| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010A13 | Sequence | 589 | 003098 (5) | ref|XP_006349391.1| | 111 | PREDICTED: uncharacterized protein LOC102583411 [Solanum tuberosum] | |||||
| JMFF018M01 | Sequence | 584 | 003098 (5) | ref|XP_006349391.1| | 107 | PREDICTED: uncharacterized protein LOC102583411 [Solanum tuberosum] | 766 | 013687 (4) | ref|XP_009630598.1| | 5e-67 | PREDICTED: uncharacterized protein LOC104120526 isoform X3 [Nicotiana tomentosi |
| JMSF007J07 | Sequence | 306 | 003098 (5) | 773 | 013687 (4) | ref|XP_009630598.1| | 3e-67 | PREDICTED: uncharacterized protein LOC104120526 isoform X3 [Nicotiana tomentosi | |||
| JMSF038O12 | Sequence | 582 | 003098 (5) | ref|XP_006349391.1| | 114 | PREDICTED: uncharacterized protein LOC102583411 [Solanum tuberosum] | 760 | 013687 (4) | ref|XP_009630598.1| | 3e-90 | PREDICTED: uncharacterized protein LOC104120526 isoform X3 [Nicotiana tomentosi |
| JMSF044H02 | Sequence | 754 | 003098 (5) | ref|XP_006349391.1| | 223 | PREDICTED: uncharacterized protein LOC102583411 [Solanum tuberosum] | 765 | 013687 (4) | ref|XP_009630598.1| | 2e-77 | PREDICTED: uncharacterized protein LOC104120526 isoform X3 [Nicotiana tomentosi |
This contig is upended
. : . : . : . : . : . :
JMSF044H02+ TGAAAGAAACCTAAAGCAGCAATACTCCACCAAATTGCGGGCATCATTA
____________________________________________________________
consensus TGAAAGAAACCTAAAGCAGCAATACTCCACCAAATTGCGGGCATCATTA
. : . : . : . : . : . :
JMSF044H02+ TAGATAGATTCAGGAACAAGAGCTTTAAAAATCTTCTGCATTTTCTGCCCGGTCAACCCA
____________________________________________________________
consensus TAGATAGATTCAGGAACAAGAGCTTTAAAAATCTTCTGCATTTTCTGCCCGGTCAACCCA
. : . : . : . : . : . :
JMSF044H02+ TTCATCCGGCTGAATTGCTCAACGGAGAGAATAGCAGCCACTGAAAGCTCCCCACTTGGT
____________________________________________________________
consensus TTCATCCGGCTGAATTGCTCAACGGAGAGAATAGCAGCCACTGAAAGCTCCCCACTTGGT
. : . : . : . : . : . :
JMSF044H02+ GTTTGCCTATCAACAGTCTGTTCAGACAGGAATATCTCATCCACATCTTGAGCATGATCC
JMSF038O12+ CAACAGTCTGTTCAGACAGGAATATCTCATCCACATCTTGAGCATGATCC
JMFF018M01+ GTCTGTTCAGACAGGAATATCTCATCCACATCTTGAGCATGATCC
JMFF010A13+ GTCTGTTCAGACAGGAATATCTCATCCACATCTTGAGCATGATCC
