clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF020F14 | Sequence | 571 | 003150 (4) | gb|ADL63117.1| | 2e-97 | sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [ | 691 | 009860 (2) | gb|ADL63117.1| | 3e-66 | sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [ |
JMFF038B19 | Sequence | 478 | 003150 (4) | gb|ADL63117.1| | 2e-80 | sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [ | |||||
JMFF050P20 | Sequence | 606 | 003150 (4) | gb|ADL63117.1| | 1e-106 | sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [ | 592 | 009860 (2) | gb|ADL63117.1| | 1e-35 | sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [ |
JMFS158E02 | Sequence | 413 | 003150 (4) | gb|ADL63117.1| | 3e-45 | sucrose transporter 2y [Ipomoea batatas] gb|ADL63121.1| sucrose transporter 2y [ |
This contig is upended
. : . : . : . : . : . :
JMFF038B19+ TTGCCCATCCAGTCCG
____________________________________________________________
consensus TTGCCCATCCAGTCCG
. : . : . : . : . : . :
JMFF038B19+ TGTCGAAGAGGAAGAAAGGGAACCATGCAATCCAGTTGAGGCACGTGACGAGCAGCAGGA
____________________________________________________________
consensus TGTCGAAGAGGAAGAAAGGGAACCATGCAATCCAGTTGAGGCACGTGACGAGCAGCAGGA
. : . : . : . : . : . :
JMFF038B19+ TCCACATGGACCTCGGGAGGTCCCTCAGAGCNCCGAATATTTCCCCGAAGAACGGCAACT
JMFS158E02+ GGCAACT
____________________________________________________________
consensus TCCACATGGACCTCGGGAGGTCCCTCAGAGCNCCGAATATTTCCCCGAAGAACGGCAACT
. : . : . : . : . : . :
JMFF038B19+ TCGATTTCTCCGACGGCAACTTTTCGTCGTCGTCGTCTACTTCGTCCACCTCCTTCGAAA
JMFS158E02+ TCGATTTCTCCGACGGCAACTTTTCGTCGTCGTCGTCTACTTCGTCCACCTCCTTCGAAA
____________________________________________________________
consensus TCGATTTCTCCGACGGCAACTTTTCGTCGTCGTCGTCTACTTCGTCCACCTCCTTCGAAA
. : . : . : . : . : . :
JMFF038B19+ GCTCGTGCTCGCGGACCGTGCTCAGGGCCAGGGTAGTGAGGGACAGTAACAGAGCGGCGG
JMFS158E02+ GCTCGTGCTCGCGGACCGTGCTCAGGGCCAGGGTAGTGAGGGACAGTAACAGAGCGGCGG
____________________________________________________________
consensus GCTCGTGCTCGCGGACCGTGCTCAGGGCCAGGGTAGTGAGGGACAGTAACAGAGCGGCGG
. : . : . : . : . : . :
JMFF038B19+ AGATGAAGAAACAGCTCTTCAGGTTGGCGCAGTAAACGTCGCAGGCTTTGGTCTTCGAGA
JMFS158E02+ AGATGAAGAAACAGCTCTTCAGGTTGGCGCAGTAAACGTCGCAGGCTTTGGTCTTCGAGA
____________________________________________________________
consensus AGATGAAGAAACAGCTCTTCAGGTTGGCGCAGTAAACGTCGCAGGCTTTGGTCTTCGAGA
. : . : . : . : . : . :
JMFF038B19+ ACGGAAACACTTTGTGGAGGCCGGACCACGAGCCGGCGGCGTAACCCAGGATGTTTCCGA
JMFS158E02+ ACGGAAACACTTTGTGGAGGCCGGACCACGAGCCGGCGGCGCCCCCCAGGATGTTTCCGA
____________________________________________________________
consensus ACGGAAACACTTTGTGGAGGCCGGACCACGAGCCGGCGGCGTCCCCCAGGATGTTTCCGA
. : . : . : . : . : . :
JMFF038B19+ TCGCCATGAAGAAGGAGAAGAATGAGTTCGCCGTTCTCATCCTCTTCGCTCTCCCGCCGG
JMFS158E02+ TCGCCATGAAGAAGGAGAAGAATGAGTTCGCCGTTCTCATCCTCTTCGCTCTCCCGCCGG
JMFF050P20+ CGCCGG
____________________________________________________________
consensus TCGCCATGAAGAAGGAGAAGAATGAGTTCGCCGTTCTCATCCTCTTCGCTCTCCCGCCGG
. : . : . : . : . : . :
