| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015I24 | Sequence | 196 | 003128 (10) | 623 | 003128 (10) | ref|XP_003632230.1| | 4e-97 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||
| JMFF040G06 | Sequence | 635 | 003128 (10) | ref|XP_003632230.1| | 3e-101 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
| JMFF047O12 | Sequence | 485 | 003128 (10) | ref|XP_006294957.1| | 6e-63 | hypothetical protein CARUB_v10024013mg [Capsella rubella] gb|EOA27855.1| hypothe | |||||
| JMFN030E19 | Sequence | 625 | 003128 (10) | ref|XP_003632230.1| | 1e-100 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
| JMSF001L14 | Sequence | 456 | 003128 (10) | ref|XP_006294957.1| | 3e-82 | hypothetical protein CARUB_v10024013mg [Capsella rubella] gb|EOA27855.1| hypothe | 651 | 003128 (10) | ref|XP_006294957.1| | 8e-103 | hypothetical protein CARUB_v10024013mg [Capsella rubella] gb|EOA27855.1| hypothe |
| JMSF013L12 | Sequence | 493 | 003128 (10) | ref|XP_006292807.1| | 1e-91 | hypothetical protein CARUB_v10019058mg [Capsella rubella] gb|EOA25705.1| hypothe | |||||
| JMSF035G21 | Sequence | 661 | 003128 (10) | ref|XP_009782645.1| | 7e-101 | PREDICTED: calmodulin-7-like isoform X2 [Nicotiana sylvestris] | |||||
| JMSF042M05 | Sequence | 736 | 003128 (10) | ref|XP_003632230.1| | 1e-100 | PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF035G21+ TTGTGACACAGAATTACATTCGCTCAAAATAAAAGGAAAATGATAAGTAGC
JMFN030E19+ ACATTCGCTCAAAATAAAAGGAAAATGATAAGTAGC
JMFF040G06+ ACACAGAATTACATTCGCTCAAAATAAAAGGAAAATGATAAGTAGC
____________________________________________________________
consensus TTGTGACACAGAATTACATTCGCTCAAAATAAAAGGAAAATGATAAGTAGC
. : . : . : . : . : . :
JMSF035G21+ AATCCATTATACTAGCTGTGACCCTGTCCATCCAGTTTTGGCAGATGTTTGGGAAATCAC
JMFN030E19+ AATCCATTATACTAGCTGTGACCCTGTCCATCCAGTTTGNGCAGATGTTTGGGAAATCAC
rJMSF001L14- TGGGAAATCAC
rJMFF015I24- TGGGAAATCAC
JMFF040G06+ AATCCATTATACTAGCTGTGACCCTGTCCATCCAGTTTTGGCAGATGTTTGGGAAATCAC
JMSF042M05+ TGGGAAATCAC
____________________________________________________________
consensus AATCCATTATACTAGCTGTGACCCTGTCCATCCAGTTTTGGCAGATGTTTGGGAAATCAC
. : . : . : . : . : . :
JMSF035G21+ TTGGCCATCATAACCTTAACAAACTCCTCGTAGTTAATTTGACCATCGCCATCAACATCC
JMFN030E19+ TTGGCCATCATAACCTTAACAAACTCCTCGTAGTTAATTTGACCATCGCCATCAACATCC
rJMSF001L14- TTGGCCATCATAACCTTAACAAACTCCTCGTAGTTAATTTGACCATCGCCATCAACATCC
rJMFF015I24- TTGGCCATCATAACCTTAACAAACTCCTCGTAGTTAATTTGACCATCGCCATCAACATCC
JMFF040G06+ TTGGCCATCATAACCTTAACAAACTCCTCGTAGTTAATTTGACCATCGCCATCAACATCC
JMSF013L12+ TTTGACCATCGCCATCAACATCC
JMSF042M05+ TTGGCCATCATAACCTTAACAAACTCCTCGTAGTTAATTTGACCATCGCCATCAACATCC
____________________________________________________________
consensus TTGGCCATCATAACCTTAACAAACTCCTCGTAGTTAATTTGACCATCGCCATCAACATCC
. : . : . : . : . : . :
JMSF035G21+ GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
JMFN030E19+ GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
rJMSF001L14- GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
JMSF001L14+ CTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTNGTCATC
rJMFF015I24- GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
JMFF040G06+ GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
JMSF013L12+ GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
JMFF047O12+ TAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTNGTCATC
JMSF042M05+ GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
____________________________________________________________
consensus GCCTCCCTAATCATCTCATCAACTTCTTCATCAGTAAGCTTCTCCCCGAGATTTGTCATC
. : . : . : . : . : . :
JMSF035G21+ ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
JMFN030E19+ ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
rJMSF001L14- ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
JMSF001L14+ ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
rJMFF015I24- ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
JMFF040G06+ ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
JMSF013L12+ ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
JMFF047O12+ ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
JMSF042M05+ ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
____________________________________________________________
consensus ACGTGGCGAAGCTCAGCTGCAGAGATGAATCCATTCTGATCCTTGTCGAAAACCCTGAAT
. : . : . : . : . : . :
JMSF035G21+ GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
JMFN030E19+ GCCTCCTTCAGCTCATCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
rJMSF001L14- GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
JMSF001L14+ GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
rJMFF015I24- GCCTCCTTCAGCTCCTCCTCANAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