____________________________________________________________
consensus GTTTGCCTATCAACAGTCTGTTCAGACAGGAATATCTCATCCACATCTTGAGCATGATCC
. : . : . : . : . : . :
JMSF044H02+ CGTAAAGTAGACCTTCGATCGTTGACAGTTTTTACCAATGGTGAAGTGACGTCATGCAGA
JMSF038O12+ CGTAAAGTAGACCTTCGATCGTTGACAGTTTTTACCAATGGTGAAGTGACGTCATGCAGA
JMFF018M01+ CGTAAAGTAGACCTTCGATCGTTGACAGTTTTTACCAATGGTGAAGTGACGTCATGCAGA
JMFF010A13+ CGTAAAGTAGACCTTCGATCGTTGACAGTTTTTACCAATGGTGAAGTGACGTCATGCAGA
____________________________________________________________
consensus CGTAAAGTAGACCTTCGATCGTTGACAGTTTTTACCAATGGTGAAGTGACGTCATGCAGA
. : . : . : . : . : . :
JMSF044H02+ AAGTTTTGGGTCTTTGACAGCCATTGAGTTAATGATTCTTGCACTGAATTGGCATCAATA
JMSF038O12+ AAGTTTTGGGTCTTTGACAGCCATTGAGTTAATGATTCTTGCACTGAATTGGCATCAATA
JMFF018M01+ AAGTTTTGGGTCTTTGACAGCCATTGAGTTAATGATTCTTGCACTGAATTGGCATCAATA
JMFF010A13+ AAGTTTTGGGTCTTTGACAGCCATTGAGTTAATGATTCTTGCACTGAATTGGCATCAATA
____________________________________________________________
consensus AAGTTTTGGGTCTTTGACAGCCATTGAGTTAATGATTCTTGCACTGAATTGGCATCAATA
. : . : . : . : . : . :
JMSF044H02+ TCATTGAACTTCCATTTCCCGTCGCCCAACGATCTACCCGCGAGCTTAAACCGGAACTTG
JMSF038O12+ TCATTGAACTTCCATTTCCCGTCGCCCANCGATCTACCCGCGAGCTTAAACCGGAACTTG
JMFF018M01+ TCATTGAACTTCCATTTCCCGTCGCCCAACGATCTACCCGCGAGCTTAAACCGGAACTTG
JMSF007J07+ TTCCATTTCCCGTCGCCCAACGATCTACCCGCGAGCTTAAACCGGAACTTG
JMFF010A13+ TCATTGAACTTCCATTTCCCGTCGCCCAACGATCTACCCGCGAGCTTAAACCGGAACTTG
____________________________________________________________
consensus TCATTGAACTTCCATTTCCCGTCGCCCAACGATCTACCCGCGAGCTTAAACCGGAACTTG
. : . : . : . : . : . :
JMSF044H02+ CTATTCTCTGACGCCGAAGAAGAGGAGGAGGAAGCGTCAGAGTTCTTATCGCCACAGCAC
JMSF038O12+ CTATTCTCTGACGCCGAAGAAGAGGAGGAGGAAGCGTCAGAGTTNTTATCGCCACAGCAC
JMFF018M01+ CTATTCTCTGACGCCGAAGAAGAGGAGGAGGAAGCGTCAGAGTTCTTATCGCCACAGCAC
JMSF007J07+ CTATTCTCTGACGCCGAAGAAGAGGAGGAGGAAGCGTCAGAGTTCTTATCGCCACAGCAC
JMFF010A13+ CTATTCTCTGACGCCGAAGAAGAGGAGGAGGAAGCGTCAGAGTTCTTATCGCCACAGCAC
____________________________________________________________
consensus CTATTCTCTGACGCCGAAGAAGAGGAGGAGGAAGCGTCAGAGTTCTTATCGCCACAGCAC
. : . : . : . : . : . :
JMSF044H02+ AGAATCCTGAACAAGATTGGGTGATGCTGTCGAGGCTGGGGAAAAACTGGGAAAGCTGGA
JMSF038O12+ AGAATCNTGAACAAGATTGGGTGATGCTGTCGAGGCTGGGGAAAAACTGGGAAAGCTGGA
JMFF018M01+ AGAATCCTGAACAAGATTGGGTGATGCTGTCGAGGCTGGGGAAAAACTGGGAAAGCTGGA
