT
                      ____________________________________________________________
consensus             GCTGCGGGACTTTGAAGAACTGATGAACATGAAGCTTGTCGTCAATCCAATCCGACCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
JMFF047D18+           TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
JMFF042L01+           TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
JMFS142G10+           TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
JMFS141A10+           TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
JMFF015I02+           TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
JMFF021O09+           TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
                      ____________________________________________________________
consensus             TCCTCAGAGCGAAAACCAGAGCGCTTCGGTACAAGAACAGCCTCACCGCCGCGAATACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040L11+           AGAC                                                        
JMFF047D18+           AGACGCAGAACGCGAACACGACAACCATGTTTACAATAAACATGGCGACCAAGCTCTGAT
JMFF042L01+           AGACGCAGAACGCGAACACGACAACCATGTTTACAATAAACATGGCGACCAAGCTCTGAT
JMFS142G10+           AGACGCAGAACGCGAACACGACAACCATGTTTACAATAAACATGGCGACCAAGCTCTGAT
JMFS141A10+           AGACGCAGAACGCGAACACGACAACCATGTTTACAATAAACATGGCGACCAAGCTCTGAT
JMFF015I02+           AGACGCAGAACGCGAACACGACAACCATGTTTACAATAAACATGGCGACCAAGCTCTGAT
JMFF021O09+           AGACGCAGAACGCGAACACGACAACCATGTTTACAATAAACATGGCGACCAAGCTCTGAT
                      ____________________________________________________________
consensus             AGACGCAGAACGCGAACACGACAACCATGTTTACAATAAACATGGCGACCAAGCTCTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF047D18+           TAAGGCTGGATCCGAGGGTTGATTTACCAAAGAT                          
JMFF042L01+           TAAGGCTGGATCCGAGGGTTGATTTACCAAAGATAATGAGGATTATTAGTACTGCTCTCC
JMFS142G10+           TAAGGCTGGATCCGAGGGTTGATTTACCAAAGATAATGAGGATTATTAGTACTGCTCTCC
JMFS141A10+           TAAGGCTGGATCCGAGGGTTGATTTACCAAAGATAATGAGGATTATTAGTACTGCTCTCC
JMFF015I02+           TAAGGCTGGATCCGAGGGTTGATTTACCAAAGATAATGAGGATTATTAGTACTGCTCTCC
JMFF021O09+           TAAGGCTGGATCCGAGGGTTGATTTACCAAAGATAATGAGGATTATTAGTACTGCTCTCC
                      ____________________________________________________________
consensus             TAAGGCTGGATCCGAGGGTTGATTTACCAAAGATAATGAGGATTATTAGTACTGCTCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042L01+           AAGGAACACCATTTTTAAGAGTCGAAGCGACTAGTGACGGGGAG                
JMFS142G10+           AAGGAACACCATTTTTAAGAGTCGAAGCGACTAGTGACGGGGAG                
JMFS141A10+           AAGGAACACCATTTTTAAGAGTCGAAGCGACTAGTGACGGGGAG                
JMFF015I02+           AAGGAACACCATTTTTAAGAGTCGAAGCGACTAGTGACGGGGAGAAAAAGAT        
JMFF021O09+           AAGGAACACCATTTTTAAGAGTCGAAGCGACTAGTGACGGGGAGAAAAAGATAATCATTT
                      ____________________________________________________________
consensus             AAGGAACACCATTTTTAAGAGTCGAAGCGACTAGTGACGGGGAGAAAAAGATAATCATTT