Contig 003136:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016P15Sequence526003136 (3)ref|XP_009785320.1|2e-26PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris]731005387 (2)ref|XP_009617901.1|9e-68PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]
JMFF028E08Sequence559003136 (3)ref|XP_009785320.1|8e-33PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris]727005387 (2)ref|XP_009617901.1|3e-67PREDICTED: uncharacterized protein At1g04910-like [Nicotiana tomentosiformis]
JMFF051I19Sequence615003136 (3)ref|XP_009785320.1|5e-33PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF051I19+                                                      TGCAAATTGTGATCCCT
                      ____________________________________________________________
consensus                                                        TGCAAATTGTGATCCCT
 
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JMFF051I19+           AGCTTGTTAGCCACTTTTCGTCTAGGCTTGCAGTGATTTCTCCAAATCATAGATTTCACC
JMFF028E08+                                                    CCAAATCATAGATTTCACC
                      ____________________________________________________________
consensus             AGCTTGTTAGCCACTTTTCGTCTAGGCTTGCAGTGATTTCTCCAAATCATAGATTTCACC
 
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JMFF051I19+           AAACTTCCTTTTTTGCCCCGATTCAGATTGTCTTATGTTTGGAATGACTAGAGTAGCTCC
JMFF028E08+           AAACTTCCTTTTTTGCCCCGATTCAGATTGTCTTATGTTTGGAATGACTAGAGTAGCTCC
JMFF016P15+                         GCCCCGATTCAGATTGTCTTATGTTTGGAATGACTAGAGTAGCTCC
                      ____________________________________________________________
consensus             AAACTTCCTTTTTTGCCCCGATTCAGATTGTCTTATGTTTGGAATGACTAGAGTAGCTCC
 
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JMFF051I19+           AAGGTATTTAGCAACAACAACGGCTGTAGCAATCTGTGAGACATAATACTCAGGGTCTTG
JMFF028E08+           AAGGTATTTAGCAACAACAACGGCTGTAGCAATCTGTGAGACATAATACTCAGGGTCTTG
JMFF016P15+           AAGGTATTTAGCAACAACAACGGCTGTAGCAATCTGTGAGACATAATACTCAGGGTCTTG
                      ____________________________________________________________
consensus             AAGGTATTTAGCAACAACAACGGCTGTAGCAATCTGTGAGACATAATACTCAGGGTCTTG
 
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JMFF051I19+           TGCCAATGTGACAAATATTAAACCTCTTGATTCTTGTGGTTTCGAATTTGTTGATTTTCT
JMFF028E08+           TGCCAATGTGACAAATATTAAACCTCTTGATTCTTGTGGTTTCGAATTTGTTGATTTTCT
JMFF016P15+           TGCCAATGTGACAAATATTAAACCTCTTGATTCTTGTGGTTTCGAATTTGTTGATTTTCT
                      ____________________________________________________________
consensus             TGCCAATGTGACAAATATTAAACCTCTTGATTCTTGTGGTTTCGAATTTGTTGATTTTCT
 
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JMFF051I19+           CCAACAAGGATTTAATACTTCTTTAGTTTTGTTTAGTCCCCAAGGATCGGATGAGGTAAG
JMFF028E08+           CCAACAAGGATTTAATACTTCTTTAGTTTTGTTTAGTCCCCAAGGATCGGATGAGGTAAG
JMFF016P15+           CCAACAAGGATTTAATACTTCTTTAGTTTTGTTTAGTCCCCAAGGATCGGATGAGGTAAG
                      ____________________________________________________________
consensus             CCAACAAGGATTTAATACTTCTTTAGTTTTGTTTAGTCCCCAAGGATCGGATGAGGTAAG
 
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JMFF051I19+           GAATCGTTTACCAGAAGAAGATTTTGTCCCATTGTTTGGAGTGATGGGTTGTATTGAGAA
JMFF028E08+           GAATCGTTTACCAGAAGAAGATTTTGTCCCATTGTTTGGAGTGATGGGTTGTATTGAGAA
JMFF016P15+           GAATCGTTTACCAGAAGAAGATTTTGTCCCATTGTTTGGAGTGATGGGTTGTATTGAGAA
                      ____________________________________________________________
consensus             GAATCGTTTACCAGAAGAAGATTTTGTCCCATTGTTTGGAGTGATGGGTTGTATTGAGAA
 
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JMFF051I19+           ATTGCCCAAAAGTGGGTCAATATGATCTGTCTTGATCATATTGCATAACATCAGCAGCAT
JMFF028E08+           ATTGCCCAAAAGTGGGTCAATATGATCTGTCTTGATCATATTGCATAACATCAGCAGCAT
JMFF016P15+           ATTGCCCAAAAGTGGGTCAATATGATCTGTCTTGATCATATTGCATAACATCAGCAGCAT
                      ____________________________________________________________
consensus             ATTGCCCAAAAGTGGGTCAATATGATCTGTCTTGATCATATTGCATAACATCAGCAGCAT
 
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JMFF051I19+           GGAAGCAGTCAGGAAACCAGAGAGTATGTGCTTCAAGTCGTATGTTATATTTCTACCCAT
JMFF028E08+           GGAAGCAGTCAGGAAACCAGAGAGTATGTGCTTCAAGTCGTATGTTATATTTCTACCCAT
JMFF016P15+           GGAAGCAGTCAGGAAACCAGAGAGTATGTGCTTCAAGTCGTATGTTATATTTCTACCCAT
                      ____________________________________________________________
consensus             GGAAGCAGTCAGGAAACCAGAGAGTATGTGCTTCAAGTCGTATGTTATATTTCTACCCAT
 
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JMFF051I19+           TTCGCGTTCTCTCTCTCCTCAAATCTAAGTGATTGTTCTTTCTTTTTGTTTTTCTCTCTC
JMFF028E08+           TTCGCGTTCTCTCTCTCCTCAAATCTAAGTGATTGTTCTTTCTTTTTGTTTTTCTCTCTC
JMFF016P15+           TTCGCGTTCTCTCTCTCCTCAAATCTAAGTGATTGTTCTTTCTTTTTGTTTTTCTCTCTC
                      ____________________________________________________________
consensus             TTCGCGTTCTCTCTCTCCTCAAATCTAAGTGATTGTTCTTTCTTTTTGTTTTTCTCTCTC
 
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JMFF051I19+           TCTCTCTCTTTCACTCTCTCTCCCTCCTCAGATCTTAGTGATTGTTTTTCTTTTGTTT  
JMFF028E08+           TCTCTCTCTTTCACTCTCTCTCCCTCCTCAGATCTTAGTGATTGTTTTTCTTTTGTTT  
JMFF016P15+           TCTCTCTCTTTCACTCTCTCTCCCTCCTCAGATCTTAGTGATTGTTTTTCTTTTGTTTTG
                      ____________________________________________________________
consensus             TCTCTCTCTTTCACTCTCTCTCCCTCCTCAGATCTTAGTGATTGTTTTTCTTTTGTTTTG