Contig 003093:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009I23Sequence523003093 (3)ref|XP_009766473.1|8e-64PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1 [Nicotiana sy715010384 (4)gb|EYU23127.1|8e-68hypothetical protein MIMGU_mgv1a006915mg [Erythranthe guttata]
JMFF016H24Sequence527003093 (3)ref|XP_006351472.1|4e-71PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Solanum748010384 (4)gb|EYU23127.1|2e-74hypothetical protein MIMGU_mgv1a006915mg [Erythranthe guttata]
JMFS076D10Sequence641003093 (3)ref|XP_004236328.1|2e-100PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1 [Solanum lyco

Alignment

This contig is upended


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JMFS076D10+                                                                    GAA
                      ____________________________________________________________
consensus                                                                      GAA
 
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JMFS076D10+           ATGACCCAGCAATATCTAGAACCTTTGTGTTCTTATATAGGTCAGAAGAAGTTAGAGCCT
                      ____________________________________________________________
consensus             ATGACCCAGCAATATCTAGAACCTTTGTGTTCTTATATAGGTCAGAAGAAGTTAGAGCCT
 
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JMFS076D10+           CAAAATAGTTTCCAGAAGTTGCTGTTGGAGACTCAGGGTGTAAACTTCTGAATTTGGGAG
                      ____________________________________________________________
consensus             CAAAATAGTTTCCAGAAGTTGCTGTTGGAGACTCAGGGTGTAAACTTCTGAATTTGGGAG
 
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JMFS076D10+           AACAAATGCCATTAGCAGCTGCTGCAACAGCAGGAGGGAGATCCGATTCAGCCATTGCTT
JMFF016H24+           AACAAATGCCATTAGCAGCTGCTGCAACAGCAGGAGGGAGATCCGATTCAGCCATTGCTT
                      ____________________________________________________________
consensus             AACAAATGCCATTAGCAGCTGCTGCAACAGCAGGAGGGAGATCCGATTCAGCCATTGCTT
 
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JMFS076D10+           CATCCCATTTGGTAAATCCTTCAATCTTTTCTGACTGATGCAGAATCCAGACCACAATTC
JMFF016H24+           CATCCCATTTGGTAAATCCTTCAATCTTTTCTGACTGATGCAGAATCCAGACCACAATTC
JMFF009I23+                            CCTTCAATCTTTTCTGACTGATGCAGAATCCAGACCACAATTC
                      ____________________________________________________________
consensus             CATCCCATTTGGTAAATCCTTCAATCTTTTCTGACTGATGCAGAATCCAGACCACAATTC
 
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JMFS076D10+           CGGCGTACTCCACAATGCCGATGTATCTATCAATCCAGCTAGCATCTTCAGGGGCATCAA
JMFF016H24+           CGGCGTACTCCACAATGCCGATGTATCTATCAATCCAGCTAGCATCTTCAGGGGCATCAA
JMFF009I23+           CGGCGTACTCCACAATGCCGATGTATCTATCAATCCAGCTAGCATCTTCAGGGGCATCAA
                      ____________________________________________________________
consensus             CGGCGTACTCCACAATGCCGATGTATCTATCAATCCAGCTAGCATCTTCAGGGGCATCAA
 
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JMFS076D10+           CATCCACGACAGGCGCGCTTAACAGTTTATTCTGGGATAGTAATTTAACAGCTTCACCCA
JMFF016H24+           CATCCACGACAGGCGCGCTTAACAGTTTATTCTGGGATAGTAATTTAACAGCTTCACCCA
JMFF009I23+           CATCCACGACAGGCGCGCTTAACAGTTTATTCTGGGATAGTAATTTAACAGCTTCACCCA
                      ____________________________________________________________
consensus             CATCCACGACAGGCGCGCTTAACAGTTTATTCTGGGATAGTAATTTAACAGCTTCACCCA
 
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JMFS076D10+           AACTGGCATCCGATTTTATCTCAACCACTTGATTGGAAGCGGCGGGAGGGAAGTCGGAGA
JMFF016H24+           AACTGGCATCCGATTTTATCTCAACCACTTGATTGGAAGCGGCGGGAGGGAAGTCGGAGA
JMFF009I23+           AACTGGCATCCGATTTTATCTCAACCACTTGATTGGAAGCGGCGGGAGGGAAGTCGGAGA
                      ____________________________________________________________
consensus             AACTGGCATCCGATTTTATCTCAACCACTTGATTGGAAGCGGCGGGAGGGAAGTCGGAGA
 
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JMFS076D10+           CAGGGATGCTTTCAAAACAAGCATTGAGCTTCTCAGTAGGACTGAGCTGCGGCTCCTGAA
JMFF016H24+           CAGGGATGCTTTCAAAACAAGCATTGAGCTTCTCAGTAGGACTGAGCTGCGGCTCTTGAA
JMFF009I23+           CAGGGATGCTTTCAAAACAAGCATTGAGCTTCTCAGTAGGACTGAGCTGCGGCTCCTGAA
                      ____________________________________________________________
consensus             CAGGGATGCTTTCAAAACAAGCATTGAGCTTCTCAGTAGGACTGAGCTGCGGCTCCTGAA
 
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JMFS076D10+           CGTCCCATAGATCCTCCACCTGCAACCCCAATTTCGCCTCCGGGCTCCGGGGAGTCGACA
JMFF016H24+           CGTCCCATAGATCCTCCACCTGCAACCCCAATTTCGCCTCCGGGCTCCGGGGAGTCGACA
JMFF009I23+           CGTCCCATAGATCCTCCACCTGCAACCCCAATTTCGCCTCCGGGCTCCGGGGAGTCGACA
                      ____________________________________________________________
consensus             CGTCCCATAGATCCTCCACCTGCAACCCCAATTTCGCCTCCGGGCTCCGGGGAGTCGACA
 
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JMFS076D10+           CCTGACTCCCCTCCTCACTCTCCATCTCTCTCATCATCTGCATCTTGCCTCTCTTTCTCT
JMFF016H24+           CCTGACTCCCCTCCTCACTCTCCATCTCTCTCATCATCTGCATCTTGCCTCTCTTTCTCT
JMFF009I23+           CCTGACTCCCCTCCTCACTCTCCATCTCTCTCATCATCTGCATCTTGCCTCTCTTTCTCT
                      ____________________________________________________________
consensus             CCTGACTCCCCTCCTCACTCTCCATCTCTCTCATCATCTGCATCTTGCCTCTCTTTCTCT
 
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JMFS076D10+           TCCTCTCTCTCTCTCTCTAGCTGGTAACGAGAGATCAA                      
JMFF016H24+           TCCTCTCTCTCTCTCTCTAGCTGGTAACGAGAGATCAATCAATCACT             
JMFF009I23+           TCCTCTCTCTCTCTCTCTAGCTGGTAACGAGAGATCAATCAATCACTGGATATTTGTTGC
                      ____________________________________________________________
consensus             TCCTCTCTCTCTCTCTCTAGCTGGTAACGAGAGATCAATCAATCACTGGATATTTGTTGC
 
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JMFF009I23+           TTTTTCAGAAGGCGACACACTATTATTATTGCATCCACAATGATTCATTCAAGCTTCCAT
                      ____________________________________________________________
consensus             TTTTTCAGAAGGCGACACACTATTATTATTGCATCCACAATGATTCATTCAAGCTTCCAT