| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009P15 | Sequence | 542 | 003130 (17) | ref|XP_011097825.1| | 2e-64 | PREDICTED: syntaxin-51-like [Sesamum indicum] | |||||
| JMFF015L20 | Sequence | 569 | 003130 (17) | ref|XP_011097825.1| | 1e-60 | PREDICTED: syntaxin-51-like [Sesamum indicum] | 724 | 003130 (17) | ref|XP_011097825.1| | 4e-109 | PREDICTED: syntaxin-51-like [Sesamum indicum] |
| JMFN003F24 | Sequence | 616 | 003130 (17) | ref|XP_011097825.1| | 7e-85 | PREDICTED: syntaxin-51-like [Sesamum indicum] | |||||
| JMFN011J17 | Sequence | 611 | 003130 (17) | ref|XP_011097825.1| | 5e-80 | PREDICTED: syntaxin-51-like [Sesamum indicum] | |||||
| JMFS084H07 | Sequence | 589 | 003130 (17) | ref|XP_009591371.1| | 6e-67 | PREDICTED: syntaxin-51-like [Nicotiana tomentosiformis] ref|XP_009591379.1| PRED | |||||
| JMSF004N15 | Sequence | 198 | 003130 (17) | ||||||||
| JMSF009N14 | Sequence | 314 | 003130 (17) | ref|XP_011097825.1| | 2e-39 | PREDICTED: syntaxin-51-like [Sesamum indicum] | 788 | 003130 (17) | ref|XP_011097825.1| | 5e-122 | PREDICTED: syntaxin-51-like [Sesamum indicum] |
| JMSF010N14 | Sequence | 690 | 003130 (17) | ref|XP_011097825.1| | 6e-101 | PREDICTED: syntaxin-51-like [Sesamum indicum] | |||||
| JMSF025J15 | Sequence | 691 | 003130 (17) | ref|XP_011097825.1| | 2e-100 | PREDICTED: syntaxin-51-like [Sesamum indicum] | 753 | 003130 (17) | ref|XP_011097825.1| | 2e-121 | PREDICTED: syntaxin-51-like [Sesamum indicum] |
| JMSF028C18 | Sequence | 675 | 003130 (17) | ref|XP_009591371.1| | 2e-72 | PREDICTED: syntaxin-51-like [Nicotiana tomentosiformis] ref|XP_009591379.1| PRED | 755 | 003130 (17) | ref|XP_011097825.1| | 1e-113 | PREDICTED: syntaxin-51-like [Sesamum indicum] |
| JMSF041P06 | Sequence | 780 | 003130 (17) | ref|XP_011097825.1| | 3e-120 | PREDICTED: syntaxin-51-like [Sesamum indicum] | 558 | 003130 (17) | ref|XP_011097825.1| | 7e-83 | PREDICTED: syntaxin-51-like [Sesamum indicum] |
| JMSF042P06 | Sequence | 612 | 003130 (17) | ref|XP_011097825.1| | 2e-90 | PREDICTED: syntaxin-51-like [Sesamum indicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS084H07- GAGAACTAGTCTCGTTTTTTTTTTTTTTTTTTCCTTCAAAAT
____________________________________________________________
consensus GAGAACTAGTCTCGTTTTTTTTTTTTTTTTTTCCTTCAAAAT
. : . : . : . : . : . :
JMFS084H07- AACACACGTGAAATTTTGCATTTTACTCAGAAACTTTGTCCA-GTCCACCAAAGAAACAA
rJMSF025J15- GTCCAGGTCCACCAAAGAAACAA
rJMFF015L20- GTCCACCAAAGAAACAA
rJMSF010N14- GTCCACCAAAGAAACAA
rJMSF041P06- AGAAACAA
rJMSF042P06- GTCCAGGTCCACCAAAGAAACAA
rJMSF028C18- GTCCAGGTCCACCAAAGAAACAA
rJMSF009N14- ATTTTGCATTTTACTCAGAAACTTTGTCCAGGTCCACCAAAGAAACAA
____________________________________________________________
consensus AACACACGTGAAATTTTGCATTTTACTCAGAAACTTTGTCCAGGTCCACCAAAGAAACAA
. : . : . : . : . : . :
JMFS084H07- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
rJMSF025J15- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
rJMFF015L20- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
rJMSF010N14- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
rJMSF041P06- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
rJMSF042P06- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
rJMSF028C18- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
rJMSF009N14- ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
____________________________________________________________
consensus ATAGCAAGACAGACACATTCCATAAGGAACAACTAAACAAGATACAATCACGGCCGCCCT
. : . : . : . : . : . :
JMFS084H07- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
rJMSF025J15- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
rJMFF015L20- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
rJMSF010N14- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
rJMSF041P06- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
rJMSF042P06- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
rJMSF028C18- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
rJMSF009N14- GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
____________________________________________________________
consensus GGCCAATATTAAGTTATTCCATACACAGGCAAAGATGCGTGTCAAACTGTAAAATACAAG
. : . : . : . : . : . :
JMFS084H07- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
rJMSF025J15- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
rJMFF015L20- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
rJMSF010N14- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
rJMSF041P06- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
rJMSF042P06- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
rJMSF028C18- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
rJMSF009N14- CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
____________________________________________________________
consensus CTTCGGCATTACAAGAATTTGAACAGCATATATATCACTGCGATCAGAACCACAATCCCA
. : . : . : . : . : . :
JMFS084H07- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
rJMSF025J15- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
rJMFF015L20- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
rJMSF010N14- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
rJMSF041P06- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
rJMSF042P06- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
rJMSF028C18- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
rJMSF009N14- ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
____________________________________________________________
consensus ATGACTGACATAAGCATGCACATGCAGGAGCACCCACCCTTTGTGCGCTTGTTTAAAATT
. : . : . : . : . : . :
JMFS084H07- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
rJMSF025J15- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
rJMFF015L20- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
rJMSF010N14- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
