| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005C18 | Sequence | 517 | 003111 (10) | ref|XP_009757292.1| | 1e-35 | PREDICTED: proton pump-interactor 1-like isoform X1 [Nicotiana sylvestris] ref| | 803 | 001120 (14) | ref|XP_004296510.1| | 2e-04 | PREDICTED: proton pump-interactor 1 [Fragaria vesca subsp. vesca] ref|XP_0114623 |
| JMFF012B01 | Sequence | 441 | 003111 (10) | ref|XP_009757292.1| | 3e-32 | PREDICTED: proton pump-interactor 1-like isoform X1 [Nicotiana sylvestris] ref| | 833 | 001120 (14) | ref|XP_004296510.1| | 2e-05 | PREDICTED: proton pump-interactor 1 [Fragaria vesca subsp. vesca] ref|XP_0114623 |
| JMFF012O13 | Sequence | 261 | 003111 (10) | 823 | 001120 (14) | ref|XP_004296510.1| | 6e-05 | PREDICTED: proton pump-interactor 1 [Fragaria vesca subsp. vesca] ref|XP_0114623 | |||
| JMFF018G12 | Sequence | 575 | 003111 (10) | ref|XP_009757292.1| | 1e-41 | PREDICTED: proton pump-interactor 1-like isoform X1 [Nicotiana sylvestris] ref| | 835 | 001120 (14) | ref|XP_004296510.1| | 6e-07 | PREDICTED: proton pump-interactor 1 [Fragaria vesca subsp. vesca] ref|XP_0114623 |
| JMFF019G03 | Sequence | 582 | 003111 (10) | ref|XP_009757292.1| | 3e-43 | PREDICTED: proton pump-interactor 1-like isoform X1 [Nicotiana sylvestris] ref| | 684 | 001120 (14) | ref|XP_010091118.1| | 1e-04 | hypothetical protein L484_011324 [Morus notabilis] gb|EXB42553.1| hypothetical p |
| JMFF025P12 | Sequence | 546 | 003111 (10) | ref|XP_009757292.1| | 1e-39 | PREDICTED: proton pump-interactor 1-like isoform X1 [Nicotiana sylvestris] ref| | 780 | 001120 (14) | ref|XP_010091118.1| | 2e-04 | hypothetical protein L484_011324 [Morus notabilis] gb|EXB42553.1| hypothetical p |
| JMFS073E12 | Sequence | 612 | 003111 (10) | ref|XP_011082687.1| | 2e-79 | PREDICTED: proton pump-interactor 1-like [Sesamum indicum] ref|XP_011082688.1| P | |||||
| JMSF035A08 | Sequence | 696 | 003111 (10) | ref|XP_009591964.1| | 5e-59 | PREDICTED: proton pump-interactor 1-like [Nicotiana tomentosiformis] | 711 | 001120 (14) | ref|XP_010091118.1| | 9e-05 | hypothetical protein L484_011324 [Morus notabilis] gb|EXB42553.1| hypothetical p |
| JMSF043A10 | Sequence | 743 | 003111 (10) | ref|XP_009757292.1| | 1e-68 | PREDICTED: proton pump-interactor 1-like isoform X1 [Nicotiana sylvestris] ref| | 634 | 001120 (14) | ref|XP_010091118.1| | 6e-05 | hypothetical protein L484_011324 [Morus notabilis] gb|EXB42553.1| hypothetical p |
| JMSF045D09 | Sequence | 818 | 003111 (10) | ref|XP_009591964.1| | 2e-85 | PREDICTED: proton pump-interactor 1-like [Nicotiana tomentosiformis] | 765 | 001120 (14) | ref|XP_004296510.1| | 4e-05 | PREDICTED: proton pump-interactor 1 [Fragaria vesca subsp. vesca] ref|XP_0114623 |
This contig is upended
. : . : . : . : . : . :
JMFS073E12+ TCCTTCGACGCTNTC
____________________________________________________________
consensus TCCTTCGACGCTNTC
. : . : . : . : . : . :
JMFS073E12+ TGAGTTGGTTTCGCCACCACTTCGGGTGCAGGCACGTTGGGAGTCTCGGGCAATACCAGC
____________________________________________________________
consensus TGAGTTGGTTTCGCCACCACTTCGGGTGCAGGCACGTTGGGAGTCTCGGGCAATACCAGC
. : . : . : . : . : . :
JMFS073E12+ GGCTTCTCATCAGGGTTTCTCATCCTACCGTCCTTACTCAACTGCCTCATATCAAGCGAT
____________________________________________________________
consensus GGCTTCTCATCAGGGTTTCTCATCCTACCGTCCTTACTCAACTGCCTCATATCAAGCGAT
. : . : . : . : . : . :
JMFS073E12+ TGTAAAATTCTCTTCTCATAGTCATCCCTGAATGACTTGTTGCTGCTCCATTGGGCCACA
____________________________________________________________
consensus TGTAAAATTCTCTTCTCATAGTCATCCCTGAATGACTTGTTGCTGCTCCATTGGGCCACA
. : . : . : . : . : . :
JMFS073E12+ AATTTATCGACCTCGGTTGCAGAAAGTTCTCTTAGGGCAGCAACATCCTTCTTATCAGCA
____________________________________________________________
consensus AATTTATCGACCTCGGTTGCAGAAAGTTCTCTTAGGGCAGCAACATCCTTCTTATCAGCA
. : . : . : . : . : . :
JMFS073E12+ AGTTGTCTGGCTTCAAGGTTGAGTTTACGAGACTGGAAGAAAGAAGAATTCCCTTCTTCA
____________________________________________________________
consensus AGTTGTCTGGCTTCAAGGTTGAGTTTACGAGACTGGAAGAAAGAAGAATTCCCTTCTTCA
. : . : . : . : . : . :
JMFS073E12+ CGTTGTTTTCTGAATTCCTGAATGCTTTGAAAAGTTTTGTCCCGTTGCTGAGTTAGAGCA
____________________________________________________________
consensus CGTTGTTTTCTGAATTCCTGAATGCTTTGAAAAGTTTTGTCCCGTTGCTGAGTTAGAGCA
. : . : . : . : . : . :
JMFS073E12+ GTCAATTCCTCCTCCAATGTGCCGATCTCTTTCTTCATAGCATCAAGCTCATCATCAATT
____________________________________________________________
consensus GTCAATTCCTCCTCCAATGTGCCGATCTCTTTCTTCATAGCATCAAGCTCATCATCAATT
