Contig 003121:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014P12Sequence471003121 (4)gb|KJB71213.1|1e-75hypothetical protein B456_011G110600 [Gossypium raimondii]580003121 (4)ref|XP_005150559.1|8e-77PREDICTED: histone H3.2-like [Melopsittacus undulatus]
JMFN011J01Sequence574003121 (4)ref|XP_005150559.1|9e-75PREDICTED: histone H3.2-like [Melopsittacus undulatus]
JMFN025I07Sequence585003121 (4)ref|XP_005150559.1|4e-77PREDICTED: histone H3.2-like [Melopsittacus undulatus]

Alignment

This contig is upended


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rJMFF014P12-                              ATTACACTAATACATGTTAATATTTGAGGGCAATTGCATT
                      ____________________________________________________________
consensus                                 ATTACACTAATACATGTTAATATTTGAGGGCAATTGCATT
 
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rJMFF014P12-          GCAGAATATAAACCAATTCAAAACCCTAGCAATAGCCACATATACAAACTAGAGGCTAGC
                      ____________________________________________________________
consensus             GCAGAATATAAACCAATTCAAAACCCTAGCAATAGCCACATATACAAACTAGAGGCTAGC
 
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rJMFF014P12-          CTCACCTAAGCCCTCTCGCCCCTAATTCTCCTAGCAAGCTGAATGTCCTTGGGCATGATA
JMFN025I07+                       CTCTCGCCCCTAATTCTCCTAGCAAGCTGAATGTCCTTGGGCATGATA
JMFN011J01+                                            GCAAGCTGAATGTCCTTGGGCATGATA
JMFF014P12+                    GCCCTCTCGCCCCTAATTCTCCTAGCAAGCTGAATGTCCTTGGGCATGATA
                      ____________________________________________________________
consensus             CTCACCTAAGCCCTCTCGCCCCTAATTCTCCTAGCAAGCTGAATGTCCTTGGGCATGATA
 
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rJMFF014P12-          GTCACCCTCTTCGCGTGAATAGCACACAGATTGGTGTCCTCAAACAGCCCGACAAGGTAA
JMFN025I07+           GTCACCCTCTTCGCGTGAATAGCACACAGATTGGTGTCCTCAAACAGCCCGACAAGGTAA
JMFN011J01+           GTCACCCTCTTCGCGTGAATAGCACACAGATTGGTGTCCTCAAACAGCCCGACAAGGTAA
JMFF014P12+           GTCACCCTCTTCGCGTGAATAGCACACAGATTGGTGTCCTCAAACAGCCCGACAAGGTAA
                      ____________________________________________________________
consensus             GTCACCCTCTTCGCGTGAATAGCACACAGATTGGTGTCCTCAAACAGCCCGACAAGGTAA
 
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rJMFF014P12-          GCCTCGGCAGCCTCCTGAAGCGCAGCCACGGCGGAGCTCTGGAAGCGGAGATCGGTCTTG
JMFN025I07+           GCCTCGGCAGCCTCCTGAAGCGCAGCCACGGCGGAGCTCTGGAAGCGGAGATCGGTCTTG
JMFN011J01+           GCCTCGGCAGCCTCCTGAAGCGCAGCCACGGCGGAGCTCTGGAAGCGGAGATCGGTCTTG
JMFF014P12+           GCCTCGGCAGCCTCCTGAAGCGCAGCCACGGCGGAGCTCTGGAAGCGGAGATCGGTCTTG
                      ____________________________________________________________
consensus             GCCTCGGCAGCCTCCTGAAGCGCAGCCACGGCGGAGCTCTGGAAGCGGAGATCGGTCTTG
 
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rJMFF014P12-          AAGTCCTGGGCGATCTCACGAACCAGGCGCTGGAATGGGAGCTTGCGGATGAGTAGCTCA
JMFN025I07+           AAGTCCTGGGCGATCTCACGAACCAGGCGCTGGAATGGGAGCTTGCGGATGAGTAGCTCA
JMFN011J01+           AAGTCCTGGGCGATCTCACGAACCAGGCGCTGGAATGGGAGCTTGCGGATGAGTAGCTCA
JMFF014P12+           AAGTCCTGGGCGATCTCACGAACCAGGCGCTGGAATGGGAGCTTGCGGATGAGTAGCTCA
                      ____________________________________________________________
consensus             AAGTCCTGGGCGATCTCACGAACCAGGCGCTGGAATGGGAGCTTGCGGATGAGTAGCTCA
 
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rJMFF014P12-          GTGGACTTCTGGTACTTTCGGATCTCACGGAGAGCCACCGTCCCAGGCCTGAAGCGGTGA
JMFN025I07+           GTGGACTTCTGGTACTTTCGGATCTCACGGAGAGCCACCGTCCCAGGCCTGAAGCGGTGA
JMFN011J01+           GTGGACTTCTGGTACTTTCGGATCTCACGGAGAGCCACCGTCCCAGGCCTGAAGCGGTGA
JMFF014P12+           GTGGACTTCTGGTACTTTCGGATCTCACGGAGAGCCACCGTCCCAGGCCTGAAGCGGTGA
                      ____________________________________________________________
consensus             GTGGACTTCTGGTACTTTCGGATCTCACGGAGAGCCACCGTCCCAGGCCTGAAGCGGTGA
 
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rJMFF014P12-          GGCTTCTTTACTCCGCCGGTGGCCGGAGCCGACTTCCTGGCCGCCTTGGTAGCTAGTTGC
JMFN025I07+           GGCTTCTTTACTCCGCCGGTGGCCGGAGCCGACTTCCTGGCCGCCTTGGTAGCTAGTTGC
JMFN011J01+           GGCTTCTTTACTCCGCCGGTGGCCGGAGCCGACTTCCTGGCCGCCTTGGTAGCTAGTTGC
JMFF014P12+           GGCTTCTTTACTCCGCCGGTGGCCGGAGCCGACTTCCTGGCCGCCTTGGTAGCTAGTTGC
                      ____________________________________________________________
consensus             GGCTTCTTTACTCCGCCGGTGGCCGGAGCCGACTTCCTGGCCGCCTTGGTAGCTAGTTGC
 
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rJMFF014P12-          TTCCTCGGAGCCTTCCCGCCGGTGGACTTGCGAGCTGTCTGCTTGGTACGAGCCATT   
JMFN025I07+           TTCCTCGGAGCCTTCCCGCCGGTGGACTTGCGAGCTGTCTGCTTGGTACGAGCCATT   
JMFN011J01+           TTCCTCGGAGCCTTCCCGCCGGTGGACTTGCGAGCTGTCTGCTTGGT             
JMFF014P12+           TTCCTCGGAGCCTTCCCGCCGGTGGACTTGCGAGCTGTCTGCTTGGTACGAGCCATTAGG
                      ____________________________________________________________
consensus             TTCCTCGGAGCCTTCCCGCCGGTGGACTTGCGAGCTGTCTGCTTGGTACGAGCCATTAGG
 
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JMFF014P12+           GTTTTGATTGGAGATGGAGACGAGTTTGATTAATTGGGAATTTGGATGCCTTAGCAGTGT
                      ____________________________________________________________
consensus             GTTTTGATTGGAGATGGAGACGAGTTTGATTAATTGGGAATTTGGATGCCTTAGCAGTGT