clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF009J21 | Sequence | 553 | 003129 (3) | ref|XP_009626938.1| | 229 | PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis] | 759 | 012480 (3) | ref|XP_009600013.1| | 144 | PREDICTED: uncharacterized protein LOC104095566 [Nicotiana tomentosiformis] |
JMFF015K13 | Sequence | 628 | 003129 (3) | ref|XP_009626938.1| | 227 | PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis] | 615 | 012480 (3) | emb|CDP21492.1| | 1e-29 | unnamed protein product [Coffea canephora] |
JMFF050F04 | Sequence | 639 | 003129 (3) | ref|XP_009626938.1| | 226 | PREDICTED: uncharacterized protein LOC104117576 [Nicotiana tomentosiformis] | 598 | 012480 (3) | emb|CDP21492.1| | 3e-27 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF050F04+ CAGAGGTAAATGGCTGCTGCTGCTCTCGACTCACAAAGAA
JMFF015K13+ GCTGCTGCTGCTCTCGACTCACAAAGAA
____________________________________________________________
consensus CAGAGGTAAATGGCTGCTGCTGCTCTCGACTCACAAAGAA
. : . : . : . : . : . :
JMFF050F04+ CATTTGCTGCTGCTGGTCTCTGCCGGAGTTCGGAACAACGGAAAAAGGATTGGGCGGCTG
JMFF009J21+ GATTGGGCGGCTG
JMFF015K13+ CATTTGCTGCTGCTGGTCTCTGCCGGAGTTCGGAACAACGGAAAAAGGATTGGGCGGCTG
____________________________________________________________
consensus CATTTGCTGCTGCTGGTCTCTGCCGGAGTTCGGAACAACGGAAAAAGGATTGGGCGGCTG
. : . : . : . : . : . :
JMFF050F04+ CTGCTGCTGCTGCTGCACAGAGGGCACCGGGTTCGGGTTAAGGTTTATGAAGAACCCTAG
JMFF009J21+ CTGCTGCTGCTGCTGCACAGAGGGCACCGGGTTCGGGTTAAGGTTTATGAAGAACCCTAG
JMFF015K13+ CTGCTGCTGCTGCTGCACAGAGGGCACCGGGTTCGGGTTAAGGTTTATGAAGAACCCTAG
____________________________________________________________
consensus CTGCTGCTGCTGCTGCACAGAGGGCACCGGGTTCGGGTTAAGGTTTATGAAGAACCCTAG
. : . : . : . : . : . :
JMFF050F04+ CTCTTTATCATACACGCTTTTCCTGAACGGGTTCGAGAGCAGAGTCCAAGCGTCGACGAC
JMFF009J21+ CTCTTTATCATACACGCTTTTCCTGAACGGGTTCGAGAGCAGAGTCCAAGCGTCGACGAC
JMFF015K13+ CTCTTTATCATACACGCTTTTCCTGAACGGGTTCGAGAGCAGAGTCCAAGCGTCGACGAC
____________________________________________________________
consensus CTCTTTATCATACACGCTTTTCCTGAACGGGTTCGAGAGCAGAGTCCAAGCGTCGACGAC
. : . : . : . : . : . :
JMFF050F04+ GAGCCGGGAAGCCTGGTCGGCGAACGGAAAGTTGTTCTTCTGAGGGTTTAGTAGGACCGC
JMFF009J21+ GAGCCGGAAAGCCTGGTCGGCGAACGGAAAGTTGTTCTTCTGAGGGTTTAGTAGGACCGC
JMFF015K13+ GAGCCGGGAAGCCTGGTCGGCGAACGGAAAGTTGTTCTTCTGAGGGTTTAGTAGGACCGC
