| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009J09 | Sequence | 555 | 003094 (4) | ref|XP_009801863.1| | 1e-76 | PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris] | 703 | 010992 (6) | ref|XP_009760946.1| | 4e-37 | PREDICTED: lysosomal beta glucosidase-like [Nicotiana sylvestris] |
| JMFF012A22 | Sequence | 551 | 003094 (4) | ref|XP_009801863.1| | 1e-76 | PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris] | 706 | 010992 (6) | ref|XP_006361125.1| | 7e-71 | PREDICTED: lysosomal beta glucosidase-like [Solanum tuberosum] |
| JMFF024C02 | Sequence | 538 | 003094 (4) | ref|XP_009801863.1| | 5e-74 | PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris] | 705 | 010992 (6) | ref|XP_006361125.1| | 4e-70 | PREDICTED: lysosomal beta glucosidase-like [Solanum tuberosum] |
| JMFF033I20 | Sequence | 532 | 003094 (4) | ref|XP_009801863.1| | 1e-56 | PREDICTED: lysosomal beta glucosidase-like isoform X1 [Nicotiana sylvestris] | 746 | 010992 (6) | ref|XP_009786310.1| | 4e-105 | PREDICTED: lysosomal beta glucosidase-like [Nicotiana sylvestris] ref|XP_0097863 |
This contig is upended
. : . : . : . : . : . :
JMFF012A22+ TGGTGACGCCTAGCC
JMFF024C02+ CC
JMFF033I20+ CC
JMFF009J09+ CTGGTGACGCCTAGCC
____________________________________________________________
consensus CTGGTGACGCCTAGCC
. : . : . : . : . : . :
JMFF012A22+ CGATATTGTGAGGAAAAATGGTGGCCTTGTAGACGTTGTTGTGGCCATGAACTGCATCAA
JMFF024C02+ CGATATTGTGAGGAAAAATGGTGGCCTTGTAGACGTTGTTGTGGCCATGAACTGCATCAA
JMFF033I20+ CGATATTGTGAGGAAAAATGGTGGCCTTGTAGACGTTGTTGTGGCCATGAACTGCATCAA
JMFF009J09+ CGATATTGTGAGGAAAAATGGTGGCCTTGTAGACGTTGTTGTGGCCATGAACTGCATCAA
____________________________________________________________
consensus CGATATTGTGAGGAAAAATGGTGGCCTTGTAGACGTTGTTGTGGCCATGAACTGCATCAA
. : . : . : . : . : . :
JMFF012A22+ TGCCATAGATCATAGGAATCCCTAGGCGGGTTGAAAGTGCCCCCTTCTGAATCTCGTTCA
JMFF024C02+ TGCCATAGATCATAGGAATCCCTAGGCGGGTTGAAAGTGCCCCCTTCTGAATCTCGTTCA
JMFF033I20+ TGCCATAGATCATAGGAATCCCTAGGCGGGTTGAAAGTGCCCCCTTCNGAATCTCGTTCA
JMFF009J09+ TGCCATAGATCATAGGAATCCCTAGGCGGGTTGAAAGTGCCCCCTTCTGAATCTCGTTCA
____________________________________________________________
consensus TGCCATAGATCATAGGAATCCCTAGGCGGGTTGAAAGTGCCCCCTTCTGAATCTCGTTCA
. : . : . : . : . : . :
JMFF012A22+ CCATATTAACCCAATCTTGAACAGAGGCCTT-AGGTGCAGGCACACTTCCTCCACCACTC
JMFF024C02+ CCATATTAACCCAATCTTGAACAGAGGCCTT-AGGTGCAGGCACACTTCCTCCACCACTC
JMFF033I20+ CCATATTAACCCAATCTTGAACAGAGGCCTTNAGGTGCAGGCACACTTCCTCCACCACTC
JMFF009J09+ CCATATTAACCCAATCTTGAACAGAGGCCTT-AGGTGCAGGCACACTTCCTCCACCACTC
____________________________________________________________
consensus CCATATTAACCCAATCTTGAACAGAGGCCTT-AGGTGCAGGCACACTTCCTCCACCACTC
