Contig 003119:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014A23Sequence553003119 (8)ref|XP_002313768.2|4e-41hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo795005402 (9)ref|XP_006362719.1|2e-88PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF019P03Sequence566003119 (8)ref|XP_009618616.1|6e-46PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi713005402 (9)ref|XP_006362719.1|3e-51PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF021N11Sequence549003119 (8)ref|XP_002313768.2|2e-41hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo750005402 (9)ref|XP_006362719.1|7e-87PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF029M10Sequence588003119 (8)ref|XP_002313768.2|2e-47hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo687005402 (9)ref|XP_006362719.1|3e-51PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF040A24Sequence609003119 (8)ref|XP_002313768.2|1e-51hypothetical protein POPTR_0009s12520g [Populus trichocarpa] gb|EEE87723.2| hypo688005402 (9)ref|XP_006362719.1|3e-51PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFF043K19Sequence620003119 (8)ref|XP_009618616.1|9e-52PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi618005402 (9)ref|XP_006362719.1|8e-35PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]
JMFS142G06Sequence632003119 (8)ref|XP_010263863.1|7e-31PREDICTED: probable glycerol kinase isoform X2 [Nelumbo nucifera]
JMSF052G12Sequence702003119 (8)ref|XP_009618616.1|7e-65PREDICTED: uncharacterized protein LOC104110774 isoform X1 [Nicotiana tomentosi935005402 (9)ref|XP_006362719.1|8e-107PREDICTED: uncharacterized protein LOC102595504 isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS142G06+ ATGGTTGAGAAAGCAGCCATCGCGGGTAGCATTCA
                      ____________________________________________________________
consensus ATGGTTGAGAAAGCAGCCATCGCGGGTAGCATTCA
 
. : . : . : . : . : . :
JMFS142G06+ GCTTCTGGATCATAGCCAAGCTGCACCATTGCATATATATATATGGAATTTATTATGATC
                      ____________________________________________________________
consensus GCTTCTGGATCATAGCCAAGCTGCACCATTGCATATATATATATGGAATTTATTATGATC
 
. : . : . : . : . : . :
JMFS142G06+ AAACGCTTATAATAAATACTTACCTATAATGATCTAGCTTTACTCCAAGGTGTAAAGGAT
                      ____________________________________________________________
consensus AAACGCTTATAATAAATACTTACCTATAATGATCTAGCTTTACTCCAAGGTGTAAAGGAT
 
. : . : . : . : . : . :
JMFS142G06+ CAAGCGATTATCACTACGTCAAAAGCTATAATTAGTAGGAAAACGCAATTTTATTTCCCT
                      ____________________________________________________________
consensus CAAGCGATTATCACTACGTCAAAAGCTATAATTAGTAGGAAAACGCAATTTTATTTCCCT
 
. : . : . : . : . : . :
JMFS142G06+ GTAAACCACCATCACATTTTTTTGAGGAATTTGGCTATTCATTAGCCTCAGCTCAACAAT
                      ____________________________________________________________
consensus GTAAACCACCATCACATTTTTTTGAGGAATTTGGCTATTCATTAGCCTCAGCTCAACAAT
 
. : . : . : . : . : . :
JMFS142G06+ GACTTGACACTTTACCGGTCTCGACCAACTAATTTGTAAAGTAGAAGTGAAGAAAAACAG
                      ____________________________________________________________
consensus GACTTGACACTTTACCGGTCTCGACCAACTAATTTGTAAAGTAGAAGTGAAGAAAAACAG
 
. : . : . : . : . : . :
JMFS142G06+ GAATGTTTGTTTCACATAGTCAATGAGTTGAATACCTTCAATGCATTATTGTAGTCCGTA
                      ____________________________________________________________
consensus GAATGTTTGTTTCACATAGTCAATGAGTTGAATACCTTCAATGCATTATTGTAGTCCGTA
 
. : . : . : . : . : . :
JMFS142G06+ ATTCCCAGCTTGCCATGTAGGAAATATGACACCCAGTCAGCATGATGCAACACCAGTGCA
JMSF052G12+ GTAGGAAATATGACACCCAGTCAGCATGATGCAACACCAGTGCA
                      ____________________________________________________________
consensus ATTCCCAGCTTGCCATGTAGGAAATATGACACCCAGTCAGCATGATGCAACACCAGTGCA
 
