Contig 003144:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           GCTGCTGGAAAAACCGCGAATTCAACGCAGCCGCCGCCGTTGTCGGCACCGCCATCTCAT
                      ____________________________________________________________
consensus             GCTGCTGGAAAAACCGCGAATTCAACGCAGCCGCCGCCGTTGTCGGCACCGCCATCTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           GAGGAGCGGCCGCCGCGAAGCTCCAGACCTGTCCAAAGTCCGGCCGAGCCGGAAGCGCCC
                      ____________________________________________________________
consensus             GAGGAGCGGCCGCCGCGAAGCTCCAGACCTGTCCAAAGTCCGGCCGAGCCGGAAGCGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           AGAACCCTGCTGCGGCCGAGCCCACAACCGTGGCCGCGCCCGCGACATCCTCCTTGTTCC
                      ____________________________________________________________
consensus             AGAACCCTGCTGCGGCCGAGCCCACAACCGTGGCCGCGCCCGCGACATCCTCCTTGTTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           CGCCGTCGTCCAGACCATCCTCCTCGGCCCGCAGCCGCTTCCCGAGAATGAAGGGCGCGG
                      ____________________________________________________________
consensus             CGCCGTCGTCCAGACCATCCTCCTCGGCCCGCAGCCGCTTCCCGAGAATGAAGGGCGCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           GAGCCATGGGCTTGTGGTCGAACGAGGCCGATAGAGAAGGGGCGGTGGAGGAGGAGGTCC
                      ____________________________________________________________
consensus             GAGCCATGGGCTTGTGGTCGAACGAGGCCGATAGAGAAGGGGCGGTGGAGGAGGAGGTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           TGAGGGAGGCGGAAATAGTGGAGAAACTCGCCGGGATAGTTCCGGTGCCGGTGGCGGCTA
                      ____________________________________________________________
consensus             TGAGGGAGGCGGAAATAGTGGAGAAACTCGCCGGGATAGTTCCGGTGCCGGTGGCGGCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           TAATGGAAGGCTCAGCTTGGCGGAGAAGCCACTCGATGGTCTGGCCGTCGGACTTGTGAC
                      ____________________________________________________________
consensus             TAATGGAAGGCTCAGCTTGGCGGAGAAGCCACTCGATGGTCTGGCCGTCGGACTTGTGAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           CGAGCTCCCGCGTGAGCTGGAAAACTCTAGCGGCGCAAACGATGGGCATCCGTATGCGCC
                      ____________________________________________________________
consensus             CGAGCTCCCGCGTGAGCTGGAAAACTCTAGCGGCGCAAACGATGGGCATCCGTATGCGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           TCCCCCGGCCGTCGACCTTGCTATGGCGGTCCTTAGCGGGCGGTTTCTTGACTACTACTG
JMSF014M10+                                                                   ACTG
JMFF018I10+           TCCCCCGGCCGTNGNCCTTGNTATGGCGGTCCTTAGCGGGCGGTTTNTTGACTNCTNCTG
                      ____________________________________________________________
consensus             TCCCCCGGCCGTCGACCTTGCTATGGCGGTCCTTAGCGGGCGGTTTCTTGACTACTACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           CCAAAGACCCATTCCCGGCGGAAGGGAGCTGTTGCGGGTCGATTAAAGCTCCGGCGTTGG
JMSF014M10+           CCAAAGACCCATTCCCNGCGGAANGGAGCTGTTGCGNNTCGATTAAAGCTCCGGCGTTGG
JMFF018I10+           CCAAAGACCCNTTCCCGGCGGAAGGGAGCTGTTGCGGGTNGANTAAAGCTCCGGCGTTGG
                      ____________________________________________________________
consensus             CCAAAGACCCATTCCCGGCGGAAGGGAGCTGTTGCGGGTCGATTAAAGCTCCGGCGTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN041C12+           CCTCCA                                                      
JMSF014M10+           CCTCCANCGNCGTCGACATTGGCCGGGTGAAAAGAAGCGGNTAATC              
JMFF018I10+           CCTCCCCCGACGTNGACNTTGGGCGGGTGAAAAGAAGCGGATAANGAGGGAGGGAGGGTA
                      ____________________________________________________________
consensus             CCTCCACCGACGTCGACATTGGGCGGGTGAAAAGAAGCGGATAATGAGGGAGGGAGGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF018I10+           TGAAAGGAGAAAAAAAGAAGGGAAAAAAAAAACCAGAGAGAAGAAGGGAAACAGGGTTCT
                      ____________________________________________________________
consensus             TGAAAGGAGAAAAAAAGAAGGGAAAAAAAAAACCAGAGAGAAGAAGGGAAACAGGGTTCT