____________________________________________________________
consensus GAGCCGGGAAGCCTGGTCGGCGAACGGAAAGTTGTTCTTCTGAGGGTTTAGTAGGACCGC
. : . : . : . : . : . :
JMFF050F04+ GAGTCGGCGATACTGAGTCGCAATGAACTCCGAGTCGTGCGCCTGGTTGGGAGGGACCTG
JMFF009J21+ GAGTCGGCGATACTGAGTCGCAATGAACTCCGAGTCGTGCGCCTGGTTGGGAGGGACCTG
JMFF015K13+ GAGTCGGCGATACTGAGTCGCAATGAACTCCGAGTCGTGCGCCTGGTTGGGAGGGACCTG
____________________________________________________________
consensus GAGTCGGCGATACTGAGTCGCAATGAACTCCGAGTCGTGCGCCTGGTTGGGAGGGACCTG
. : . : . : . : . : . :
JMFF050F04+ GAGGATGCCATACCAATCGAACTGATTGTTCACCAGCTTGTCCCCGGCGATTAGAGTGTC
JMFF009J21+ GAGGATGCCATACCAATCGAACTGATTGTTCACCAGCTTGTCCCCGGCGATTAGAGTGTC
JMFF015K13+ GAGGATGCCATACCAATCGAACTGATTGTTCACCAGCTTGTCCCCGGCGATTAGAGTGTC
____________________________________________________________
consensus GAGGATGCCATACCAATCGAACTGATTGTTCACCAGCTTGTCCCCGGCGATTAGAGTGTC
. : . : . : . : . : . :
JMFF050F04+ GATGACGGCGAGGATTTGCTCGCCGTGCACCATCGTCGGGTCGGACTCCTGCGCCCGGGT
JMFF009J21+ GATGACGGCGAGGATTTGCTCGCCGTGCACCATCGTCGGGTCGGACTCCTGCGCCCGGGT
JMFF015K13+ GATGACGGCGAGGATTTGCTCGCCGTGCACCATCGTCGGGTCGGACTCCTGCGCCCGGGT
____________________________________________________________
consensus GATGACGGCGAGGATTTGCTCGCCGTGCACCATCGTCGGGTCGGACTCCTGCGCCCGGGT
. : . : . : . : . : . :
JMFF050F04+ CGCAAACGATTTACTCCCCATCAAGTCACGGTTGGCCAGAAGCTTCTCGGCGATGGTCAG
JMFF009J21+ CGCAAACGATTTACTCCCCATCAAGTCACGGTTGGCCAGAAGCTTCTCGGCGATGGTCAG
JMFF015K13+ CGCAAACGATTTACTCCCCATCAAGTCACGGTTGGCCAGAAGCTTCTCGGCGATGGTCAG
____________________________________________________________
consensus CGCAAACGATTTACTCCCCATCAAGTCACGGTTGGCCAGAAGCTTCTCGGCGATGGTCAG
. : . : . : . : . : . :
JMFF050F04+ CCACCGCAACGCCTCCGTCCGGTTAGGGTTTGTGATGAAAAACGGATGCTCCATTTCCCC
JMFF009J21+ CCACCGCAACGCCTCCGTCCGGTTAGGGTTTGTGATGAAAAACGGATGCTCCATTTCCCC
JMFF015K13+ CCACCGCAACGCCTCCGTCCGGTTAGGGTTTGTGATGAAAAACGGATGCTCCATTTCCCC
____________________________________________________________
consensus CCACCGCAACGCCTCCGTCCGGTTAGGGTTTGTGATGAAAAACGGATGCTCCATTTCCCC
. : . : . : . : . : . :
JMFF050F04+ TCTCTCTCTCTCAATCAATCTGCAAAATTTTCTCTGCACAGAGTTTTT
JMFF009J21+ TCTCTCTCTCTCAATCAATCTGCAAAATTTTCTCTGCACAGAGTTTTT
JMFF015K13+ TCTCTCTCTCTCAATCAATCTGCAAAATTTTCTCTGCACAGAGTTTTTTGAGAGAGAAAC
____________________________________________________________
consensus TCTCTCTCTCTCAATCAATCTGCAAAATTTTCTCTGCACAGAGTTTTTTGAGAGAGAAAC