Contig 003137:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017B11Sequence542003137 (5)ref|XP_009773558.1|236PREDICTED: uncharacterized protein LOC104223757 [Nicotiana sylvestris]701003137 (5)ref|XP_008369592.1|250PREDICTED: uncharacterized protein LOC103433138 [Malus domestica]
JMFF022H04Sequence111003137 (5)ref|XP_009359840.1|67.4PREDICTED: uncharacterized protein LOC103950369 [Pyrus x bretschneideri]
JMFN006C18Sequence563003137 (5)ref|XP_002273831.1|183PREDICTED: uncharacterized protein LOC100250485 [Vitis vinifera]
JMFS044A07Sequence525003137 (5)ref|XP_002273831.1|149PREDICTED: uncharacterized protein LOC100250485 [Vitis vinifera]

Alignment

This contig is upended


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JMFS044A07+                 GAAAATAGGATAGTCTCGGTTGCTAATTTCCTTGAAATAAGAAGTGGTTTTAAC
JMFN006C18+                            AGTCTCGGTTGCTAATTTCCTTGAAATAAGAAGTGGTTTTAAC
rJMFF017B11-                                         ATTTCCTTGGAATAAGAAGTGGTTTTAAC
                      ____________________________________________________________
consensus                   GAAAATAGGATAGTCTCGGTTGCTAATTTCCTTGAAATAAGAAGTGGTTTTAAC
 
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JMFS044A07+           TAGTCTGCAGAAATCATCTAATTTGAAATATTAAAACACAAAATGATTGGCAATGTGGAA
JMFN006C18+           TAGTCTGCAGAAATCATCTAATTTGAAATATTAAAACACAAAATGATTGGCAATGTGGAA
rJMFF017B11-          TAGTCTGCAGAAATCATCTAATTTGAAATATTAAAACACAAAATGATTGGCAATGTGGAA
                      ____________________________________________________________
consensus             TAGTCTGCAGAAATCATCTAATTTGAAATATTAAAACACAAAATGATTGGCAATGTGGAA
 
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JMFS044A07+           ACTTGGAAGGGTGAAAGGCTCATCTCTTGCCTCTATGTGTGACTTTGCTTGCTTCTCTAC
JMFN006C18+           ACTTGGAAGGGTGAAAGGCTCATCTCTTGCCTCTATGTGTGACTTTGCTTGCTTCTCTAC
rJMFF017B11-          ACTTGGAAGGGTGAAAGGCTCATCTCTTGCCTCTATGTGTGACTTTGCTTGCTTCTCTAC
                      ____________________________________________________________
consensus             ACTTGGAAGGGTGAAAGGCTCATCTCTTGCCTCTATGTGTGACTTTGCTTGCTTCTCTAC
 
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JMFS044A07+           TAGCTGTTGTTTTACTAGACTGAACAGATTTAACATCATCCTTATCCTCGCTTGAAATGC
JMFN006C18+           TAGCTGTTGTTTTACTAGACTGAACAGATTTAACATCATCCTTATCCTCGCTTGAAATGC
rJMFF017B11-          TAGCTGTTGTTTTACTAGACTGAACAGATTTAATATCATCCTTATCATCGCTTGAAATGC
                      ____________________________________________________________
consensus             TAGCTGTTGTTTTACTAGACTGAACAGATTTAACATCATCCTTATCCTCGCTTGAAATGC
 
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JMFS044A07+           CTTCATCAGCAGCGATATCCTTGGAGTACTTTTTAACCCGCAAGGAAATGAGGATGCTGG
JMFN006C18+           CTTCATCAGCAGCGATATCCTTGGAGTACTTTTTAACCCGCAAGGAAATGAGGATGCTGG
rJMFF017B11-          CTTCATCAGCAGCGATATCCTTGGAGTACTTTTTAACCCGCAAGGAAATGAGGATGCTGG
                      ____________________________________________________________
consensus             CTTCATCAGCAGCGATATCCTTGGAGTACTTTTTAACCCGCAAGGAAATGAGGATGCTGG
 
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JMFS044A07+           AAAAGATACCAAGAACCGGGAAGATATAAGACCAGACCTGAGATTTTCGTGACCCAGATG
JMFN006C18+           AAAAGATACCAAGAACCGGGAAGATATAAGACCAGACCTGAGATTTTCGTGACCCAGATG
rJMFF017B11-          AAAAGATACCAAGAACCGGGAAGATATAAGACCAGACCTGAGATTTTCGTGACCCAGATG
                      ____________________________________________________________
consensus             AAAAGATACCAAGAACCGGGAAGATATAAGACCAGACCTGAGATTTTCGTGACCCAGATG
 
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JMFS044A07+           CAGAAGCCATAGCAGCACCGGCAAGACTACCAATTGACGTGTTCTGCAAGATCATAGGCA
JMFN006C18+           CAGAAGCCATAGCAGCACCGGCAAGACTACCAATTGACGTGTTCTGCAAGATCATAGGCA
rJMFF017B11-          CAGAAGCCATAGCAGCACCGGCAAGACTACCAATTGACGTGTTCTGCAAGATCATAGGCA
                      ____________________________________________________________
consensus             CAGAAGCCATAGCAGCACCGGCAAGACTACCAATTGACGTGTTCTGCAAGATCATAGGCA
 
