clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF014A23 | Sequence | 553 | 003119 (8) | ref|XP_002313768.2| | 4e-41 | hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo | 795 | 005402 (9) | ref|XP_006362719.1| | 2e-88 | PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum] |
JMFF019P03 | Sequence | 566 | 003119 (8) | ref|XP_009618616.1| | 6e-46 | PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi | 713 | 005402 (9) | ref|XP_006362719.1| | 3e-51 | PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum] |
JMFF021N11 | Sequence | 549 | 003119 (8) | ref|XP_002313768.2| | 2e-41 | hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo | 750 | 005402 (9) | ref|XP_006362719.1| | 7e-87 | PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum] |
JMFF029M10 | Sequence | 588 | 003119 (8) | ref|XP_002313768.2| | 2e-47 | hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo | 687 | 005402 (9) | ref|XP_006362719.1| | 3e-51 | PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum] |
JMFF040A24 | Sequence | 609 | 003119 (8) | ref|XP_002313768.2| | 1e-51 | hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo | 688 | 005402 (9) | ref|XP_006362719.1| | 3e-51 | PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum] |
JMFF043K19 | Sequence | 620 | 003119 (8) | ref|XP_009618616.1| | 9e-52 | PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi | 618 | 005402 (9) | ref|XP_006362719.1| | 8e-35 | PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum] |
JMFS142G06 | Sequence | 632 | 003119 (8) | ref|XP_010263863.1| | 7e-31 | PREDICTED: probable glycerol kinase isoform X2 [Nelumbo nucifera] | |||||
JMSF052G12 | Sequence | 702 | 003119 (8) | ref|XP_009618616.1| | 7e-65 | PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi | 935 | 005402 (9) | ref|XP_006362719.1| | 8e-107 | PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS142G06+ ATGGTTGAGAAAGCAGCCATCGCGGGTAGCATTCA
____________________________________________________________
consensus ATGGTTGAGAAAGCAGCCATCGCGGGTAGCATTCA
. : . : . : . : . : . :
JMFS142G06+ GCTTCTGGATCATAGCCAAGCTGCACCATTGCATATATATATATGGAATTTATTATGATC
____________________________________________________________
consensus GCTTCTGGATCATAGCCAAGCTGCACCATTGCATATATATATATGGAATTTATTATGATC
. : . : . : . : . : . :
JMFS142G06+ AAACGCTTATAATAAATACTTACCTATAATGATCTAGCTTTACTCCAAGGTGTAAAGGAT
____________________________________________________________
consensus AAACGCTTATAATAAATACTTACCTATAATGATCTAGCTTTACTCCAAGGTGTAAAGGAT
. : . : . : . : . : . :
JMFS142G06+ CAAGCGATTATCACTACGTCAAAAGCTATAATTAGTAGGAAAACGCAATTTTATTTCCCT
____________________________________________________________
consensus CAAGCGATTATCACTACGTCAAAAGCTATAATTAGTAGGAAAACGCAATTTTATTTCCCT
. : . : . : . : . : . :
JMFS142G06+ GTAAACCACCATCACATTTTTTTGAGGAATTTGGCTATTCATTAGCCTCAGCTCAACAAT
____________________________________________________________
consensus GTAAACCACCATCACATTTTTTTGAGGAATTTGGCTATTCATTAGCCTCAGCTCAACAAT
. : . : . : . : . : . :
JMFS142G06+ GACTTGACACTTTACCGGTCTCGACCAACTAATTTGTAAAGTAGAAGTGAAGAAAAACAG
____________________________________________________________
consensus GACTTGACACTTTACCGGTCTCGACCAACTAATTTGTAAAGTAGAAGTGAAGAAAAACAG
. : . : . : . : . : . :
JMFS142G06+ GAATGTTTGTTTCACATAGTCAATGAGTTGAATACCTTCAATGCATTATTGTAGTCCGTA
____________________________________________________________
consensus GAATGTTTGTTTCACATAGTCAATGAGTTGAATACCTTCAATGCATTATTGTAGTCCGTA
. : . : . : . : . : . :
JMFS142G06+ ATTCCCAGCTTGCCATGTAGGAAATATGACACCCAGTCAGCATGATGCAACACCAGTGCA
JMSF052G12+ GTAGGAAATATGACACCCAGTCAGCATGATGCAACACCAGTGCA
____________________________________________________________
consensus ATTCCCAGCTTGCCATGTAGGAAATATGACACCCAGTCAGCATGATGCAACACCAGTGCA
. : . : . : . : . : . :
JMFS142G06+ GACTTCTTGCTAAACTCGTAAGAGTTCCACCATGAAAGGAGCTTGCAAAGAGCAGAAGAA
JMFF043K19+ AGGAGCTTGCAAAGAGCAGAAGAA
JMFF040A24+ AGGAGCTTGCAAAGAGCAGAAGAA
JMSF052G12+ GACTTCTTGCTAAACTCGTAAGAGTTCCACCATGAAAGGAGCTTGCAAAGAGCAGAAGAA
____________________________________________________________
consensus GACTTCTTGCTAAACTCGTAAGAGTTCCACCATGAAAGGAGCTTGCAAAGAGCAGAAGAA
. : . : . : . : . : . :
JMFS142G06+ TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF043K19+ TCGGCGAGGACACAGTGGTNTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF040A24+ TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF029M10+ ACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF019P03+ TTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF021N11+ CAAAACATCGGCA
JMSF052G12+ TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF014A23+ CAAAACATCGGCA
____________________________________________________________
consensus TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
. : . : . : . : . : . :
JMFS142G06+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTG
JMFF043K19+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF040A24+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF029M10+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF019P03+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF021N11+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMSF052G12+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF014A23+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
____________________________________________________________
consensus TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
. : . : . : . : . : . :
JMFF043K19+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF040A24+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF029M10+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF019P03+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF021N11+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMSF052G12+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF014A23+ AAGATGGTTCCAGAAGTCCCATCAACAGAAACTGAAGCAACATACGGGCGAAGACCCACA
____________________________________________________________
consensus AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
. : . : . : . : . : . :
JMFF043K19+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF040A24+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF029M10+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF019P03+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF021N11+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMSF052G12+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF014A23+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
____________________________________________________________
consensus GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
. : . : . : . : . : . :
JMFF043K19+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF040A24+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF029M10+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF019P03+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF021N11+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMSF052G12+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF014A23+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
____________________________________________________________
consensus TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
. : . : . : . : . : . :
JMFF043K19+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF040A24+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF029M10+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF019P03+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF021N11+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMSF052G12+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF014A23+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
____________________________________________________________
consensus TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
. : . : . : . : . : . :
JMFF043K19+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF040A24+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF029M10+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF019P03+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF021N11+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMSF052G12+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF014A23+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
____________________________________________________________
consensus CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
. : . : . : . : . : . :
JMFF043K19+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF040A24+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF029M10+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF019P03+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF021N11+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMSF052G12+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF014A23+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
____________________________________________________________
consensus GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
. : . : . : . : . : . :
JMFF043K19+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF040A24+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF029M10+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF019P03+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF021N11+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMSF052G12+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF014A23+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
____________________________________________________________
consensus GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
. : . : . : . : . : . :
JMFF043K19+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATT
JMFF040A24+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACT
JMFF029M10+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACT
JMFF019P03+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACT
JMFF021N11+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACT
JMSF052G12+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACT
JMFF014A23+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACTGAGT
____________________________________________________________
consensus CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACTGAGT