Contig 003109:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011G23Sequence465003109 (5)ref|XP_004501107.1|75.1PREDICTED: uncharacterized protein LOC101504607, partial [Cicer arietinum]533019080gb|KDO53630.1|2e-46hypothetical protein CISIN_1g0158831mg, partial [Citrus sinensis] gb|KDO53631.1|
JMFF020N19Sequence581003109 (5)ref|XP_004501107.1|75.1PREDICTED: uncharacterized protein LOC101504607, partial [Cicer arietinum]
JMFN003L12Sequence627003109 (5)emb|CAN74167.1|4e-39hypothetical protein VITISV_010123 [Vitis vinifera]
JMFS125B04Sequence572003109 (5)ref|XP_004501107.1|67.0PREDICTED: uncharacterized protein LOC101504607, partial [Cicer arietinum]
JMFS125C04Sequence437003109 (5)ref|XP_004501107.1|67.0PREDICTED: uncharacterized protein LOC101504607, partial [Cicer arietinum]

Alignment

This contig is upended


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JMFN003L12+                                                     CACGCCTGCAATGTTNTG
                      ____________________________________________________________
consensus                                                       CACGCCTGCAATGTTNTG
 
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JMFN003L12+           AATTGCTTGAATTACATCCTNTGCATCAGCAAGCTGTGGTACCCACTTCGGTGACACAAA
                      ____________________________________________________________
consensus             AATTGCTTGAATTACATCCTNTGCATCAGCAAGCTGTGGTACCCACTTCGGTGACACAAA
 
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JMFN003L12+           ACTAGTAGCTTCGACGACTTCCAGCCCCGCAGAAACAAGCATTTGTATTAGTTCAACTTT
                      ____________________________________________________________
consensus             ACTAGTAGCTTCGACGACTTCCAGCCCCGCAGAAACAAGCATTTGTATTAGTTCAACTTT
 
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JMFN003L12+           CACACTTGTAGATATGATCTCCTTTTCATTTTGCAACCCATCTCTTGGACCTACTTCTAC
                      ____________________________________________________________
consensus             CACACTTGTAGATATGATCTCCTTTTCATTTTGCAACCCATCTCTTGGACCTACTTCTAC
 
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JMFN003L12+           TATCCTCACAAATTCAGGCAAAGATCCCAATACCTTATTTAAGCCTACACCATGTCGTGG
                      ____________________________________________________________
consensus             TATCCTCACAAATTCAGGCAAAGATCCCAATACCTTATTTAAGCCTACACCATGTCGTGG
 
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JMFN003L12+           ATTCAGTTGTGTGCTATAACAATGATGCAACATATGGAAAGCATTATGTGTGGTTCCAGT
                      ____________________________________________________________
consensus             ATTCAGTTGTGTGCTATAACAATGATGCAACATATGGAAAGCATTATGTGTGGTTCCAGT
 
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JMFN003L12+           AACACTAGTTTCTCGGGTAAAGGCAGGATTATGTGAAACTCTATTCGTTTGCCTTTGCCA
                      ____________________________________________________________
consensus             AACACTAGTTTCTCGGGTAAAGGCAGGATTATGTGAAACTCTATTCGTTTGCCTTTGCCA
 
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JMFN003L12+           TAGATATACTCTTCCATTGTCTTCCTCCCTGTCCATTTTACTCGAAGAGAACCGCTTCCC
JMFS125C04+                                          TCCATTTTACTCGAAGAGAACCGCTTCCC
JMFS125B04+                                          TCCATTTTACTCGAAGAGAACCGCTTCCC
JMFF020N19+                                          TCCATTTTACTCGAAGAGAACCGCTTCCC
JMFF011G23+                                          TCCATTTTACTCGAAGAGAACCGCTTCCC
                      ____________________________________________________________
consensus             TAGATATACTCTTCCATTGTCTTCCTCCCTGTCCATTTTACTCGAAGAGAACCGCTTCCC
 
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JMFN003L12+           -TTGTTCACCCTTGAAATTTTGGAGTTCCATTTCAGGAACACTGCCTAGAATATCATTAC
JMFS125C04+           -TTGTTCACCCTTGAAATTTTGGAGTTCCATTTCAGGAACACTGCCTAGAATATCATTAC
JMFS125B04+           -TTGTTCACCCTTGAAATTTTGGAGTTCCATTTCAGGAACACTGCCTAGAATATCATTAC
JMFF020N19+           TTTGTTCACCCTTGAAATTTTGGAGTTCCATTTCAGGAACACTGCCTAGAATATCATTAC
JMFF011G23+           -TTGTTCACCCTTGAAATTTTGGAGTTCCATTTCAGGAACACTGCCTAGAATATCATTAC
                      ____________________________________________________________
consensus             -TTGTTCACCCTTGAAATTTTGGAGTTCCATTTCAGGAACACTGCCTAGAATATCATTAC
 