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JMFS044A07+           GGCAGCCAACTGCCGTAGGCAGAAGAAAATCCAAAAGGAACCTGACTCTCGTTGCCGCTA
JMFN006C18+           GGCAGCCAACTGCCGTAGGCAGAAGAAAATCCAAAAGGAACCTGACTCTCGTTGCCGCTA
rJMFF017B11-          GGCAGCCAACTGCCGTAGGCAGAAGAAAATCCAAAAGGAACCTGACTCTCGTTGCCGCTA
JMFF017B11+                                                                     TA
                      ____________________________________________________________
consensus             GGCAGCCAACTGCCGTAGGCAGAAGAAAATCCAAAAGGAACCTGACTCTCGTTGCCGCTA
 
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JMFS044A07+           GTGCATAGTTGATAATGTACGAGGGTATAGGTGAGAAGCGGGCAAGAAGAA         
JMFN006C18+           GTGCATAGTTGATAATGTACGAGGGTATAGGTGAGAAGCGGGCAAGAAGAACGAACCTCC
rJMFF017B11-          GTGCATAGTTGATAATGTACGAGGGTATAGGTGAGAAGCGGGCAAGAAGAACGAACCTCC
JMFF017B11+           GTGCATAGTTGATAATGTACGAGGGTATAGGTGAGAAGCGGGCAAGAAGAACGAACCTCC
                      ____________________________________________________________
consensus             GTGCATAGTTGATAATGTACGAGGGTATAGGTGAGAAGCGGGCAAGAAGAACGAACCTCC
 
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JMFN006C18+           ATCCATCCCGCTCAACTCCCCTAGAAAGCACATTAAAGTA                    
rJMFF017B11-          ATCCATCCCGCTCAACTCCCCTAGAAAGCACATTAAAGTATTTGTTGCTGTGGGCCCAGT
rJMFF022H04-                                              AGTATTTGTTGCTGTGGGCCCAGT
JMFF017B11+           ATCCATCCCGCTCAACTCCCCTAGAAAGCACATTAAAGTATTTGTTGCTGTGGGCCCAGT
                      ____________________________________________________________
consensus             ATCCATCCCGCTCAACTCCCCTAGAAAGCACATTAAAGTATTTGTTGCTGTGGGCCCAGT
 
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rJMFF017B11-          TCATAGCGGAGCTAGAACTCTTGAACAAAAGCCTGCCGATCCAGAAAGAGAGGGAGGCGC
rJMFF022H04-          TCATAGCGGAGCTAGAACTCTTGAACAAAAGCCTGCCGATCCAGAAAGAGAGGGAGGCGC
JMFF017B11+           TCATAGCGGAGCTAGAACTCTTGAACAAAAGCCTGCCGATCCAGAAAGAGAGGGAGGCGC
                      ____________________________________________________________
consensus             TCATAGCGGAGCTAGAACTCTTGAACAAAAGCCTGCCGATCCAGAAAGAGAGGGAGGCGC
 
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rJMFF017B11-          CAAGGAGCTTGGCGGCAAAGACGCATAAGACGGCAGGGAAGAATCCGAAGAGGAAAGAGG
rJMFF022H04-          CAAGGAGCTTGGCGGCAAAGACGCAT                                  
JMFF017B11+           CAAGGAGCTTGGCGGCAAAGACGCATAAGACGGCAGGGAAGAATCCGAAGAGGAAAGAGG
                      ____________________________________________________________
consensus             CAAGGAGCTTGGCGGCAAAGACGCATAAGACGGCAGGGAAGAATCCGAAGAGGAAAGAGG
 
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rJMFF017B11-          CGCCGGCCTCG                                                 
JMFF017B11+           CGCCGGCCTCGAAGAAGACGGCATAGGGCAGGCAAAGCGCAAGTGTGACGGTGTGTAGGC
                      ____________________________________________________________
consensus             CGCCGGCCTCGAAGAAGACGGCATAGGGCAGGCAAAGCGCAAGTGTGACGGTGTGTAGGC
 
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JMFF017B11+           CAATATAGGCCGGGATCGCCCAGCATCCCAGCCGATCAGACATTTGCTTAAACCAATCAA
                      ____________________________________________________________
consensus             CAATATAGGCCGGGATCGCCCAGCATCCCAGCCGATCAGACATTTGCTTAAACCAATCAA
 
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JMFF017B11+           AAGCAGCGTCCTTGTCCACCTCCCACCCATACTGCTTGCTCAGAGCCCTCACCGCCACCG
                      ____________________________________________________________
consensus             AAGCAGCGTCCTTGTCCACCTCCCACCCATACTGCTTGCTCAGAGCCCTCACCGCCACCG
 
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JMFF017B11+           CTATCCCCACCACCGCCGCTATCGTCCCCCATTTTCCTCCCAATCCCATTTCCAAATTGA
                      ____________________________________________________________
consensus             CTATCCCCACCACCGCCGCTATCGTCCCCCATTTTCCTCCCAATCCCATTTCCAAATTGA
 
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JMFF017B11+           GACGACCTCGTATTCGTAGTCCGTTTACCCGTACGAATCGGGACAATGTATTGGCCTATT
                      ____________________________________________________________
consensus             GACGACCTCGTATTCGTAGTCCGTTTACCCGTACGAATCGGGACAATGTATTGGCCTATT