clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004O01 | Sequence | 568 | 003097 (5) | ref|XP_008779796.1| | 2e-58 | PREDICTED: magnesium transporter NIPA2-like, partial [Phoenix dactylifera] | 716 | 001227 (5) | |||
JMFF009N23 | Sequence | 574 | 003097 (5) | ref|XP_009760351.1| | 239 | PREDICTED: probable magnesium transporter NIPA7 [Nicotiana sylvestris] | 771 | 001227 (5) | ref|XP_011043800.1| | 52.4 | PREDICTED: probable magnesium transporter NIPA7 [Populus euphratica] |
JMFF047C14 | Sequence | 421 | 003097 (5) | ref|XP_008779796.1| | 3e-44 | PREDICTED: magnesium transporter NIPA2-like, partial [Phoenix dactylifera] | 373 | 001227 (5) | |||
JMFF048K10 | Sequence | 428 | 003097 (5) | ref|XP_008779796.1| | 1e-41 | PREDICTED: magnesium transporter NIPA2-like, partial [Phoenix dactylifera] | 410 | 001227 (5) | |||
JMSF048I23 | Sequence | 697 | 003097 (5) | ref|XP_010931997.1| | 4e-100 | PREDICTED: probable magnesium transporter NIPA3 isoform X2 [Elaeis guineensis] | 711 | 001227 (5) |
This contig is upended
. : . : . : . : . : . :
JMSF048I23+ CCCT
____________________________________________________________
consensus CCCT
. : . : . : . : . : . :
JMSF048I23+ CAAAAGTTAGTTTCAGTGAAGTTCCAAGGGCTTTGACACTCATGACCGAGAGAGAACCCA
____________________________________________________________
consensus CAAAAGTTAGTTTCAGTGAAGTTCCAAGGGCTTTGACACTCATGACCGAGAGAGAACCCA
. : . : . : . : . : . :
JMSF048I23+ TCAGTGAACAAATTCCAGTGTAAATAAGTACATTGGTATGAGCATATTCAGGTGCAAGAT
____________________________________________________________
consensus TCAGTGAACAAATTCCAGTGTAAATAAGTACATTGGTATGAGCATATTCAGGTGCAAGAT
. : . : . : . : . : . :
JMSF048I23+ AGAAGACGAGAATAAACACCAAAATGAGTACCGATCCCACATAGGCCAAAAAGGCTGTCT
JMFF004O01+ GATCCCACATAGGCCAAAAAGGCTGTNT
JMFF009N23+ GATCCCACATAGGCCAAAAAGGCTGTCT
____________________________________________________________
consensus AGAAGACGAGAATAAACACCAAAATGAGTACCGATCCCACATAGGCCAAAAAGGCTGTCT
. : . : . : . : . : . :
JMSF048I23+ GCGTTGCCATGTACCAGACTTCCTTGACAGAAGAGATAGGGCGCT-CCTGTGGTGCATGG
JMFF004O01+ GCGTTGCCATGTACCAGACTTCCTTGACAGAAGAGATAGGGCGCTCCCTGTGGTGCATGG
JMFF009N23+ GCGTTGCCATGTACCAGACTTCCTTGACAGAAGAGATAGGGCGCT-CCTGTGGTGCATGG
____________________________________________________________
consensus GCGTTGCCATGTACCAGACTTCCTTGACAGAAGAGATAGGGCGCT-CCTGTGGTGCATGG
. : . : . : . : . : . :
JMSF048I23+ ATCACGATTATGACAGAACCGGCAATGCACATAACACAGCCCAAGATTCCTAGCAGATGC
JMFF004O01+ ATCACGATTATGACAGAACCGGCAATGCACATAACACAGCCCAAGATTCNTAGCAGATGC
JMFF047C14+ AGCAGATGC
JMFF009N23+ ATCACGATTATGACAGAACCGGCAATGCACATAACACAGCCCAAGATTCCTAGCAGATGC
____________________________________________________________
consensus ATCACGATTATGACAGAACCGGCAATGCACATAACACAGCCCAAGATTCCTAGCAGATGC
. : . : . : . : . : . :
JMSF048I23+ AACTTTTCTTTCAAGACAATATGAGCCAATATAGCACTGACAATGATACTCAGTGCGCCA
JMFF004O01+ AACTTTTCTTTCAAGACAATATGAGCCAATATAGCACTGACAATGATACTCAGTGCGCCA
JMFF047C14+ AACTTTTCTTTCAAGACAATATGAGCCAATATAGCACTGACAATGATACTCAGTGCGCCA
JMFF048K10+ TTTCTTTCAAGACAATATGAGCCAATATAGCACTGACAATGATACTCAGTGCGCCA
JMFF009N23+ AACTTTTCTTTCAAGACAATATGAGCCAATATAGCACTGACAATGATACTCAGTGCGCCA
____________________________________________________________
consensus AACTTTTCTTTCAAGACAATATGAGCCAATATAGCACTGACAATGATACTCAGTGCGCCA
