Contig 003100:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010H06Sequence492003100 (2)ref|XP_009589535.1|4e-51PREDICTED: centlein-like [Nicotiana tomentosiformis]763009635 (2)ref|XP_010320190.1|3e-57PREDICTED: uncharacterized protein LOC101266817 isoform X1 [Solanum lycopersicu
JMFF035A19Sequence532003100 (2)ref|XP_009589535.1|8e-61PREDICTED: centlein-like [Nicotiana tomentosiformis]759009635 (2)ref|XP_010320190.1|2e-56PREDICTED: uncharacterized protein LOC101266817 isoform X1 [Solanum lycopersicu

Alignment

This contig is upended


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JMFF035A19+                   TCCGCCTCATTCCCAAAATCCATCAATGCCTCTCGGTCACGGTCGTACAACG
JMFF010H06+                                                           GGTCGTACAACG
                      ____________________________________________________________
consensus                     TCCGCCTCATTCCCAAAATCCATCAATGCCTCTCGGTCACGGTCGTACAACG
 
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JMFF035A19+           AGCACTCTCTCTCCCATCTCTTGCACTGCGCCAACAAATTCGAGCACTCCACCGCCAGTC
JMFF010H06+           AGCACTCTCTCTCCCATCTCTTGCACTGCGCCAACAAATTCGAGCACTCCACCGCCAGTC
                      ____________________________________________________________
consensus             AGCACTCTCTCTCCCATCTCTTGCACTGCGCCAACAAATTCGAGCACTCCACCGCCAGTC
 
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JMFF035A19+           TCTGATTCTCCTCCACGAACTTCTTCAACGCAGCCGCATTCATACTCGCCTCAGCCCTAG
JMFF010H06+           TCTGATTCTCCTCCACGAACTTCTTCAACGCAGCCGCATTCATACTCGCCTCAGCCCTAG
                      ____________________________________________________________
consensus             TCTGATTCTCCTCCACGAACTTCTTCAACGCAGCCGCATTCATACTCGCCTCAGCCCTAG
 
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JMFF035A19+           TGCGCTCAACGACGTCATCCTTTTCTTTTAGTTTCGATTGCAAGAAAAGACAGTGATTGC
JMFF010H06+           TGCGCTCAACGACGTCATCCTTTTCTTTTAGTTTCGATTGCAAGAAAAGACAGTGATTGC
                      ____________________________________________________________
consensus             TGCGCTCAACGACGTCATCCTTTTCTTTTAGTTTCGATTGCAAGAAAAGACAGTGATTGC
 
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JMFF035A19+           GGAGCAGGAGAAGTGATTGTTCGGACGCTTGAAGCTTCAATTGAAGAGTTTGAGTCGAGA
JMFF010H06+           GGAGCAGGAGAAGTGATTGTTCGGACGCTTGAAGCTTCAATTGAAGAGTTTGAGTCGAGA
                      ____________________________________________________________
consensus             GGAGCAGGAGAAGTGATTGTTCGGACGCTTGAAGCTTCAATTGAAGAGTTTGAGTCGAGA
 
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JMFF035A19+           CGGGGAGGCCAAGAGTGTGCTCGATCGATTCTCGAATATAATCATCAGTTTCACGAGAAA
JMFF010H06+           CGGGGAGGCCAAGAGTGTGCTCGATCGATTCTCGAATATAATCATCAGTTTCACGAGAAA
                      ____________________________________________________________
consensus             CGGGGAGGCCAAGAGTGTGCTCGATCGATTCTCGAATATAATCATCAGTTTCACGAGAAA
 
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JMFF035A19+           TCTCCATCTTTTTTACTGAACTTCCAAAAATCCAGAAGAATCTATCACCAGAGAAATTCG
JMFF010H06+           TCTCCATCTTTTTTACTGAACTTCCAAAAATCCAGAAGAATCTATCACCAGAGAAATTCG
                      ____________________________________________________________
consensus             TCTCCATCTTTTTTACTGAACTTCCAAAAATCCAGAAGAATCTATCACCAGAGAAATTCG
 
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JMFF035A19+           AAGCGCCGAACAATCTCAATGAGTGAGGAATGCGAGAGAGGTGGGGCTGATCGGAAACTG
JMFF010H06+           AAGCGCCGAACAATCTCAATGAGTGAGGAATGCGAGAGAGGTGGGGCTGATCGGAAACTG
                      ____________________________________________________________
consensus             AAGCGCCGAACAATCTCAATGAGTGAGGAATGCGAGAGAGGTGGGGCTGATCGGAAACTG
 
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JMFF035A19+           GGATTTTGGGTCTGCTCAGAAAAGATTGGAAAATTTTTTGAGATTTCAAATTGGGGAAGT
JMFF010H06+           GGATTTTGGGTCTGCTCAGAAAAGATTGGAAAATTTTTTGAGATTTCAAATTGGGGAAGT
                      ____________________________________________________________
consensus             GGATTTTGGGTCTGCTCAGAAAAGATTGGAAAATTTTTTGAGATTTCAAATTGGGGAAGT