JMFF040G06+ GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
JMSF013L12+ GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
JMFF047O12+ GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
JMSF042M05+ GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
____________________________________________________________
consensus GCCTCCTTCAGCTCCTCCTCAGAATCAGTATCCTTCATCTTCCTGGCCATCAGGTTTAGA
. : . : . : . : . : . :
JMSF035G21+ AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
JMFN030E19+ AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
rJMSF001L14- AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
JMSF001L14+ AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
rJMFF015I24- AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
JMFF040G06+ AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
JMSF013L12+ AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
JMFF047O12+ AACTCCGGAAAATGCAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
JMSF042M05+ AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
____________________________________________________________
consensus AACTCCGGAAAAT-CAATTGTTCCGTTACCATCAGCATCAACTTCATTTATCATATCCTG
. : . : . : . : . : . :
JMSF035G21+ GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
JMFN030E19+ GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
rJMSF001L14- GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
JMSF001L14+ GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
rJMFF015I24- GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
JMFF040G06+ GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
JMSF013L12+ GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
JMFF047O12+ GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
JMSF042M05+ GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
____________________________________________________________
consensus GAGCTCAGCTTCAGTAGGATTCTGCCCCAATGACCTCATCACAGTCCCAAGCTCCTTTGT
. : . : . : . : . : . :
JMSF035G21+ TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
JMFN030E19+ TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
rJMSF001L14- TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
JMSF001L14+ TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
rJMFF015I24- TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCANAGAT
JMFF040G06+ TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
JMSF013L12+ TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
JMFF047O12+ TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
JMSF042M05+ TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
____________________________________________________________
consensus TGTGATGCAACCATCGCCGTCCTTATCGAAGAGGCTGAAGGCTTCCTTGAACTCAGAGAT
. : . : . : . : . : . :
JMSF035G21+ CTGATCGTCGGTCAGCTGATCCGCCATT
JMFN030E19+ CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
rJMSF001L14- CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
JMSF001L14+ CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
rJMFF015I24- CTGATCGTCGGTCAGCTGA
JMFF040G06+ CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
JMSF013L12+ CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
JMFF047O12+ CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
JMSF042M05+ CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
JMFF015I24+ CGAACAGAGCGGAGGA
____________________________________________________________
consensus CTGATCGTCGGTCAGCTGATCCGCCATTCTCCTTGCAGAAACTACGAACAGAGCGGAGGA
. : . : . : . : . : . :
JMFN030E19+ GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCGT
rJMSF001L14- GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAG
JMSF001L14+ GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCG
JMFF040G06+ GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCGT
JMSF013L12+ GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCGT
JMFF047O12+ GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCGT
JMSF042M05+ GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCGT
JMFF015I24+ GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCGTGAGGTGCCGG
____________________________________________________________
consensus GGGAAGCGGAGGGAGAGGCGGTTGTGGAATCTGGAGAGTGGATGAATCGTGAGGTGCCGG
. : . : . : . : . : . :
JMFF015I24+ CCGGAGGTTCGTTCAACTTTATATCACCTCTGAGATGTATATACTGACAAGAGTGGGTAT
____________________________________________________________
consensus CCGGAGGTTCGTTCAACTTTATATCACCTCTGAGATGTATATACTGACAAGAGTGGGTAT
. : . : . : . : . : . :
JMFF015I24+ CGTTTTTATTTATTTATTTATTAATTCTTATTATTTACTATATTATTTATATACGGTAAC
____________________________________________________________
consensus CGTTTTTATTTATTTATTTATTAATTCTTATTATTTACTATATTATTTATATACGGTAAC