Contig 003159:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021I14Sequence606003159 (2)ref|XP_009773751.1|6e-57PREDICTED: wall-associated receptor kinase-like 1 [Nicotiana sylvestris]748011054 (2)ref|XP_009627286.1|8e-55PREDICTED: wall-associated receptor kinase-like 1 [Nicotiana tomentosiformis]
JMSF021K06Sequence686003159 (2)ref|XP_010317039.1|2e-65PREDICTED: wall-associated receptor kinase-like 1 [Solanum lycopersicum]779011054 (2)gb|KDP41423.1|1e-83hypothetical protein JCGZ_15830 [Jatropha curcas]

Alignment

This contig is upended


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JMSF021K06+                                             TCAAAAAAGCGGAATTACATCTCTTG
                      ____________________________________________________________
consensus                                               TCAAAAAAGCGGAATTACATCTCTTG
 
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JMSF021K06+           AGATTATCGTTGCTGCCGTCGCTCTGGATTCCCGAATTCGTGAAATTGGCGGTGTAGGAG
JMFF021I14+                                                                 TAGGAG
                      ____________________________________________________________
consensus             AGATTATCGTTGCTGCCGTCGCTCTGGATTCCCGAATTCGTGAAATTGGCGGTGTAGGAG
 
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JMSF021K06+           GTGAGATCGAAGGGGACGGGAGTTTCGCAACAGTCGATGCCGTAGCATCCGGCGAATCCG
JMFF021I14+           GTGAGATCGAAGGGGACGGGAGTTTCGCAACAGTCGATGCCGTAGCATCCGGCGAATCCG
                      ____________________________________________________________
consensus             GTGAGATCGAAGGGGACGGGAGTTTCGCAACAGTCGATGCCGTAGCATCCGGCGAATCCG
 
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JMSF021K06+           GAGCTGATGTTGGCGCCGCAAATGGCGGTGCAGCCGGCGACGACGGTGGAGTTCTGAGTG
JMFF021I14+           GAGCTGATGTTGGCGCCGCAAATGGCGGTGCAGCCGGCGACGACGGTGGAGTTCTGAGTG
                      ____________________________________________________________
consensus             GAGCTGATGTTGGCGCCGCAAATGGCGGTGCAGCCGGCGACGACGGTGGAGTTCTGAGTG
 
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JMSF021K06+           AACAGGGAGTTGCCGCATCCGGCGAACAGGAATTTGTTGCGCGATTTGGAGTAGTAGAAA
JMFF021I14+           AACAGGGAGTTGCCGCATCCGGCGAACAGGAATTTGTTGCGCGATTTGGAGTAGTAGAAA
                      ____________________________________________________________
consensus             AACAGGGAGTTGCCGCATCCGGCGAACAGGAATTTGTTGCGCGATTTGGAGTAGTAGAAA
 
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JMSF021K06+           GGGGAGCCGGAGAGATCTGTGCCGTTGGTGATGGCGTTCCGACCCGCGGAATCGTCGCAG
JMFF021I14+           GGGGAGCCGGAGAGATCTGTGCCGTTGGTGATGGCGTTCCGACCCGCGGAATCGTCGCAG
                      ____________________________________________________________
consensus             GGGGAGCCGGAGAGATCTGTGCCGTTGGTGATGGCGTTCCGACCCGCGGAATCGTCGCAG
 
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JMSF021K06+           AAATTCACAACGGATTTTAGAGTCGTGATGGTTTGATTTTCCAGCGAAACCGCCACCACT
JMFF021I14+           AAATTCACAACGGATTTTAGAGTCGTGATGGTTTGATTTTCCAGCGAAACCGCCACCACT
                      ____________________________________________________________
consensus             AAATTCACAACGGATTTTAGAGTCGTGATGGTTTGATTTTCCAGCGAAACCGCCACCACT
 
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JMSF021K06+           TCTCCTTGGAGCTCGATTTGGACGAATGAGTTTAGGTATGCTTTGGGAGGCGCGCTGCTG
JMFF021I14+           TCTCCTTGGAGCTCGATTTGGACGAATGAGTTTAGGTATGCTTTGGGAGGCGCGCTGCTG
                      ____________________________________________________________
consensus             TCTCCTTGGAGCTCGATTTGGACGAATGAGTTTAGGTATGCTTTGGGAGGCGCGCTGCTG
 
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JMSF021K06+           TTATCGCAGTTTACTAAGAACCATGGATTGAGAGCGCAGCCCTCGCCGATTCCGAAAGGA
JMFF021I14+           TTATCGCAGTTTACTAAGAACCATGGATTGAGAGCGCAGCCCTCGCCGATTCCGAAAGGA
                      ____________________________________________________________
consensus             TTATCGCAGTTTACTAAGAACCATGGATTGAGAGCGCAGCCCTCGCCGATTCCGAAAGGA
 
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JMSF021K06+           AACGGAATTGAGACGTTTCCGCACCGCTGTTCGCAGCGCGGCTTTGCGAGTGACGGCGCC
JMFF021I14+           AACGGAATTGAGACGTTTCCGCACCGCTGTTCGCAGCGCGGCTTTGCGAGTGACGGCGCC
                      ____________________________________________________________
consensus             AACGGAATTGAGACGTTTCCGCACCGCTGTTCGCAGCGCGGCTTTGCGAGTGACGGCGCC
 
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JMSF021K06+           GCTGCTGCCGACGGGAACAGCGGCGGCACGTGAAAGAAGAGGAAAGCGAAAAGCAGCAGG
JMFF021I14+           GCTGCTGCCGACGGGAACAGCGGCGGCACGTGAAAGAAGAGGAAAGCGAAAAGCAGCAGG
                      ____________________________________________________________
consensus             GCTGCTGCCGACGGGAACAGCGGCGGCACGTGAAAGAAGAGGAAAGCGAAAAGCAGCAGG
 
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JMSF021K06+           CGGCGGAAGATCATTTCCGGCGAGTTAGTTCTTCGTTAATGAAGCTTGACTTGATCAA  
JMFF021I14+           CGGCGGAAGATCATTTCCGGCGAGTTAGTTCTTCGTTAATGAAGCTTGACTTGATCAATC
                      ____________________________________________________________
consensus             CGGCGGAAGATCATTTCCGGCGAGTTAGTTCTTCGTTAATGAAGCTTGACTTGATCAATC