Contig 003148:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020A08Sequence597003148 (3)ref|XP_004230720.1|167PREDICTED: uncharacterized protein LOC101246672 [Solanum lycopersicum]755013792 (3)ref|XP_004230720.1|331PREDICTED: uncharacterized protein LOC101246672 [Solanum lycopersicum]
JMFF041H04Sequence657003148 (3)ref|XP_009772043.1|190PREDICTED: uncharacterized protein LOC104222508 [Nicotiana sylvestris]612013792 (3)ref|XP_009772043.1|257PREDICTED: uncharacterized protein LOC104222508 [Nicotiana sylvestris]
JMSF016N05Sequence494003148 (3)ref|XP_006346337.1|98.6PREDICTED: uncharacterized protein LOC102595644 [Solanum tuberosum]781013792 (3)ref|XP_004230720.1|334PREDICTED: uncharacterized protein LOC101246672 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF041H04+                                    TTCAAATTCATTTCTGATAAGCTGCGTGTCTTCTC
                      ____________________________________________________________
consensus                                      TTCAAATTCATTTCTGATAAGCTGCGTGTCTTCTC
 
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JMFF041H04+           CTTCAGATTTGAAATCTTCAGGTTTTTGTTTATCACCATGTTTATCATATATTTCAAGGT
                      ____________________________________________________________
consensus             CTTCAGATTTGAAATCTTCAGGTTTTTGTTTATCACCATGTTTATCATATATTTCAAGGT
 
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JMFF041H04+           TTCTTTCAAGACAAAGCCTGTATTCAGCATTCCGCAGTGTGTACCCAGTCATCATAGAAG
JMFF020A08+              TTTCAAGACAAAGCCTGTATTCAGCATTCCGCAGTGTGTACCCAGTCATCATAGAAG
                      ____________________________________________________________
consensus             TTCTTTCAAGACAAAGCCTGTATTCAGCATTCCGCAGTGTGTACCCAGTCATCATAGAAG
 
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JMFF041H04+           AGACCAACAATTTGGAGAGTGGTTCCCATAATGCTTCAATAAGAACCTGAAATTGGTCAG
JMSF016N05+                                                         CTGAAATTGGTCAG
JMFF020A08+           AGACCAACAATTTGGAGAGTGGTTCCCATAATGCTTCAATAAGAACCTGAAATTGGTCAG
                      ____________________________________________________________
consensus             AGACCAACAATTTGGAGAGTGGTTCCCATAATGCTTCAATAAGAACCTGAAATTGGTCAG
 
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JMFF041H04+           ATGGAAGCAATCCCAGCATGCCTGATATAGTTCTCTTCATGGCATCTATGGTAGTGAGGG
JMSF016N05+           ATGGAAGCAATCCCAGCATGCCTGATATAGTTCTCTTCATGGCATCTATGGTAGTGAGGG
JMFF020A08+           ATGGAAGCAATCCCAGCATGCCTGATATAGTTCTCTTCATGGCATCTATGGTAGTGAGGG
                      ____________________________________________________________
consensus             ATGGAAGCAATCCCAGCATGCCTGATATAGTTCTCTTCATGGCATCTATGGTAGTGAGGG
 
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JMFF041H04+           GAACATCTTTTTGTATAAGACTAACATCCAAAGGCTCTATATCTTGTATCAAATTTGAGA
JMSF016N05+           GAACATCTTTTTGTATAAGACTAACATCCAAAGGCTCTATATCTTGTATCAAATTTGAGA
JMFF020A08+           GAACATCTTTTTGTATAAGACTAACATCCAAAGGCTCTATATCTTGTATCAAATTTGAGA
                      ____________________________________________________________
consensus             GAACATCTTTTTGTATAAGACTAACATCCAAAGGCTCTATATCTTGTATCAAATTTGAGA
 