JMFF038B19+ ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATA
JMFS158E02+ ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATATTAATTGCGA
JMFF050P20+ ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATATTATTTGCGACGTCGAGAA
JMFF020F14+ CCCTGTAACATATTATTTGCGACGTCGAGAA
____________________________________________________________
consensus ACAGATCCGCCAGTAATGCTCTACATGGGCCCTGTAACATATTATTTGCGACGTCGAGAA
. : . : . : . : . : . :
JMFF050P20+ TCCAGAAGCCAACGACGAAAACAGCAATAGCGCGTGGCTTAATCATTTTGCCAACGGGGT
JMFF020F14+ TCCAGAAGCCAACGACGAAAACAGCAATAGCGCGTGGCTTAATCATTTTGCCAACGGGGT
____________________________________________________________
consensus TCCAGAAGCCAACGACGAAAACAGCAATAGCGCGTGGCTTAATCATTTTGCCAACGGGGT
. : . : . : . : . : . :
JMFF050P20+ CGCCGGAGGCGTGGCCGATGTCGGCGGCGAAGCCAATGAGGAAGACGGCAATGGTGACGA
JMFF020F14+ CGCCGGAGGCGTGGCCGATGTCGGCGGCGAAGCCAATGAGGAAGACGGCAATGGTGACGA
____________________________________________________________
consensus CGCCGGAGGCGTGGCCGATGTCGGCGGCGAAGCCAATGAGGAAGACGGCAATGGTGACGA
. : . : . : . : . : . :
JMFF050P20+ GGGAGGCGCCGGCGGCGATGAAGGGGCGGCGGCGGCCGAAGCGGGAGGTGCAGTTGTCGC
JMFF020F14+ GGGAGGCGCCGGCGGCGATGAAGGGGCGGCGGCGGCCGAAGCGGGAGGTGCAGTTGTCGC
____________________________________________________________
consensus GGGAGGCGCCGGCGGCGATGAAGGGGCGGCGGCGGCCGAAGCGGGAGGTGCAGTTGTCGC
. : . : . : . : . : . :
JMFF050P20+ TGTAATAGCCGACCATGGGCTGCACAATCATGCCGGAGATAGGGCCGCAGAGCCAGATTA
JMFF020F14+ TGTAATAGCCGACCATGGGCTGCACAATCATGCCGGAGATAGGGCCGCAGAGCCAGATTA
____________________________________________________________
consensus TGTAATAGCCGACCATGGGCTGCACAATCATGCCGGAGATAGGGCCGCAGAGCCAGATTA
. : . : . : . : . : . :
JMFF050P20+ AGGGGGCGTATTGGTGCTTGATGCCCAAGAGCTGCACGTAAGGGGTGAGGAGCGAGAGCT
JMFF020F14+ AGGGGGCGTATTGGTGCTTGATGCCCAAGAGCTGCACGTAAGGGGTGAGGAGCGAGAGCT
____________________________________________________________
consensus AGGGGGCGTATTGGTGCTTGATGCCCAAGAGCTGCACGTAAGGGGTGAGGAGCGAGAGCT
. : . : . : . : . : . :
JMFF050P20+ GGATGGCCCACCCGAATTGGACGCCGGCGGCGATCGCCGCCACCATTATGATCTTCCACA
JMFF020F14+ GGATGGCCCACCCGAATTGGACGCCGGCGGCGATCGCCGCCACCATTATGATCTTCCACA
____________________________________________________________
consensus GGATGGCCCACCCGAATTGGACGCCGGCGGCGATCGCCGCCACCATTATGATCTTCCACA
. : . : . : . : . : . :
JMFF050P20+ GCCGCGTCTGCGGCGGCGCCGCCGGAGCGGCTGCTTGGTGGAGTTGCAGAGAGGATTTGT
JMFF020F14+ GCCGCGTCTGCGGCGGCGCCGCCGGAGCGGCTGCTTGGTGGAGTTGCAGAGAGGATTTGT
____________________________________________________________
consensus GCCGCGTCTGCGGCGGCGCCGCCGGAGCGGCTGCTTGGTGGAGTTGCAGAGAGGATTTGT
. : . : . : . : . : . :
JMFF050P20+ TTGTTTGTTTGGTTTTCATGCCACCGTTCTCCATCGCAATT
JMFF020F14+ TTGTTTGTTTGGTTTTCATGCCACCGTTCTCCATCGCAATTCTCTCTCTTTCAAAAGATT
____________________________________________________________
consensus TTGTTTGTTTGGTTTTCATGCCACCGTTCTCCATCGCAATTCTCTCTCTTTCAAAAGATT
. : . : . : . : . : . :
JMFF020F14+ CTTAGTTTCTATCTATTATAGATACAAAAGTGTGAGGATTTTTCTGGTGAAGTTTGTATT
____________________________________________________________
consensus CTTAGTTTCTATCTATTATAGATACAAAAGTGTGAGGATTTTTCTGGTGAAGTTTGTATT