. : . : . : . : . : . :
JMSF048I23+ AGAGGGGTCACAAGAACAGCAGGGGCAAATGCATATGCCACGAAGTTTGCAATCTCTCCA
JMFF004O01+ AGAGGGGTCACAAGAACAGCAGGGGCAAATGCATATGCCACGAAGTTTGCAATCTCTCCA
JMFF047C14+ AGAGGGGTCACAAGAACAGCAGGGGCAAATGCATATGCCACGAAGTTTGCAATCTCTCCA
JMFF048K10+ AGAGGGGTCACAAGAACAGCAGGGGCAAATGCATATGCCACGAAGTTTGCAATCTCTCCA
JMFF009N23+ AGAGGGGTCACAAGAACAGCAGGGGCAAATGCATATGCCACGAAGTTTGCAATCTCTCCA
____________________________________________________________
consensus AGAGGGGTCACAAGAACAGCAGGGGCAAATGCATATGCCACGAAGTTTGCAATCTCTCCA
. : . : . : . : . : . :
JMSF048I23+ ACAATCATTGTGACCATTCCAAACCACCAGAGAGGTTCCAATAGATACGAGTAGCCACCA
JMFF004O01+ ACAATCATTGTGACCATTCCAAACCACCAGAGAGGTTCCAATAGATACGAGTAGCCACCA
JMFF047C14+ ACAATCATTGTGACCATTCCAAACCACCAGAGAGGTTCCAATAGATACGAGTAGCCACCA
JMFF048K10+ ACAATCATTGTGACCATTCCAAACCACCAGAGAGGTTCCAATAGATACGAGTAGCCACCA
JMFF009N23+ ACAATCATTGTGACCATTCCAAACCACCAGAGAGGTTCCAATAGATACGAGTAGCCACCA
____________________________________________________________
consensus ACAATCATTGTGACCATTCCAAACCACCAGAGAGGTTCCAATAGATACGAGTAGCCACCA
. : . : . : . : . : . :
JMSF048I23+ ACACCGGCTCTGACACCAGAAACAGCAGCTGCTCTTCTGAGTCCTTTCTTCTTGATGATG
JMFF004O01+ ACACCGGCTCTGACACCAGAAACAGCAGCTGCTCTTCTGAGTCCTTTCTTCTTGATGATG
JMFF047C14+ ACACCGGCTCTGACACCAGAAACAGCAGCTGCTCTTCTGAGTCCTTTCTTCTTGATGATG
JMFF048K10+ ACACCGGCTCTGACACCAGAAACAGCAGCTGCTCTTCTGAGTCCTTTCTTCTTGATGATG
JMFF009N23+ ACACCGGCTCTGACACCAGAAACAGCAGCTGCTCTTCTGAGTCCTTTCTTCTTGATGATG
____________________________________________________________
consensus ACACCGGCTCTGACACCAGAAACAGCAGCTGCTCTTCTGAGTCCTTTCTTCTTGATGATG
. : . : . : . : . : . :
JMSF048I23+ AAGCTGGCCCCTATGAAAGCACTTGAGAGCAGAGCCAACCCAATCCCACAAACGTTGTCT
JMFF004O01+ AAGCTGGCCCCTATGAAAGCACTTGAGAGCAGAGCCAACCCAATCCCACAAACGTTGTCT
JMFF047C14+ AAGCTGGCCCCTATGAAAGCACTTGAGAGCAGAGCCAACCCAATCCCACAAACGTTGTCT
JMFF048K10+ AAGCTGGCCCCTATGAAAGCACTTGAGAGCAGAGCCAACCCAATCCCACAAACGTTGTCT
JMFF009N23+ AAGCTGGCCCCTATGAAAGCACTTGAGAGCAGAGCCAACCCAATCCCACAAACGTTGTCT
____________________________________________________________
consensus AAGCTGGCCCCTATGAAAGCACTTGAGAGCAGAGCCAACCCAATCCCACAAACGTTGTCT
. : . : . : . : . : . :
JMSF048I23+ CTGGAGAAACCCATTGTGATGTCTTCTTCGCAGTACAAAACGTTACCTTGATCTTACGAT
JMFF004O01+ CTGGAGAAACCCATTGTGATGTCTTCTTCGCAGTACAAAACGTTACCTTGATCTTACGAT
JMFF047C14+ CTGGAGAAACCCATTGTGATGTCTTCTTCGCAGTACAAAACGTTACCTTGATCTTACGAT
JMFF048K10+ CTGGAGAAACCCATTGTGATGTCTTCTTCGCAGTACAAAACGTTACCTTGATCTTACGAT
JMFF009N23+ CTGGAGAAACCCATTGTGATGTCTTCTTCGCAGTACAAAACGTTACCTTGATCTTACGAT
____________________________________________________________
consensus CTGGAGAAACCCATTGTGATGTCTTCTTCGCAGTACAAAACGTTACCTTGATCTTACGAT
. : . : . : . : . : . :
JMSF048I23+ CCTTGGGTCTCCCCTCCCACCAGTCCACCAC
JMFF004O01+ CCTTGGGTCTCCCCTCCCACCAGTCCACCACTAATGACTTGGGGGAGAAAACCCACCATC
JMFF047C14+ CCTTGGGTCTCCCCTCCCACCAGTCCACCACTAATGACTTGGGGGAGAAAAC
JMFF048K10+ CCTTGGGTCTCCCCTCCCACCAGTCCACCACTAATGACTTGGGGGAGAAAACCCACCATC
JMFF009N23+ CCTTGGGTCTCCCCTCCCACCAGTCCACCACTAATGACTTGGGGGAGAAAACCCACCATC
____________________________________________________________
consensus CCTTGGGTCTCCCCTCCCACCAGTCCACCACTAATGACTTGGGGGAGAAAACCCACCATC