Contig 003090:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009C04Sequence530003090 (2)ref|XP_006345755.1|4e-31PREDICTED: uncharacterized protein LOC102600786 isoform X1 [Solanum tuberosum] 738002530 (2)gb|EYU45988.1|3e-61hypothetical protein MIMGU_mgv1a008242mg [Erythranthe guttata]
JMFF016N17Sequence522003090 (2)ref|XP_006345755.1|1e-32PREDICTED: uncharacterized protein LOC102600786 isoform X1 [Solanum tuberosum] 162002530 (2)

Alignment

This contig is upended


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JMFF016N17+                            CATTTCTGCTTTTTCTGAATCCTTCAAATACGAACCCCTTGCC
JMFF009C04+                    TTCTTGTACATTTCTGCTTTTTCTGAATCCTTCAAATACGAACCCCTTG-C
                      ____________________________________________________________
consensus                      TTCTTGTACATTTCTGCTTTTTCTGAATCCTTCAAATACGAACCCCTTGCC
 
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JMFF016N17+           CCCTGGCTCCATAACCTGCTTCATCATCAGGCCAATGTCTTGCATCCTCGCATCCCATCC
JMFF009C04+           CCCTGGCTCCATAACCTGCTTCATCATCAGGCCAATGTCTTGCATCCTCGCATCCCATCC
                      ____________________________________________________________
consensus             CCCTGGCTCCATAACCTGCTTCATCATCAGGCCAATGTCTTGCATCCTCGCATCCCATCC
 
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JMFF016N17+           ACCCACGAACGCCTTCGACTTGCGTGTCTCCTCCTCCAGCTGCCTCAGCGTGTCCATTTC
JMFF009C04+           ACCCACGAACGCCTTCGACTTGCGTGTCTCCTCCTCCAGCTGCCTCAGCGTGTCCATTTC
                      ____________________________________________________________
consensus             ACCCACGAACGCCTTCGACTTGCGTGTCTCCTCCTCCAGCTGCCTCAGCGTGTCCATTTC
 
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JMFF016N17+           CTCATCCGTCATCCGGGCCGACCCGAACCCGGATTTCGAGCGCCCAGAGTCGGACTGTGC
JMFF009C04+           CTCATCCGTCATCCGGGCCGACCCGAACCCGGATTTCGAGCGCCCAGAGTCGGACTGTGC
                      ____________________________________________________________
consensus             CTCATCCGTCATCCGGGCCGACCCGAACCCGGATTTCGAGCGCCCAGAGTCGGACTGTGC
 
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JMFF016N17+           TTGTTTCCCCACAACCTCCCCAT-CAAAATGCTCCTTCGTTAAGCCGACGGACCAGGATG
JMFF009C04+           TTGTTTCCCCACAACCTCCCCATCCAAAATGCTCCTTCGTTAAGCCGACGGACCAGGATG
                      ____________________________________________________________
consensus             TTGTTTCCCCACAACCTCCCCATCCAAAATGCTCCTTCGTTAAGCCGACGGACCAGGATG
 
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JMFF016N17+           ACCCGACGTCCCAACCCAGGCCATCACCGGACTTCGAATCTCCAGAGTCCGGTCCTTTAT
JMFF009C04+           ACCCGACGTCCCAACCCAGGCCATCACCGGACTTCGAATCTCCAGAGTCCGGTCCTTTAT
                      ____________________________________________________________
consensus             ACCCGACGTCCCAACCCAGGCCATCACCGGACTTCGAATCTCCAGAGTCCGGTCCTTTAT
 
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JMFF016N17+           CGGGTCCGGATGAGAATGGCCTGTCCGACGAGAAAAGGCCGAGGCTCTTCAGTGGCGCTG
JMFF009C04+           CGGGTCCGGATGAGAATGGCCTGTCCGACGAGAAAAGGCCGAGGCTCTTCAGTGGCGCTG
                      ____________________________________________________________
consensus             CGGGTCCGGATGAGAATGGCCTGTCCGACGAGAAAAGGCCGAGGCTCTTCAGTGGCGCTG
 
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JMFF016N17+           AAAGATGCTTACCGGCAGGGCTTGCAGAGAGACGAGTAAGTAGCAGTCGTTGAAGACCGC
JMFF009C04+           AAAGATGCTTACCGGCAGGGCTTGCAGAGAGACGAGTAAGTAGCAGTCGTTGAAGACCGC
                      ____________________________________________________________
consensus             AAAGATGCTTACCGGCAGGGCTTGCAGAGAGACGAGTAAGTAGCAGTCGTTGAAGACCGC
 
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JMFF016N17+           GCATCGTGAGTTCTAGAGAGCCGTACGCTGTGAAACTCGGTCGGTTCAGCCGGAGATGGT
JMFF009C04+           GCATCGTGAGTTCTAGAGAGCCGTACGCTGTGAAACTCGGTCGGTTCAGCCGGAGATGGT
                      ____________________________________________________________
consensus             GCATCGTGAGTTCTAGAGAGCCGTACGCTGTGAAACTCGGTCGGTTCAGCCGGAGATGGT