. : . : . : . : . : . :
JMFF012A22+ AATACACTCCCTATGAAGTACTGCTTCATAACATCAGCACTGGCAACTTTCCTCTCAATC
JMFF024C02+ AATACACTCCCTATGAAGTACTGCTTCATAACATCAGCACTGGCAACTTTCCTCTCAATC
JMFF033I20+ AATACACTCCCTATGAAGTACTGCTTCATAACATCAGCACTGGCAACTTTCCTCTCAATC
JMFF009J09+ AATACACTCCCTATGAAGTACTGCTTCATAACATCAGCACTGGCAACTTTCCTCTCAATC
____________________________________________________________
consensus AATACACTCCCTATGAAGTACTGCTTCATAACATCAGCACTGGCAACTTTCCTCTCAATC
. : . : . : . : . : . :
JMFF012A22+ TGAGTCATCTGCCCAATCTTCTCCTCAAGACTCATCCTCTTCATTAAATCCTTGATTCTA
JMFF024C02+ TGAGTCATCTGCCCAATCTTCTCCTCAAGACTCATCCTCTTCATTAAATCCTTGATTCTA
JMFF033I20+ TGAGTCATCTGCCCAATCTTCTCCTCAAGACTCATCCTCTTCATTAAATCCTTGATTCTA
JMFF009J09+ TGAGTCATCTGCCCAATCTTCTCCTCAAGACTCATCCTCTTCATTAAATCCTTGATTCTA
____________________________________________________________
consensus TGAGTCATCTGCCCAATCTTCTCCTCAAGACTCATCCTCTTCATTAAATCCTTGATTCTA
. : . : . : . : . : . :
JMFF012A22+ GCTCCCAGTGGCTGCTTGGGATCCTTGTACTTCAAGTACTCACCTTCTGCCATGGCTGCC
JMFF024C02+ GCTCCCAGTGGCTGCTTGGGATCCTTGTACTTCAAGTACTCACCTTCTGCCATGGCTGCC
JMFF033I20+ GCTCCCAGTGGCTGCTTGGGATCCTTGTACTTCAAGTACTCACCTTCTGCCATGGCTGCC
JMFF009J09+ GCTCCCAGTGGCTGCTTGGGATCCTTGTACTTCAAGTACTCACCTTCTGCCATGGCTGCC
____________________________________________________________
consensus GCTCCCAGTGGCTGCTTGGGATCCTTGTACTTCAAGTACTCACCTTCTGCCATGGCTGCC
. : . : . : . : . : . :
JMFF012A22+ ATTAAGCACAAAACCAGCAGCCCAAAACCCACCAAGGGTCTTGCAGATCTCCCCATTTTA
JMFF024C02+ ATTAAGCACAAAACCAGCAGCCCAAAACCCACCAAGGGTCTTGCAGATCTCCCCATTTTA
JMFF033I20+ ATTAAGCACAAAACCAGCAGCCCAAAACCCACCAAGGGTCTTGCAGATCTCCCCATTTTA
JMFF009J09+ ATTAAGCACAAAACCAGCAGCCCAAAACCCACCAAGGGTCTTGCAGATCTCCCCATTTTA
____________________________________________________________
consensus ATTAAGCACAAAACCAGCAGCCCAAAACCCACCAAGGGTCTTGCAGATCTCCCCATTTTA
. : . : . : . : . : . :
JMFF012A22+ GCCACCCCCATTCAACTTCTGCTCTCCTTCTCCCCCAACTGCCTGTAGACTATAGAGGAA
JMFF024C02+ GCCACCCCCATTCAACTTCTGCTCTCCTTCTCCCCCAACTGCCTGTAGACTATAGAGGAA
JMFF033I20+ GCCACCCCCATTCAACTTCTGCTCTCCTTCTCCCCCAACTGCCTGTAGACTATAGAGGAA
JMFF009J09+ GCCACCCCCATTCAACTTCTGCTCTCCTTCTCCCCCAACTGCCTGTAGACTATAGAGGAA
____________________________________________________________
consensus GCCACCCCCATTCAACTTCTGCTCTCCTTCTCCCCCAACTGCCTGTAGACTATAGAGGAA
. : . : . : . : . : . :
JMFF012A22+ GCTCAAATCTTGGAGGGGATATCTGTCAATGGCAATGATACACCAAACAAATTGAGT
JMFF024C02+ GCTCAAATCTTGGAGGGGATATCTGTCAATGGCAATGATACACCAAACAAATTGAGT
JMFF033I20+ GCTCAAATCTTGGAGGGGATATCTGTCAATGGCAATGATACACCAAA
JMFF009J09+ GCTCAAATCTTGGAGGGGATATCTGTCAATGGCAATGATACACCAAACAAATTGAGTGAT
____________________________________________________________
consensus GCTCAAATCTTGGAGGGGATATCTGTCAATGGCAATGATACACCAAACAAATTGAGTGAT