JMSF007J07+ AGAATCCTGAACAAGATTGGGTGATGCTGTCGAGGCTGGGGAAAAACTGGGAAAGCTGGA
JMFF010A13+ AGAATCCTGAACAAGATTGGGTGATGCTGTCGAGGCTGGGGAAAAACTGGGAAAGCTGGA
____________________________________________________________
consensus AGAATCCTGAACAAGATTGGGTGATGCTGTCGAGGCTGGGGAAAAACTGGGAAAGCTGGA
. : . : . : . : . : . :
JMSF044H02+ GGGGCCTTTCCCAACTTGCAGTACATCGTTTTGTTCCCCGTTTCTCGTTACGGAGATTCA
JMSF038O12+ GGGGCCTTTCCCAACTTGCAGTACATCGTTTTGTTCCCCGTTTCTCGTTACGGAGATTCA
JMFF018M01+ GGGGCCTTTCCCAACTTGCAGTACATCGTTTTGTTCCCCGTTTCTCGTTACGGAGATTCA
JMSF007J07+ GGGGCCTTTCCCAACTTGCAGTACATCGTTTTGTTCCCCGTTTCTCGTTACGGAGATTCA
JMFF010A13+ GGGGCCTTTCCCAACTTGCAGTACATCGTTTTGTTCCCCGTTTCTCGTTACGGAGATTCA
____________________________________________________________
consensus GGGGCCTTTCCCAACTTGCAGTACATCGTTTTGTTCCCCGTTTCTCGTTACGGAGATTCA
. : . : . : . : . : . :
JMSF044H02+ GGAATCATTGAATCCTCTGGATTTTCTGATCCCCCGAGAAGATGAAAAGCATTAGCCGGT
JMSF038O12+ GGAATCATNGAATCCTCTGGATTTTCTGATCCCCCGAGAAGATGAAAAGCATTAGCCGGT
JMFF018M01+ GGAATCATTGAATCCTCTGGATTTTCTGATCCCCCGAGAAGATGAAAAGCATTAGCCGGT
JMSF007J07+ GGAATCATTGAATCCTCTGGATTTTCTGATCCCCCGAGAAGATGAAAAGCATTAGCCGGT
JMFF010A13+ GGAATCATTGAATCCTCTGGATTTTCTGATCCCCCGAGAAGATGAAAAGCATTAGCCGGT
____________________________________________________________
consensus GGAATCATTGAATCCTCTGGATTTTCTGATCCCCCGAGAAGATGAAAAGCATTAGCCGGT
. : . : . : . : . : . :
JMSF044H02+ GCGCCGAAGAAGACAACTAGACAAGGGGATGTTTCACACAGAAACTATGATTGGTCTTCG
JMSF038O12+ GCGCCGAAGAAGACAACTAGACAAGGGGATGTTTCACACAGAAACTATGATTGGTCTTCG
JMFF018M01+ GCGCCGAAGAAGACAACTAGACAAGGGGATGTTTCACACAGAAACTATGATTGGTCTTCG
JMSF007J07+ GCGCCGAAGAAGAC
JMFF010A13+ GCGCCGAAGAAGACAACTAGACAAGGGGATGTTTCACACAGAAACTATGATTGGTCTTCG
____________________________________________________________
consensus GCGCCGAAGAAGACAACTAGACAAGGGGATGTTTCACACAGAAACTATGATTGGTCTTCG
. : . : . : . : . : . :
JMSF044H02+ AAGAAGACAAACGTTCACCTA-CACGGCTGCGCGGTTGTTAATCC
JMSF038O12+ AAGAAGACAAACGTTCACNTATCACGGCTGCGCGGTTGTTAATCC
JMFF018M01+ AAGAAGACAAACGTTCACCTA-CACGGCTGCGCGGTTGTTAATCCATTTCTAATATTCTT
JMFF010A13+ AAGAAGACAAACGTTCACCTA-CACGGCTGCGCGGTTGTTAATCCATTTCTAATATTCTT
____________________________________________________________
consensus AAGAAGACAAACGTTCACCTA-CACGGCTGCGCGGTTGTTAATCCATTTCTAATATTCTT