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JMFF041H04+           TGCCTGATTTCTTCGATTGAGAATTTTGATGGCCGGCAGTGAAATCGTCGGAGGAAGAAG
JMSF016N05+           TGCCTGATTTCTTCGATTGAGAATTTTGATGGCCGGCAGTGAAATCGTCGGAGGAAGAAG
JMFF020A08+           TGCCTGATTTCTTCGATTGAGAATTTTGATGGCCGGCAGTGAAATCGTCGGAGGAAGAAG
                      ____________________________________________________________
consensus             TGCCTGATTTCTTCGATTGAGAATTTTGATGGCCGGCAGTGAAATCGTCGGAGGAAGAAG
 
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JMFF041H04+           CTGAAGCAGCGAAAACCACAGTGGTTTTGAAGATACGAGGTTTATCAGACGGTTTGGTGA
JMSF016N05+           CTGAAGCAGCGAAAACCACAGTGGTTTTGAAGATACGAGGTTTATCAGACGGTTTGGTGA
JMFF020A08+           CTGAAGCAGCGAAAACCACAGTGGTTTTGAAGATACGAGGTTTATCAGACGGTTTGGTGA
                      ____________________________________________________________
consensus             CTGAAGCAGCGAAAACCACAGTGGTTTTGAAGATACGAGGTTTATCAGACGGTTTGGTGA
 
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JMFF041H04+           ATCGAAGAGAATAGAAAGGCGCGGAAAGGGAAGAAGAGTGCGACAGCGAAGGGCGTGGCG
JMSF016N05+           ATCGAAGAGAATAGAAAGGCGCGGAAAGGGAAGAAGAGTGCGACAGCGAAGGGCGTGGCG
JMFF020A08+           ATCGAAGAGAATAGAAAGGCGCGGAAAGGGAAGAAGAGTGCGACAGCGAAGGGCGTGGCG
                      ____________________________________________________________
consensus             ATCGAAGAGAATAGAAAGGCGCGGAAAGGGAAGAAGAGTGCGACAGCGAAGGGCGTGGCG
 
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JMFF041H04+           GGGCAAGATAAGACCGGGAAAAGAGCGCGGAGAAGGAAGAGGAGTATAAGGCTGCCGCCA
JMSF016N05+           GGGCAAGATAAGACCGGGAAAAGAGCGCGGAGAAGGAAGAGGAGTATAAGGCTGCCGCCA
JMFF020A08+           GGGCAAGATAAGACCGGGAAAAGAGCGCGGAGAAGGAAGAGGAGTATAAGGCTGCCGCCA
                      ____________________________________________________________
consensus             GGGCAAGATAAGACCGGGAAAAGAGCGCGGAGAAGGAAGAGGAGTATAAGGCTGCCGCCA
 
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JMFF041H04+           TCGACAACCTCCGGCGCCGCCGCTCTTATTCTCTTCGCCACCTCCGGCTTCGTCTCGGCG
JMSF016N05+           TCGACAACCTCCGGCGCCGCCGCTCTTATTCTCTTCGCCACCTCCGGCTTCGTCTCGGCG
JMFF020A08+           TCGACAACCTCCGGCGCCGCCGCTCTTATTCTCTTCGCCACCTCCGGCTTCGTCTCGGCG
                      ____________________________________________________________
consensus             TCGACAACCTCCGGCGCCGCCGCTCTTATTCTCTTCGCCACCTCCGGCTTCGTCTCGGCG
 
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JMFF041H04+           GTTGCACCGAGTTGTTC                                           
JMSF016N05+           GTTGCACCGAGTTGTTCAGCTCGTGGCCACAGACCACGATTACGTGAATATCAAAGATCC
JMFF020A08+           GTTGCACCGAGTTGTTCAGCTCGTGGCCACAGACCACGATTACGTGAATATCAAAGATCC
                      ____________________________________________________________
consensus             GTTGCACCGAGTTGTTCAGCTCGTGGCCACAGACCACGATTACGTGAATATCAAAGATCC