. : . : . : . : . : . :
JMFS142G06+ GACTTCTTGCTAAACTCGTAAGAGTTCCACCATGAAAGGAGCTTGCAAAGAGCAGAAGAA
JMFF043K19+ AGGAGCTTGCAAAGAGCAGAAGAA
JMFF040A24+ AGGAGCTTGCAAAGAGCAGAAGAA
JMSF052G12+ GACTTCTTGCTAAACTCGTAAGAGTTCCACCATGAAAGGAGCTTGCAAAGAGCAGAAGAA
                      ____________________________________________________________
consensus GACTTCTTGCTAAACTCGTAAGAGTTCCACCATGAAAGGAGCTTGCAAAGAGCAGAAGAA
 
. : . : . : . : . : . :
JMFS142G06+ TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF043K19+ TCGGCGAGGACACAGTGGTNTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF040A24+ TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF029M10+ ACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF019P03+ TTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF021N11+ CAAAACATCGGCA
JMSF052G12+ TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
JMFF014A23+ CAAAACATCGGCA
                      ____________________________________________________________
consensus TCGGCGAGGACACAGTGGTTTTCAGGAGCAATAGACTTCACCTCCGGCAAAACATCGGCA
 
. : . : . : . : . : . :
JMFS142G06+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTG
JMFF043K19+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF040A24+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF029M10+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF019P03+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF021N11+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMSF052G12+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
JMFF014A23+ TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
                      ____________________________________________________________
consensus TAACTCTCATTATAGAGGTATGCTTTAGATAATGGCTCCCCAGTAGTGCTGTCTAAGATG
 
. : . : . : . : . : . :
JMFF043K19+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF040A24+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF029M10+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF019P03+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF021N11+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMSF052G12+ AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
JMFF014A23+ AAGATGGTTCCAGAAGTCCCATCAACAGAAACTGAAGCAACATACGGGCGAAGACCCACA
                      ____________________________________________________________
consensus AAGATGGTTCCAGAAGTCCCATCAACAGAAATTGAAGCAACATACGGGCGAAGACCCACA
 
. : . : . : . : . : . :
JMFF043K19+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF040A24+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF029M10+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF019P03+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF021N11+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMSF052G12+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
JMFF014A23+ GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
                      ____________________________________________________________
consensus GGCACATCCCCTAGAAGTAAGAAGAGAGCTTCTTTCCAACCTCGTAGCCAATCCACTGCT
 
. : . : . : . : . : . :
JMFF043K19+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF040A24+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF029M10+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF019P03+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF021N11+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMSF052G12+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
JMFF014A23+ TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
                      ____________________________________________________________
consensus TTATCTTCCTCTCTCAAATACAAAGGGTAATCCCTCTTCCCTTCGGAAAGAAGATTCCCG
 
. : . : . : . : . : . :
JMFF043K19+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF040A24+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF029M10+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF019P03+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF021N11+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMSF052G12+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
JMFF014A23+ TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
                      ____________________________________________________________
consensus TCGTCGTCAATCAGGGCGTAACGAGCGCCGGAAGTGCCAAAATCCATGCCCAGATAGAGC
 
. : . : . : . : . : . :
JMFF043K19+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF040A24+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF029M10+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF019P03+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF021N11+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMSF052G12+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
JMFF014A23+ CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
                      ____________________________________________________________
consensus CGGCCGCCGGCCAGGGGATCAGAAACCACGGAGCCAACTTCGTTATTCTTGGAAATGACG
 
. : . : . : . : . : . :
JMFF043K19+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF040A24+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF029M10+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF019P03+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF021N11+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMSF052G12+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
JMFF014A23+ GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
                      ____________________________________________________________
consensus GCAATGGGTTTTGGTTTGCCGAAAATGTGAGGGCTTGAGATTGGTTTTGCAGACGGCGGC
 
. : . : . : . : . : . :
JMFF043K19+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF040A24+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF029M10+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF019P03+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF021N11+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMSF052G12+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
JMFF014A23+ GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
                      ____________________________________________________________
consensus GTCCATTTTCGGAAGGAATGCTGGAGCGGCAGCGAAGAGCAGATGGCGTTGTATACGGAG
 
. : . : . : . : . : . :
JMFF043K19+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATT
JMFF040A24+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACT
JMFF029M10+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACT
JMFF019P03+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACT
JMFF021N11+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACT
JMSF052G12+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACT
JMFF014A23+ CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACTGAGT
                      ____________________________________________________________
consensus CTCGCCATTGTTTGGATGCTTATGCTGAAATTGTCTTTACACTTCGTATTTGAACTGAGT