rJMSF041P06- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
rJMSF042P06- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
rJMSF028C18- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
rJMSF009N14- GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
JMSF041P06+ TGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
____________________________________________________________
consensus GCAAGCCTCTTTTGTACTCGCTGTAGACGGGAGTCTGTAACATCAACATGTTCGTCCAGG
. : . : . : . : . : . :
JMFS084H07- TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
rJMSF025J15- TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
rJMFF015L20- TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
rJMSF010N14- TCATCAATGAGTCTTGTTTGCAAGCCAAGCTCTTCATTGACAGCCAATGCAATATGTTTG
rJMSF041P06- TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
rJMSF042P06- TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
rJMSF028C18- TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
rJMSF009N14- TCATCAATGAGTCTTGTTTGCAAGCCAAGCTCTTCATTGACAGCCAATGCAATATGTTTG
JMSF025J15+ AGCCAATGCAATATGTTTG
JMSF028C18+ TTCATTGACAGCCAATGCAATATGTTTG
JMSF041P06+ TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
____________________________________________________________
consensus TCATCAATGAGTCTTGTTTGCAAGCCAAGTTCTTCATTGACAGCCAATGCAATATGTTTG
. : . : . : . : . : . :
JMFS084H07- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGN
rJMSF025J15- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
rJMFF015L20- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
rJMSF010N14- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
rJMSF041P06- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
rJMSF042P06- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
rJMSF028C18- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
rJMSF009N14- GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
JMSF025J15+ GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTNGT
JMSF028C18+ GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTNGT
JMFN003F24+ CTTTCATTATTTGT
JMSF041P06+ GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
____________________________________________________________
consensus GTGCTTATTACTGTCTCCTCCAATTTCTCGAGGCCTTCATCTTGTTCTTTCATTATTTGT
. : . : . : . : . : . :
JMFS084H07- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
rJMSF025J15- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
rJMFF015L20- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
rJMSF010N14- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGTATCAACA
rJMSF041P06- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
rJMSF042P06- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
rJMSF028C18- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
rJMSF009N14- CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGTATCAACA
JMSF025J15+ CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
JMSF028C18+ CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
JMFN011J17+ TGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
JMFN003F24+ CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
JMSF041P06+ CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
____________________________________________________________
consensus CGTTGAAGAGCGACAACGCCAGAATTGTCAAGGCCATTTGTTCTGCTCATGGCATCAACA
. : . : . : . : . : . :
JMFS084H07- GGCTTTAT
rJMSF025J15- GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
rJMFF015L20- GGCTTTATTTCTGGTCCAAGTAAGATGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
rJMSF010N14- GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
rJMSF041P06- GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCANAGTC
rJMSF042P06- GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
rJMSF028C18- GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
rJMSF009N14- GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
JMSF025J15+ GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
JMSF028C18+ GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
JMFN011J17+ GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
JMFN003F24+ GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
JMSF041P06+ GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
JMFF009P15+ TCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
JMFF015L20+ CTATTCGCAAAATTGGACATGTTCAAAGTC
____________________________________________________________
consensus GGCTTTATTTCTGGTCCAAGTAAGCTGTCTCTATTCGCAAAATTGGACATGTTCAAAGTC
. : . : . : . : . : . :
rJMSF025J15- GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
rJMFF015L20- GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
rJMSF010N14- GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
rJMSF041P06- GATGCCATCT
rJMSF042P06- GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCC
rJMSF028C18- GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
rJMSF009N14- GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
JMSF025J15+ GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
JMSF028C18+ GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
JMFN011J17+ GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
JMFN003F24+ GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
JMSF041P06+ GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
JMFF009P15+ GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
JMFF015L20+ GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
____________________________________________________________
consensus GATGCCATCTGATTTGCTTTTGACCTTAAAGTTGCAAGCATGTCCTTGCGTCGATTAATC
. : . : . : . : . : . :
rJMSF025J15- TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
rJMFF015L20- TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
rJMSF010N14- TCTTTCTCAGTCAAAGGTTGCTTTGTAGNAAGTTTGGAC
rJMSF028C18- TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
