Contig 003116:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013L16Sequence521003116 (2)ref|XP_010065984.1|2e-105PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Eucalyptus grandis724003448 (15)ref|XP_009760941.1|2e-96PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Nicotiana sylvestr
JMFS115H08Sequence627003116 (2)gb|EYU42921.1|5e-92hypothetical protein MIMGU_mgv1a000687mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFS115H08+                                     AGAATGCCTGTGACTGAAGGTACCTCTTTCAACA
                      ____________________________________________________________
consensus                                       AGAATGCCTGTGACTGAAGGTACCTCTTTCAACA
 
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JMFS115H08+           TCCTGGCCACTCAACCTTACATGATTTCCTTCCACAAGAAGTGTTGCAAAAGCAAGTGCT
                      ____________________________________________________________
consensus             TCCTGGCCACTCAACCTTACATGATTTCCTTCCACAAGAAGTGTTGCAAAAGCAAGTGCT
 
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JMFS115H08+           TCTCCTAGTGCCCAGTCAACACCTTCCCCTGTTTCAATCATCTTATTGCGGTCATCAAAA
                      ____________________________________________________________
consensus             TCTCCTAGTGCCCAGTCAACACCTTCCCCTGTTTCAATCATCTTATTGCGGTCATCAAAA
 
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JMFS115H08+           ATCCTTTTCACAGCTCTATGAGGCTTAAAATTTTCTGGAAGGGTAGTGATTGCTTTTCCA
JMFF013L16+                              GAGGCTTAAAATTTTCTGGAAGGGTAGTGATTGCTTTTCCA
                      ____________________________________________________________
consensus             ATCCTTTTCACAGCTCTATGAGGCTTAAAATTTTCTGGAAGGGTAGTGATTGCTTTTCCA
 
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JMFS115H08+           ACATTTTTCAGGATCTCCGGTTTCACACCTGTATTTCGGATACGTGAAAGCTGTTCAGGA
JMFF013L16+           ACATTTTTCAGGATCTCCGGTTTCACACCTGTATTTCGGATACGTGAAAGCTGTTCAGGA
                      ____________________________________________________________
consensus             ACATTTTTCAGGATCTCCGGTTTCACACCTGTATTTCGGATACGTGAAAGCTGTTCAGGA
 
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JMFS115H08+           GACTTAAAACCAGACCAAAAGGCTGAAAGCCAATCTCTCTTTTGAGTAACATAGTCTTTG
JMFF013L16+           GACTTAAAACCAGACCAAAAGGCTGAAAGCCAATCTCTCTTTTGAGTAACATAGTCTTTG
                      ____________________________________________________________
consensus             GACTTAAAACCAGACCAAAAGGCTGAAAGCCAATCTCTCTTTTGAGTAACATAGTCTTTG
 
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JMFS115H08+           CTAGCAACAAATTCCTCATTGAGGATTGAATTTATCTTTTTCTGTATCTTTTCAATACCC
JMFF013L16+           CTAGCAACAAATTCCTCATTGAGGATTGAATTTATCTTTTTCTGTATCTTTTCAATACCC
                      ____________________________________________________________
consensus             CTAGCAACAAATTCCTCATTGAGGATTGAATTTATCTTTTTCTGTATCTTTTCAATACCC
 
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JMFS115H08+           TCCTTTGTCACATTACCAGACTCTAGAAGTTTCTTTTGATAGATCTCCAATGCTGAAGGA
JMFF013L16+           TCCTTTGTCACATTACCAGACTCTAGAAGTTTCTTTTGATAGATCTCCAATGCTGAAGGA
                      ____________________________________________________________
consensus             TCCTTTGTCACATTACCAGACTCTAGAAGTTTCTTTTGATAGATCTCCAATGCTGAAGGA
 
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JMFS115H08+           TGATTTCGGATGACCTTGTACATTTTTGGTTGGGTAAAAGATG                 
JMFF013L16+           TGATTTCGGATGACCTTGTACATTTTTGGTTGGGTAAAAGATGGTTCGTCTATTTCATTA
                      ____________________________________________________________
consensus             TGATTTCGGATGACCTTGTACATTTTTGGTTGGGTAAAAGATGGTTCGTCTATTTCATTA
 
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JMFF013L16+           TGCCCATATCGCCGATAACAGACAATATCAACAACAACATCTGAGTGGAATGTTTGACGC
                      ____________________________________________________________
consensus             TGCCCATATCGCCGATAACAGACAATATCAACAACAACATCTGAGTGGAATGTTTGACGC
 
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JMFF013L16+           CACTCTGCAGCAAGTTCACAAGCATGAACTACAGCCTCAACATCATCACCATTGACGTGA
                      ____________________________________________________________
consensus             CACTCTGCAGCAAGTTCACAAGCATGAACTACAGCCTCAACATCATCACCATTGACGTGA
 
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JMFF013L16+           AAAATTGGGGCATTCAAGGCTTTGGCAACATCAGTACAGTATTGAGAAGATCTTCCCGAC
                      ____________________________________________________________
consensus             AAAATTGGGGCATTCAAGGCTTTGGCAACATCAGTACAGTATTGAGAAGATCTTCCCGAC