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JMFN003L12+           CAAATACACTGCAAGCACCAAATCTCAACCTCGAAAATTTCCTGACAGCCTTATGTGATA
JMFS125C04+           CAAATACACTGCAAGCACCAAATCTCAACCTCGAAAATTTCCTGACAGCCTTATGTGATA
JMFS125B04+           CAAATACACTGCAAGCACCAAATCTCAACCTCGAAAATTTCCTGACAGCCTTATGTGATA
JMFF020N19+           CAAATACACTGCAAGCACCAAATCTCAACCTCGAAAATTTCCTGACAGCCTTATGTGATA
JMFF011G23+           CAAATACACTGCAAGCACCAAATCTCAACCTCGAAAATTTCCTGACAGCCTTATGTGATA
                      ____________________________________________________________
consensus             CAAATACACTGCAAGCACCAAATCTCAACCTCGAAAATTTCCTGACAGCCTTATGTGATA
 
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JMFN003L12+           ACATTGGATCACAACTTAATGTGTTGAAACAAACAACAGCTTATTCCAGATGTTTAC   
JMFS125C04+           ACATTGGATCACAACTTAATGTGTTGAAACAAACAGCAGCTTATTCCAGATGTTTACCTT
JMFS125B04+           ACATTGGATCACAACTTAATGTGTTGAAACAAACAACAGCTTATTCCAGATGTTTACCTT
JMFF020N19+           ACATTGGATCACAACTTAATGTGTTGAAACAAACAACAGCTTATTCCAGATGTTTACCTT
JMFF011G23+           ACATTGGATCACAACTTAATGTGTTGAAACAAACAACAGCTTATTCCAGATGTTTACCTT
                      ____________________________________________________________
consensus             ACATTGGATCACAACTTAATGTGTTGAAACAAACAACAGCTTATTCCAGATGTTTACCTT
 
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JMFS125C04+           CAAAGCTTATCTGTTCTGAGATTCAGTAGAGCTACGGAGCAGAAAAAACTCAAAGTTTAG
JMFS125B04+           CAAAGCTTATCTGTTCTGAGATTCAGTAGAGCTACGGAGCAGAAAAAACTCAAAGTTTAG
JMFF020N19+           CAAAGCTTATCTGTTCTGAGATTCAGTAGAGCTACGGAGCAGAAAAAACTCAAAGTTTAG
JMFF011G23+           CAAAGCTTATCTGTTCTGAGATTCAGTAGAGCTACGGAGCAGAAAAAACTCAAAGTTTAG
                      ____________________________________________________________
consensus             CAAAGCTTATCTGTTCTGAGATTCAGTAGAGCTACGGAGCAGAAAAAACTCAAAGTTTAG
 
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JMFS125C04+           CACAACCAGCTGAAAATATTGCAATTTTATGGAGAAATTTGCGAACAAATTCATAAGCGT
JMFS125B04+           CACAACCAGCTGAAAATATTGCAATTTTATGGAGAAATTTGCGAACAAATTCATAAGCGT
JMFF020N19+           CACAACCAGCTGAAAATATTGCAATTTTATGGAGAAATTTGCGAACAAATTCATAAGCGT
JMFF011G23+           CACAACCAGCTGACAATATTGCAATTTTATGGAGAAATTTGCGAACAAATTCATAAGCGT
                      ____________________________________________________________
consensus             CACAACCAGCTGAAAATATTGCAATTTTATGGAGAAATTTGCGAACAAATTCATAAGCGT
 
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JMFS125C04+           GTTTCAGTTTTCGGGTTCAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTT
JMFS125B04+           GTTTCAGTTTTCGGGTTCAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTT
JMFF020N19+           GTTTCAGTTTTCGGGTTCAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTT
JMFF011G23+           GTTTCAGTTTTCGGGTTCAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTT
                      ____________________________________________________________
consensus             GTTTCAGTTTTCGGGTTCAAAAAAATTTGGACCATTTCTCGATTTGTGCGTGTCATCCTT
 
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JMFS125C04+           GCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGA            
JMFS125B04+           GCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGA            
JMFF020N19+           GCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCTCCGAAG 
JMFF011G23+           GCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCTCCGAAGA
                      ____________________________________________________________
consensus             GCGCAGGGGCCATGCTAATCTTCTCTGTATCGTTCCAATTTTATCGGATGTCTCCGAAGA