. : . : . : . : . : . :
JMFS073E12+ TCCTTAAGTTTGGCACTAAGAGCTTGTTGCTCCTTTCGGACACCATCCAGGTCGACGCCT
____________________________________________________________
consensus TCCTTAAGTTTGGCACTAAGAGCTTGTTGCTCCTTTCGGACACCATCCAGGTCGACGCCT
. : . : . : . : . : . :
JMFS073E12+ ATAAGCTTGACCTGGCTTTGAATGGACTCTTTTTCGCCCAATGATTCCTGAATCTTTGCC
JMSF045D09+ CAATGATTCCTGAATCTTTGCC
____________________________________________________________
consensus ATAAGCTTGACCTGGCTTTGAATGGACTCTTTTTCGCCCAATGATTCCTGAATCTTTGCC
. : . : . : . : . : . :
JMFS073E12+ CGCTCAGCAGCATGAGCAATAACTTTATCCCTCGTTCCTTCAAATTGTTTAATTTCT
JMSF045D09+ CGCTCAGCAGCATGAGCAATAACTTTATCCCTCGTTCCTTCAAATTGTTTAATTTCTCTA
____________________________________________________________
consensus CGCTCAGCAGCATGAGCAATAACTTTATCCCTCGTTCCTTCAAATTGTTTAATTTCTCTA
. : . : . : . : . : . :
JMSF045D09+ AGAATTTGCTTCTCTTCATTCAGAGTAATGCTTTCATGTTGAATACGATATTGCAGACTT
JMSF043A10+ TTCAGAGTAATGCTTTCATGTTGAATACGATATTGCAGACTT
____________________________________________________________
consensus AGAATTTGCTTCTCTTCATTCAGAGTAATGCTTTCATGTTGAATACGATATTGCAGACTT
. : . : . : . : . : . :
JMSF045D09+ TTAATGTAATCATTGAGCTCTGCTTCAGAAGAAAAAATAACAGAACGTTGGTCTCGACCA
JMSF035A08+ TGTAATCATTGAGCTCTGCTTCAGANGAAAAAATAACAGAACGTTGGTCTCGACCA
JMSF043A10+ TTAATGTAATCATTGAGCTCTGCTTCAGAAGAAAAAATAACAGAACGTTGGTCTCG---A
____________________________________________________________
consensus TTAATGTAATCATTGAGCTCTGCTTCAGAAGAAAAAATAACAGAACGTTGGTCTCGACCA
. : . : . : . : . : . :
JMSF045D09+ CCAGCGTTATTGCCGCGCAACTTGCCTAAAGCTTGCTGCAAAGGTTCCATCACTTTCCTT
JMSF035A08+ CCAGCGTTATTGCCGCGCAACTTGCCTAAAGCTTGCTGCAAAGGTTCCATCACTTTCCTT
JMSF043A10+ CCAGCGTTATTGCCGCGCAACTTGCCTAAAGCTTGCTGCAAAGGTTCCATCACTTTCCTT
____________________________________________________________
consensus CCAGCGTTATTGCCGCGCAACTTGCCTAAAGCTTGCTGCAAAGGTTCCATCACTTTCCTT
. : . : . : . : . : . :
JMSF045D09+ TTCTCATCCATCTGTGACCTGAACTGCTGTCTTTCAGCACTTAGAGACTTCCTTTCGTTA
JMFF025P12+ GCACTTAGAGACTTCCTTTCGTTA
JMFF019G03+ TTCTCATCCATCTGTGACCTGAACTGCTGTCTTTCAGCACTTAGAGACTTCCTTTCGTTA
JMSF035A08+ TTCTCATCCATCTGTGACCTGAACTGCTGTCTTTCAGCACTTAGAGACTTCCTTTCGTTA
JMSF043A10+ TTCTCATCCATCTGTGACCTGAACTGCTGTCTTTCAGCACTTAGAGACTTCCTTTCGTTA
JMFF018G12+ TGAACTGCTGTCTTTCAGCACTTAGAGACTTCCTTTCGTTA
____________________________________________________________
consensus TTCTCATCCATCTGTGACCTGAACTGCTGTCTTTCAGCACTTAGAGACTTCCTTTCGTTA
. : . : . : . : . : . :
JMSF045D09+ ATTAGCTCTGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
JMFF025P12+ ATTAGCTCTGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
JMFF019G03+ ATTAGCTCTGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
JMSF035A08+ ATTAGCTCTGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
JMFF005C18+ TGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
JMSF043A10+ ATTAGCTCTGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
JMFF018G12+ ATTAGCTCTGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
____________________________________________________________
consensus ATTAGCTCTGAGCGAGCTGCCCTTTTTGCTCTCAAGTTATCAATCATCACGCTTCGTGCT
. : . : . : . : . : . :
JMSF045D09+ TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
JMFF025P12+ TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
JMFF019G03+ TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
JMSF035A08+ TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
JMFF005C18+ TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
JMSF043A10+ TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
JMFF012B01+ TTCCAATTTGGCCTTCAGCTTCTGATCC
JMFF018G12+ TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
____________________________________________________________
consensus TGGTTCTTCTTGTGTAATTCCTTTTCAGCCTGTTCCAATTTGGCCTTCAGCTTCTGATCC
. : . : . : . : . : . :
JMSF045D09+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
JMFF025P12+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
JMFF019G03+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
JMSF035A08+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
JMFF005C18+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
JMSF043A10+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
JMFF012B01+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
JMFF018G12+ TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
____________________________________________________________
consensus TCAAATGTCCGATATTTAACCAAATAGAATGAATGAATCTGCTGAGGTGCAGGCCAATCC