rJMSF009N14- TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMSF025J15+ TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMSF028C18+ TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMSF009N14+ TCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMFN011J17+ TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMFN003F24+ TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMSF041P06+ TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMFF009P15+ TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
JMFF015L20+ TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
____________________________________________________________
consensus TCTTTCTCAGTCAAAGGTTGCTTTGTAGGAAGTTTGGACAAAAGAGACTCTAAGCTATCA
. : . : . : . : . : . :
rJMSF025J15- AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCANATGAATGACGCTGTGCCTC
rJMFF015L20- AGCCTAGTTCCC
rJMSF028C18- AGCCTAGTTCCCAATATAGTAATTTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
rJMSF009N14- AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCANATGAATGACGCTGTGCCTC
JMSF025J15+ AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
JMSF028C18+ AGCCTAGTTCCCAATATAGTAATTTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
JMSF009N14+ AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
JMFN011J17+ AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
JMFN003F24+ AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
JMSF041P06+ AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
JMFF009P15+ AGCCTAGTTCCCAATNTAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
JMFF015L20+ AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
____________________________________________________________
consensus AGCCTAGTTCCCAATATAGTAA-TTTTCCTCCTTATAGCAGATGAATGACGCTGTGCCTC
. : . : . : . : . : . :
rJMSF025J15- TGTCC
rJMSF028C18- TGTCCC
rJMSF009N14- TGTCCC
JMSF025J15+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
JMSF028C18+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
JMSF009N14+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
JMFN011J17+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
JMFN003F24+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
JMSF041P06+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
JMFF009P15+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
JMFF015L20+ TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
____________________________________________________________
consensus TGTCCCTGTTGTGGGCAACGAACTTCTTTCAGATATCATGTTAGTGATATCATCTGCAAG
. : . : . : . : . : . :
JMSF025J15+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTG-------
JMSF028C18+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTG-------
JMSF009N14+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTGC
JMFN011J17+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTG-------
JMFN003F24+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTG-------
JMSF041P06+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTG-------
JMFF009P15+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTG-------
JMFF015L20+ CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTGCCTTCAG
____________________________________________________________
consensus CTTTACTGCTTCATTATACTCCCTGACCCATGAATCTCCAGAAGCTGCCATTG-------
. : . : . : . : . : . :
JMSF025J15+ -----CCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
JMSF028C18+ -----CCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
JMFN011J17+ -----CCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
JMFN003F24+ -----CCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
JMSF041P06+ -----CCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
JMSF004N15+ GGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
JMFF009P15+ -----CCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
JMFF015L20+ CTAGTCCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAACTAGAAAGATGTGATAA
____________________________________________________________
consensus -----CCTTTTGGATGGGAATAGGGGGCGGAAACGAAACTCAATTAGAAAGATGTGATAA
. : . : . : . : . : . :
JMSF025J15+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
JMSF028C18+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
JMFN011J17+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
JMFN003F24+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
JMSF041P06+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
JMSF004N15+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGAGACAGGAGG
JMFF009P15+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
JMFF015L20+ TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
____________________________________________________________
consensus TCGGGTGGGTATGATTGAGTTTTGACAAGCGGAGGAGAATCGGAAAGAGGCGACAGGAGG
. : . : . : . : . : . :
JMSF025J15+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
JMSF028C18+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGACTTCGGCGTCGTCTTCGTGACGCGC
JMFN011J17+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
JMFN003F24+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
JMSF041P06+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
JMSF004N15+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
JMFF009P15+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
JMFF015L20+ AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
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consensus AGACGCCACCACTTACCGGCAAGTTTTGTCGGGCTTCGGCGTCGTCTTCGTGACGCGCAT
. : . : . : . : . : . :
JMSF025J15+ TCGGATTGAGATTGGGAAAGAGCC
JMFN011J17+ TCGGATTGA
JMFN003F24+ TCGGATTGAGATTGG
JMSF041P06+ TCGGATTGAGATTGGGAAAGAGCC
JMSF004N15+ TCGGATTGAGATTGGGAAAGAGCC
JMFF009P15+ TCGGATTGAGATTGGGAAAGAGCC
JMFF015L20+ TCGGATTGAGATTGGGAAAGAGCCTTTTGAGTTTGGACCGCTAAGGCGTATTATTCATTC
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consensus TCGGATTGAGATTGGGAAAGAGCCTTTTGAGTTTGGACCGCTAAGGCGTATTATTCATTC