Contig 003140:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017J21Sequence637003140 (3)ref|NP_001236831.1|2e-58uncharacterized protein LOC100305798 [Glycine max] ref|XP_003552522.1| PREDICTED633003140 (3)ref|NP_001236831.1|2e-58uncharacterized protein LOC100305798 [Glycine max] ref|XP_003552522.1| PREDICTED
JMFN005J04Sequence586003140 (3)ref|NP_001236831.1|2e-58uncharacterized protein LOC100305798 [Glycine max] ref|XP_003552522.1| PREDICTED

Alignment

This contig is upended


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JMFN005J04+                                                                   ATCA
                      ____________________________________________________________
consensus                                                                     ATCA
 
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JMFN005J04+           AAATCAATATGATGTATAATTGTGGGATCAAATTAACAAAAGCGACACAGCATCAAACCA
                      ____________________________________________________________
consensus             AAATCAATATGATGTATAATTGTGGGATCAAATTAACAAAAGCGACACAGCATCAAACCA
 
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JMFN005J04+           TTTAACTTAGAATGACAGGTTCTATATAGTTCTTCCTAACAGAAAAGCAAATTGGAAAGT
                      ____________________________________________________________
consensus             TTTAACTTAGAATGACAGGTTCTATATAGTTCTTCCTAACAGAAAAGCAAATTGGAAAGT
 
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JMFN005J04+           ATTGCAACAACCACTTGGCTGTGCACAATTTGTAACAATCTCAATTCCTAAATTTTTCTG
                      ____________________________________________________________
consensus             ATTGCAACAACCACTTGGCTGTGCACAATTTGTAACAATCTCAATTCCTAAATTTTTCTG
 
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JMFN005J04+           AAACACGTAATCTGAATTCTAAGGATCGCAATTTCAGTTCTTGCCAGCTTGCTTTTCTTT
rJMFF017J21-                                          TTCAGTTCTTGCCAGCTTGCTTTTCTTT
JMFF017J21+                                           TTCAGTTCTTGCCAGCTTGCTTTTCTTT
                      ____________________________________________________________
consensus             AAACACGTAATCTGAATTCTAAGGATCGCAATTTCAGTTCTTGCCAGCTTGCTTTTCTTT
 
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JMFN005J04+           TGCTTTTTGGATCTTCAAAACTTTCTTCACAATCTTCTGCTCTTCTACCAAGAAAGCTCG
rJMFF017J21-          TGCTTTTTGGATCTTCAAAACTTTCTTCACAATCTTCTGCTCTTCTACCAAGAAAGCTCG
JMFF017J21+           TGCTTTTTGGATCTTCAAAACTTTCTTCACAATCTTCTGCTCTTCTACCAAGAAAGCTCG
                      ____________________________________________________________
consensus             TGCTTTTTGGATCTTCAAAACTTTCTTCACAATCTTCTGCTCTTCTACCAAGAAAGCTCG
 
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JMFN005J04+           AATAATCCTCTCTCTCACAGCCCCACCAGACAATACACCACCATAGGGTCGGTTAACAGT
rJMFF017J21-          AATAATCCTCTCTCTCACAGCCCCACCAGACAATACACCACCATAGGGTCGGTTAACAGT
JMFF017J21+           AATAATCCTCTCTCTCACAGCCCCACCAGACAATACACCACCATAGGGTCGGTTAACAGT
                      ____________________________________________________________
consensus             AATAATCCTCTCTCTCACAGCCCCACCAGACAATACACCACCATAGGGTCGGTTAACAGT
 
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JMFN005J04+           TCTCCTATTCCTAGGTAATCTGGACCTCTTGTACTCAGCAGGTCTCAAGTGCGGGATCCC
rJMFF017J21-          TCTCCTATTCCTAGGTAATCTGGACCTCTTGTACTCAGCAGGTCTCAAGTGCGGGATCCC
JMFF017J21+           TCTCCTATTCCTAGGTAATCTGGACCTCTTGTACTCAGCAGGTCTCAAGTGCGGGATCCC
                      ____________________________________________________________
consensus             TCTCCTATTCCTAGGTAATCTGGACCTCTTGTACTCAGCAGGTCTCAAGTGCGGGATCCC
 
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JMFN005J04+           TTGAATCCTCTTCCCAGTAACAGGACACTTTGGTCCACTAGCCCTCTTCTTCGTGGTCTG
rJMFF017J21-          TTGAATCCTCTTCCCAGTAACAGGACACTTTGGTCCACTAGCCCTCTTCTTCGTGGTCTG
JMFF017J21+           TTGAATCCTCTTCCCAGTAACAGGACACTTTGGTCCACTAGCCCTCTTCTTCGTGGTCTG
                      ____________________________________________________________
consensus             TTGAATCCTCTTCCCAGTAACAGGACACTTTGGTCCACTAGCCCTCTTCTTCGTGGTCTG
 
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JMFN005J04+           ATACACCAGCTTCCCACCAGGGGTTTTCACGACGCGGTGCTGGTTGGACTTGGTGGCATA
rJMFF017J21-          ATACACCAGCTTCCCACCAGGGGTTTTCACGACGCGGTGCTGGTTGGACTTGGTGGCATA
JMFF017J21+           ATACACCAGCTTCCCACCAGGGGTTTTCACGACGCGGTGCTGGTTGGACTTGGTGGCATA
                      ____________________________________________________________
consensus             ATACACCAGCTTCCCACCAGGGGTTTTCACGACGCGGTGCTGGTTGGACTTGGTGGCATA
 
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JMFN005J04+           GCTATGGCGTTTCCGGTAAGTGAGACGCTGCACCAT                        
rJMFF017J21-          GCTATGGCGTTTCCGGTAAGTGAGACGCTGCACCATCTTCGGAACTCCTTCCGGCCTCCG
JMFF017J21+           GCTATGGCGTTTCCGGTAAGTGAGACGCTGCACCATCTTCGGAACTCCTTCCGGCCTCCG
                      ____________________________________________________________
consensus             GCTATGGCGTTTCCGGTAAGTGAGACGCTGCACCATCTTCGGAACTCCTTCCGGCCTCCG
 
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rJMFF017J21-          CAATACAGATAGAAGCTGAAGAGAGGAGGCTAGGAAGCAGGTTAACTGTAAAGTGTAAAG
JMFF017J21+           CAATACAGATAGAAGCTGAAGAGAGGAGGCTAGGAAGCAGGTTAACTGTAAAGTGTAAAG
                      ____________________________________________________________
consensus             CAATACAGATAGAAGCTGAAGAGAGGAGGCTAGGAAGCAGGTTAACTGTAAAGTGTAAAG