Contig 003132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006N19Sequence519003132 (5)ref|XP_002304950.2|1e-52hypothetical protein POPTR_0004s01900g, partial [Populus trichocarpa] gb|EEE8546770013674 (4)ref|XP_007026017.1|5e-69Beta glucosidase 46 isoform 1 [Theobroma cacao] gb|EOY28639.1| Beta glucosidase
JMFF016C03Sequence565003132 (5)ref|XP_006468004.1|1e-51PREDICTED: beta-glucosidase 46-like [Citrus sinensis]763013674 (4)ref|XP_006485510.1|1e-50PREDICTED: beta-glucosidase 46-like [Citrus sinensis]
JMFS086F09Sequence601003132 (5)ref|XP_006383935.1|4e-63hypothetical protein POPTR_0004s01890g [Populus trichocarpa] gb|ERP61732.1| hypo
JMFS119D03Sequence633003132 (5)ref|XP_006383935.1|2e-67hypothetical protein POPTR_0004s01890g [Populus trichocarpa] gb|ERP61732.1| hypo
JMSF016M06Sequence546003132 (5)ref|XP_006468004.1|2e-38PREDICTED: beta-glucosidase 46-like [Citrus sinensis]782013674 (4)emb|CBI23186.3|2e-51unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS086F09+ TCCAAAGTCTTCCTGCAGTTTG
JMFS119D03+ GCAAATATCTGCAAAATATCCAAAGTCTTCCTGCAGTTTG
                      ____________________________________________________________
consensus GCAAATATCTGCAAAATATCCAAAGTCTTCCTGCAGTTTG
 
. : . : . : . : . : . :
JMFS086F09+ GGGCTTAGCCATGATTGATATCTGTTCTCGAGTTCTTGAGGGATGTCAAAATGATTCAAC
JMFF006N19+ TTGAGGGATGTCAAAATGATTCAAC
JMFS119D03+ GGGCTTAGCCATGATTGATATCTGTTCTCGAGTTCTTGAGGGATGTCAAAATGATTCAAC
JMFF016C03+ TTGAGGGATGTCAAAATGATTCAAC
                      ____________________________________________________________
consensus GGGCTTAGCCATGATTGATATCTGTTCTCGAGTTCTTGAGGGATGTCAAAATGATTCAAC
 
. : . : . : . : . : . :
JMFS086F09+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
JMFF006N19+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
JMFS119D03+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
JMFF016C03+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
                      ____________________________________________________________
consensus AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
 
. : . : . : . : . : . :
JMFS086F09+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
JMFF006N19+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
JMSF016M06+ TTGGTAATATTCTTGCCCATGAAATT
JMFS119D03+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
JMFF016C03+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
                      ____________________________________________________________
consensus ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
 
. : . : . : . : . : . :
JMFS086F09+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMFF006N19+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMSF016M06+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMFS119D03+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMFF016C03+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
                      ____________________________________________________________
consensus GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
 
. : . : . : . : . : . :
JMFS086F09+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMFF006N19+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMSF016M06+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMFS119D03+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMFF016C03+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
                      ____________________________________________________________
consensus TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
 
. : . : . : . : . : . :
JMFS086F09+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMFF006N19+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMSF016M06+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMFS119D03+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMFF016C03+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
                      ____________________________________________________________
consensus GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
 
. : . : . : . : . : . :
JMFS086F09+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMFF006N19+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMSF016M06+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMFS119D03+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMFF016C03+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
                      ____________________________________________________________
consensus TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
 
. : . : . : . : . : . :
JMFS086F09+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMFF006N19+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMSF016M06+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMFS119D03+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMFF016C03+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
                      ____________________________________________________________
consensus GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
 
. : . : . : . : . : . :
JMFS086F09+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMFF006N19+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMSF016M06+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMFS119D03+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMFF016C03+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
                      ____________________________________________________________
consensus ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
 
. : . : . : . : . : . :
JMFS086F09+ AATTAAACGCACTACACATATACACAAATATACTATACA
JMFF006N19+ AATTAAACGC
JMSF016M06+ AATTAAACGC
JMFS119D03+ AATTAAACGCACTACACATATACACAAATATACTATACATACATTCCACAAAT
JMFF016C03+ AATTAAACGCACTACACATATACACAAATATACTATACATACATTCCACAAATTGCTTTC
                      ____________________________________________________________
consensus AATTAAACGCACTACACATATACACAAATATACTATACATACATTCCACAAATTGCTTTC