. : . : . : . : . : . :
JMSF045D09+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
JMFF025P12+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
JMFF019G03+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
JMSF035A08+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
JMFF005C18+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTCTTCACATCCTCCTTGATT
JMSF043A10+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
JMFF012B01+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
JMFF018G12+ TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
____________________________________________________________
consensus TCAACCACTGCATCCTTTGGAAGGTTGATTGCAGGGGCTTTTTTCACATCCTCCTTGATT
. : . : . : . : . : . :
JMSF045D09+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMFF025P12+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMFF019G03+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMSF035A08+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMFF005C18+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMSF043A10+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMFF012B01+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMFF018G12+ GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
JMFF012O13+ GGCTCATTAGGAACAGTACCATTTTCC
____________________________________________________________
consensus GGCTCCTCAGCCCCATGGGAACCAAATTTTATGGGCTCATTAGGAACAGTACCATTTTCC
. : . : . : . : . : . :
JMSF045D09+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMFF025P12+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMFF019G03+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMSF035A08+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMFF005C18+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMSF043A10+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMFF012B01+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMFF018G12+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
JMFF012O13+ TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
____________________________________________________________
consensus TTCAAAGAACCACCATTCTCACTTCCAGTTTCAACCGATACATGAGCCAACTTAGATTCC
. : . : . : . : . : . :
JMSF045D09+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMFF025P12+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMFF019G03+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMSF035A08+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMFF005C18+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMSF043A10+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMFF012B01+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMFF018G12+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
JMFF012O13+ ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
____________________________________________________________
consensus ACATCTACACCCATGATTTCAATGAAAGCAAAATACAGACTGCCTTAGGGTGTCGTCTTC
. : . : . : . : . : . :
JMSF045D09+ AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMFF025P12+ AATCTACTCACCGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMFF019G03+ AATCTACTCACCGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMSF035A08+ AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMFF005C18+ AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMSF043A10+ AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMFF012B01+ AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMFF018G12+ AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
JMFF012O13+ AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
____________________________________________________________
consensus AATCT------CGTTGAGTTCCCCTTAGAGAAGAAACGTCTGAAACTCTGAAAACAGAGA
. : . : . : . : . : . :
JMSF045D09+ AACACAAAGAGAGATAGATAG
JMFF025P12+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTC
JMFF019G03+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTC
JMSF035A08+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTCTC
JMFF005C18+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTCTCTGTT
JMSF043A10+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTCTCTGTTT
JMFF012B01+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTCTCTGTTTT
JMFF018G12+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTCTCTGTTTT
JMFF012O13+ AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTCTCTGTTTTTGAAGAACAC
____________________________________________________________
consensus AACACAAAGAGAGATAGATAGAGTCAGACCCCAACAGATCTCTCTGTTTTTGAAGAACAC