Contig 003104:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010L18Sequence510003104 (3)gb|AAQ18911.1|2e-62sucrose synthase [Actinidia deliciosa]233006915 (3)
JMFF040C20Sequence498003104 (3)gb|AAQ18911.1|6e-79sucrose synthase [Actinidia deliciosa]559006915 (3)gb|AAM22755.1|3e-60sucrose synthase [Deschampsia antarctica]
JMFS167F08Sequence627003104 (3)ref|XP_009601288.1|4e-102PREDICTED: sucrose synthase 2-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS167F08+                          AAGAGCATGCCCTTTGTGTNTGTGTACTCTAAGGAAATCAAGTAA
                      ____________________________________________________________
consensus                            AAGAGCATGCCCTTTGTGTNTGTGTACTCTAAGGAAATCAAGTAA
 
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JMFS167F08+           AGGCTCCAAAGAATCTTTGTTGCGGAACATGATTGAAGAGAGATGCCGGTTGAGGAATAT
                      ____________________________________________________________
consensus             AGGCTCCAAAGAATCTTTGTTGCGGAACATGATTGAAGAGAGATGCCGGTTGAGGAATAT
 
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JMFF040C20+                    TCCAATTGATGATGATCTGGTGGGTCGTGGAATTGATACATTGAACGGCTC
JMFS167F08+           AACCCCATTTCCAATTGATGATGATCTGGTGGGTCGTGGAATTGATACATTGAACGGCTC
                      ____________________________________________________________
consensus             AACCCCATTTCCAATTGATGATGATCTGGTGGGTCGTGGAATTGATACATTGAACGGCTC
 
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JMFF040C20+           AAAATCAAGCTCAAGGATGAACTGCCCACATTTCTGCCCATCAGCAAGTTCTTCCTTGAA
JMFS167F08+           AAAATCAAGCTCAAGGATGAACTGCCCACATTTCTGCCCATCAGCAAGTTCTTCCTTGAA
JMFF010L18+                                         TTTCTGCCCATCAGCAAGTTCTTCCTTGAA
                      ____________________________________________________________
consensus             AAAATCAAGCTCAAGGATGAACTGCCCACATTTCTGCCCATCAGCAAGTTCTTCCTTGAA
 
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JMFF040C20+           ACCAAGGTACTCAGAAATTGTCAATTCATCAACACTCAGTTCATACACATTGACGCGCAC
JMFS167F08+           ACCAAGGTACTCAGAAATTGTCAATTCATCAACACTCAGTTCATACACATTGACGCGCAC
JMFF010L18+           ACCAAGGTACTCAGAAATTGTCAATTCATCAACACTCAGTTCATACACATTGACGCGCAC
                      ____________________________________________________________
consensus             ACCAAGGTACTCAGAAATTGTCAATTCATCAACACTCAGTTCATACACATTGACGCGCAC
 
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JMFF040C20+           AAACTCCCAAACGCCTGGCCTCGGACGGATAGCTAAAGCAACAAACGGGGGAAGCACTAT
JMFS167F08+           AAACTCCCAAACGCCTGGCCTCGGACGGATAGCTAAAGCAACAAACGGGGGAAGCACTAT
JMFF010L18+           AAACTCCCAAACGCCTGGCCTCGGACGGATAGCTAAAGCAACAAACGGGGGAAGCACTAT
                      ____________________________________________________________
consensus             AAACTCCCAAACGCCTGGCCTCGGACGGATAGCTAAAGCAACAAACGGGGGAAGCACTAT
 
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JMFF040C20+           GGCTTCCTGAGCAGATTTCAAGACTTCACTGAAGGGACCATCACTGAGCTTCACACCCGC
JMFS167F08+           GGCTTCCTGAGCAGATTTCAAGACTTCACTGAAGGGACCATCACTGAGCTTCACACCCGC
JMFF010L18+           GGCTTCCTGAGCAGATTTCAAGACTTCACTGAAGGGACCATCACTGAGCTTCACACCCGC
                      ____________________________________________________________
consensus             GGCTTCCTGAGCAGATTTCAAGACTTCACTGAAGGGACCATCACTGAGCTTCACACCCGC
 
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JMFF040C20+           AGTTTCATTGCAGCTAACGTTGTTAAGCTCGTCGATCAGGTTGTGCGGTTGCAATATCCC
JMFS167F08+           AGTTTCATTGCAGCTAACGTTGTTAAGCTCGTCGATCAGGTTGTGCGGTTGCAATATCCC
JMFF010L18+           AGTTTCATTGCAGCTAACGTTGTTAAGCTCGTCGATCAGGTTGTGCGGTTGCAATATCCC
                      ____________________________________________________________
consensus             AGTTTCATTGCAGCTAACGTTGTTAAGCTCGTCGATCAGGTTGTGCGGTTGCAATATCCC
 
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JMFF040C20+           CTTCCCCTGTGCCACAAATCTGGAGAGAAGAGCAACGAGTTCATTTCTGTGAGCAGAGAG
JMFS167F08+           CTTCCCCTGTGCCACAAATCTGGAGAGAAGAGCAACGAGTTCATTTCTGTGAGCAGAGAG
JMFF010L18+           CTTCCCCTGTGCCACAAATCTGGAGAGAAGAGCAACGAGTTCATTTCTGTGAGCAGAGAG
                      ____________________________________________________________
consensus             CTTCCCCTGTGCCACAAATCTGGAGAGAAGAGCAACGAGTTCATTTCTGTGAGCAGAGAG
 
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JMFF040C20+           AGTGCCCTCCACTCTCTCCCTCATACTAGGAATCCTCCCGAGCTTATGACCCGACATCGA
JMFS167F08+           AGTGCCCTCCACTCTCTCCCTCATACTAGGAATCCTCCCGAGCTTATGACCCGACATCGA
JMFF010L18+           AGTGCCCTCCACTCTCTCCCTCATACTAGGAATCCTCCCGAGCTTATGACCCGACATCGA
                      ____________________________________________________________
consensus             AGTGCCCTCCACTCTCTCCCTCATACTAGGAATCCTCCCGAGCTTATGACCCGACATCGA
 
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JMFF040C20+           GATTCTCCAGCGCTTCCTCTTCAATTC                                 
JMFS167F08+           GATTCTCCAGCGCTTCCTCTTCAATTCACAAAATTGACTGAA                  
JMFF010L18+           GATTCTCCAGCGCTTCCTCTTCAATTCACAAAATTGACTGAACACTCGGATCGTTTGCGG
                      ____________________________________________________________
consensus             GATTCTCCAGCGCTTCCTCTTCAATTCACAAAATTGACTGAACACTCGGATCGTTTGCGG
 
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JMFF010L18+           GAATTTATTTGTATGAATTTTGGGGTGCTTTTTGCAGTGAGCTGATAATTGATACAGACC
                      ____________________________________________________________
consensus             GAATTTATTTGTATGAATTTTGGGGTGCTTTTTGCAGTGAGCTGATAATTGATACAGACC