| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006N19 | Sequence | 519 | 003132 (5) | ref|XP_002304950.2| | 1e-52 | hypothetical protein POPTR_0004s01900g, partial [Populus trichocarpa] gb|EEE8546 | 770 | 013674 (4) | ref|XP_007026017.1| | 5e-69 | Beta glucosidase 46 isoform 1 [Theobroma cacao] gb|EOY28639.1| Beta glucosidase |
| JMFF016C03 | Sequence | 565 | 003132 (5) | ref|XP_006468004.1| | 1e-51 | PREDICTED: beta-glucosidase 46-like [Citrus sinensis] | 763 | 013674 (4) | ref|XP_006485510.1| | 1e-50 | PREDICTED: beta-glucosidase 46-like [Citrus sinensis] |
| JMFS086F09 | Sequence | 601 | 003132 (5) | ref|XP_006383935.1| | 4e-63 | hypothetical protein POPTR_0004s01890g [Populus trichocarpa] gb|ERP61732.1| hypo | |||||
| JMFS119D03 | Sequence | 633 | 003132 (5) | ref|XP_006383935.1| | 2e-67 | hypothetical protein POPTR_0004s01890g [Populus trichocarpa] gb|ERP61732.1| hypo | |||||
| JMSF016M06 | Sequence | 546 | 003132 (5) | ref|XP_006468004.1| | 2e-38 | PREDICTED: beta-glucosidase 46-like [Citrus sinensis] | 782 | 013674 (4) | emb|CBI23186.3| | 2e-51 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMFS086F09+ TCCAAAGTCTTCCTGCAGTTTG
JMFS119D03+ GCAAATATCTGCAAAATATCCAAAGTCTTCCTGCAGTTTG
____________________________________________________________
consensus GCAAATATCTGCAAAATATCCAAAGTCTTCCTGCAGTTTG
. : . : . : . : . : . :
JMFS086F09+ GGGCTTAGCCATGATTGATATCTGTTCTCGAGTTCTTGAGGGATGTCAAAATGATTCAAC
JMFF006N19+ TTGAGGGATGTCAAAATGATTCAAC
JMFS119D03+ GGGCTTAGCCATGATTGATATCTGTTCTCGAGTTCTTGAGGGATGTCAAAATGATTCAAC
JMFF016C03+ TTGAGGGATGTCAAAATGATTCAAC
____________________________________________________________
consensus GGGCTTAGCCATGATTGATATCTGTTCTCGAGTTCTTGAGGGATGTCAAAATGATTCAAC
. : . : . : . : . : . :
JMFS086F09+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
JMFF006N19+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
JMFS119D03+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
JMFF016C03+ AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
____________________________________________________________
consensus AGGACAAATGGTTGAATGCCTTTTAGCAGCAGGGCATCAATGAGGTTGTTATAGTAGTTG
. : . : . : . : . : . :
JMFS086F09+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
JMFF006N19+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
JMSF016M06+ TTGGTAATATTCTTGCCCATGAAATT
JMFS119D03+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
JMFF016C03+ ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
____________________________________________________________
consensus ATCCCACCTATGTTTATGTTTCCATATCTTCCCTTTGGTAATATTCTTGCCCATGAAATT
. : . : . : . : . : . :
JMFS086F09+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMFF006N19+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMSF016M06+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMFS119D03+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
JMFF016C03+ GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
____________________________________________________________
consensus GAGAATTTGTAGCTGTTCATCCCAAGAGAAGCCATAAGATCTATGTCTTCCTGAAATAGG
. : . : . : . : . : . :
JMFS086F09+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMFF006N19+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMSF016M06+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMFS119D03+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
JMFF016C03+ TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
____________________________________________________________
consensus TGGTACTGATCATCTGCAACATCTCCATTACTTCCATCCTCTATCTTGTCATATTTATGG
. : . : . : . : . : . :
JMFS086F09+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMFF006N19+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMSF016M06+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMFS119D03+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
JMFF016C03+ GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
____________________________________________________________
consensus GTGAAAACGTCCCAGTTACTCAGACCTTTACCATCGGCCAAGTAACCTCCTTCATACTGA
. : . : . : . : . : . :
JMFS086F09+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMFF006N19+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMSF016M06+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMFS119D03+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
JMFF016C03+ TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
____________________________________________________________
consensus TAAGACGAGGAAGCTGTGCCGAAAAGGAAGCCGGACGGGAATGGAGACGGATCGGAGCTC
. : . : . : . : . : . :
JMFS086F09+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMFF006N19+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMSF016M06+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMFS119D03+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
JMFF016C03+ GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
____________________________________________________________
consensus GCCGTTATGGAGCCGAGACGGCAAGACGTCGGAACCGGCGAGAACAGCACCGCCGCCGTC
. : . : . : . : . : . :
JMFS086F09+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMFF006N19+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMSF016M06+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMFS119D03+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
JMFF016C03+ ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
____________________________________________________________
consensus ACAATCAACAGTAGTCTATGATAGAGTGATGAAGAACCTGGCATCGTCACTAAACCTCCA
. : . : . : . : . : . :
JMFS086F09+ AATTAAACGCACTACACATATACACAAATATACTATACA
JMFF006N19+ AATTAAACGC
JMSF016M06+ AATTAAACGC
JMFS119D03+ AATTAAACGCACTACACATATACACAAATATACTATACATACATTCCACAAAT
JMFF016C03+ AATTAAACGCACTACACATATACACAAATATACTATACATACATTCCACAAATTGCTTTC
____________________________________________________________
consensus AATTAAACGCACTACACATATACACAAATATACTATACATACATTCCACAAATTGCTTTC