Contig 003118:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014A05Sequence531003118 (3)760011320 (2)ref|XP_009784524.1|2e-87PREDICTED: IAA-alanine resistance protein 1 [Nicotiana sylvestris]
JMFS035E02Sequence641003118 (3)ref|XP_002311552.2|4e-06IAA-ALANINE RESISTANCE protein 1 [Populus trichocarpa] gb|EEE88919.2| IAA-ALANIN
JMFS040G09Sequence354003118 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS035E02+ GGTCATGATCATGAGAATGGACCGCA
                      ____________________________________________________________
consensus GGTCATGATCATGAGAATGGACCGCA
 
. : . : . : . : . : . :
JMFS035E02+ TGGCTTTCTGAATGAGAGTGATTGTCACCAAAAGCATGGGGTAGTTGATGAAGAAAAGCA
                      ____________________________________________________________
consensus TGGCTTTCTGAATGAGAGTGATTGTCACCAAAAGCATGGGGTAGTTGATGAAGAAAAGCA
 
. : . : . : . : . : . :
JMFS035E02+ TCACCCAACATTGCTCCAGCCCCAAATAATGCCAGAGCATCCACAATGGCTTTGGATGGC
                      ____________________________________________________________
consensus TCACCCAACATTGCTCCAGCCCCAAATAATGCCAGAGCATCCACAATGGCTTTGGATGGC
 
. : . : . : . : . : . :
JMFS035E02+ CTTCCTTTCAAAAATATTAGAGGCAATATGATCAGGCAAACAAGGGATGCCAAGCTCACC
                      ____________________________________________________________
consensus CTTCCTTTCAAAAATATTAGAGGCAATATGATCAGGCAAACAAGGGATGCCAAGCTCACC
 
. : . : . : . : . : . :
JMFS035E02+ AATAGAGAGCAACTCATTGCATGAAGCCAAAGCCCAAGACCAGAGAACTCAGAATCAACA
                      ____________________________________________________________
consensus AATAGAGAGCAACTCATTGCATGAAGCCAAAGCCCAAGACCAGAGAACTCAGAATCAACA
 
. : . : . : . : . : . :
JMFS035E02+ TGCCCGTGGTCATGATGGTGGTGGTGGTGTTCATCGCGGGTCCCAAATCCGTACAGCTTT
                      ____________________________________________________________
consensus TGCCCGTGGTCATGATGGTGGTGGTGGTGTTCATCGCGGGTCCCAAATCCGTACAGCTTT
 
. : . : . : . : . : . :
JMFS035E02+ AGATCTTCCTCTTCCGCCAATTCCTCAGGAAGCAGCTTCCTTTTATTCACTTCAGCGCCG
JMFS040G09+ CAGCGCCG
JMFF014A05+ TCTTCCGCCAATTCCTCAGGAAGCAGCTTCCTTTTATTCACTTCAGCGCCG
                      ____________________________________________________________
consensus AGATCTTCCTCTTCCGCCAATTCCTCAGGAAGCAGCTTCCTTTTATTCACTTCAGCGCCG
 
. : . : . : . : . : . :
JMFS035E02+ CTATGGTGGTGGTGGTGATCGTGATCGTGGCCGTGGCTACACTGGTGAGTAGACGCGTGT
JMFS040G09+ CTATGGTGGTGGTGGTGATCGTGATCGTGGCCGTGGCTACACTGGTGAGTAGACGCGTGT
JMFF014A05+ CTATGGTGGTGGTGGTGATCGTGATCGTGGCCGTGGCTACACTGGTGAGTAGACGCGTGT
                      ____________________________________________________________
consensus CTATGGTGGTGGTGGTGATCGTGATCGTGGCCGTGGCTACACTGGTGAGTAGACGCGTGT
 
. : . : . : . : . : . :
JMFS035E02+ CCATGGTCAGCATCGCCGTGGTGATGGTCGTGTCCGTGGCTACACTGTTCCGGCGAAGAA
JMFS040G09+ CCATGGTCAGCATCGCCGTGGTGATGGTCGTGTCCGTGGCTACACTGTTCCGGCGAAGAA
JMFF014A05+ CCATGGTCAGCATCGCCGTGGTGATGGTCGTGTCCGTGGCTACACTGTTCCGGCGAAGAA
                      ____________________________________________________________
consensus CCATGGTCAGCATCGCCGTGGTGATGGTCGTGTCCGTGGCTACACTGTTCCGGCGAAGAA
 
. : . : . : . : . : . :
JMFS035E02+ TGCCCGTGGACCGCCGACACACACAATCCAGAAATCAGCAGTAAGACAAACAGTAAACCG
JMFS040G09+ TGCCCGTGGACCGCCGACACACACAATCCAGAAATCAGCAGTAAGACAAACAGTAAACCG
JMFF014A05+ TGCCCGTGGACCGCCGACACACACAATCCAGAAATCAGCAGTAAGACAAACAGTAAACCG
                      ____________________________________________________________
consensus TGCCCGTGGACCGCCGACACACACAATCCAGAAATCAGCAGTAAGACAAACAGTAAACCG
 
. : . : . : . : . : . :
JMFS035E02+ GGGCAGATCTGTCTTAGAGCAACCGCCATTTCTGCTTCTCCTTCTAAGATGAGTACGGCG
JMFS040G09+ GGGCAGATCTGTCTTAGAGCAACCGCCATTTCTGCTTCTCCTTCTAAGATGAGTACGGCG
JMFF014A05+ GGGCAGATCTGTCTTAGAGCAACCGCCATTTCTGCTTCTCCTTCTAAGATGAGTACGGCG
                      ____________________________________________________________
consensus GGGCAGATCTGTCTTAGAGCAACCGCCATTTCTGCTTCTCCTTCTAAGATGAGTACGGCG
 
. : . : . : . : . : . :
JMFS035E02+ GAGTAGACGACTTCG
JMFS040G09+ GAGTAGACGACTTCGCCACTTGGGAAAATTAAATTTGAACCCCTTAAAAAAAAATCTAAT
JMFF014A05+ GAGTAGACGACTTCGCCACTTGGGAAAATTAAATTTGAACCCCTCAAAAAAAAATCTAAT
                      ____________________________________________________________
consensus GAGTAGACGACTTCGCCACTTGGGAAAATTAAATTTGAACCCCTTAAAAAAAAATCTAAT
 
. : . : . : . : . : . :
JMFS040G09+ TTTAGGAAGCGAATTTAGAGTGGGGAGAGCTAATG
JMFF014A05+ TTTAGGAAGCGAATTTAGAGTGGGGAGAGCTAATGTGGAAGTGGATGAAGAACATTAAAT
                      ____________________________________________________________
consensus TTTAGGAAGCGAATTTAGAGTGGGGAGAGCTAATGTGGAAGTGGATGAAGAACATTAAAT
 
. : . : . : . : . : . :
JMFF014A05+ TGGGATTTGAAACAATCAGAGGAATTAAGAGCGGTTTTTGCAGGTGCCTTCAATTGTGAT
                      ____________________________________________________________
consensus TGGGATTTGAAACAATCAGAGGAATTAAGAGCGGTTTTTGCAGGTGCCTTCAATTGTGAT
 
. : . : . : . : . : . :
JMFF014A05+ TATACAAACGGCGCAGAAGAAGAGTATAATTATTCCCACGATTACACCGAATGTTACCAC
                      ____________________________________________________________
consensus TATACAAACGGCGCAGAAGAAGAGTATAATTATTCCCACGATTACACCGAATGTTACCAC