Contig 003087:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005P13Sequence476003087 (6)ref|XP_009589888.1|3e-33PREDICTED: uncharacterized zinc finger protein At4g06634 [Nicotiana tomentosifo744005502 (6)gb|KJB16120.1|2e-53hypothetical protein B456_002G214700 [Gossypium raimondii]
JMFF008M23Sequence573003087 (6)gb|EYU26504.1|3e-63hypothetical protein MIMGU_mgv1a007778mg [Erythranthe guttata]735005502 (6)gb|KJB16120.1|1e-40hypothetical protein B456_002G214700 [Gossypium raimondii]
JMFF011H02Sequence476003087 (6)ref|XP_009589888.1|3e-33PREDICTED: uncharacterized zinc finger protein At4g06634 [Nicotiana tomentosifo746005502 (6)gb|KJB16119.1|7e-56hypothetical protein B456_002G214700 [Gossypium raimondii]
JMFF043A01Sequence639003087 (6)gb|EYU26504.1|2e-78hypothetical protein MIMGU_mgv1a007778mg [Erythranthe guttata]542005502 (6)ref|XP_006387776.1|3e-23hypothetical protein POPTR_0590s00200g [Populus trichocarpa] gb|ERP46690.1| hypo
JMFF043A05Sequence636003087 (6)gb|EYU26504.1|5e-75hypothetical protein MIMGU_mgv1a007778mg [Erythranthe guttata]541005502 (6)ref|XP_006387776.1|9e-24hypothetical protein POPTR_0590s00200g [Populus trichocarpa] gb|ERP46690.1| hypo
JMSF007L18Sequence378003087 (6)ref|XP_006350548.1|2e-25PREDICTED: uncharacterized zinc finger protein At4g06634-like [Solanum tuberosu776005502 (6)gb|KJB16120.1|1e-67hypothetical protein B456_002G214700 [Gossypium raimondii]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF043A01+ CAGGTGAAATCCAGCGAGAATGCCTTGCCACAGCCCTCC
JMFF043A05+ GTGAAATCCAGCGAGAATGCCTGCCANCAGCCCTCC
                      ____________________________________________________________
consensus CAGGTGAAATCCAGCGAGAATGCCTTGCCACAGCCCTCC
 
. : . : . : . : . : . :
JMFF043A01+ ACTGGACATACAAAAGCCCTCTCCCCTGTATGAATAAGAAAGTGCCGCTTCAGCTTTGAA
JMFF043A05+ ACTGGACATACAAAAGCCCTCTCCCCTGTATGAATAAGAAAGTGCCGCTTCAGCTTTGAA
JMFF008M23+ GTATGAATAAGAAAGTGCCGCTTCAGCTTTGAA
                      ____________________________________________________________
consensus ACTGGACATACAAAAGCCCTCTCCCCTGTATGAATAAGAAAGTGCCGCTTCAGCTTTGAA
 
. : . : . : . : . : . :
JMFF043A01+ CTATCCAAAAATTTCTTTCCACAATTCTCATAGTGACAGATATATTGTCTCTCTCCATGG
JMFF043A05+ CTATCCAAAAATTTCTTTCCACAATTCTCATAGTGACAGATATATTGTCTCTCTCCATGG
JMFF005P13+ TCATAGTGACAGATATATTGTCTCTCTCCATGG
JMFF011H02+ TCATAGTGACAGATATATTGTCTCTCTCCATGG
JMFF008M23+ CTATCCAAAAATTTCTTTCCACAATTCTCATAGTGACAGATATATTGTCTCTCTCCATGG
                      ____________________________________________________________
consensus CTATCCAAAAATTTCTTTCCACAATTCTCATAGTGACAGATATATTGTCTCTCTCCATGG
 
. : . : . : . : . : . :
JMFF043A01+ ATGTGAGAATGCTTCCTCAAAGCTCCAGCATCAATAAATGTCTTTCCACAGCCTTCATAA
JMFF043A05+ ATGTGAGAATGCTTCCTCAAAGCTCCAGCATCAATAAATGTCTTTCCACAGCCTTCATAA
JMFF005P13+ ATGTGAGAATGCTTCCTCAAAGCTCCAGCATCAATAAATGTCTTTCCACAGCCTTCATAA
JMFF011H02+ ATGTGAGAATGCTTCCTCAAAGCTCCAGCATCAATAAATGTCTTTCCACAGCCTTCATAA
JMSF007L18+ CATAA
JMFF008M23+ ATGTGAGAATGCTTCCTCAAAGCTCCAGCATCAATAAATGTCTTTCCACAGCCTTCATAA
                      ____________________________________________________________
consensus ATGTGAGAATGCTTCCTCAAAGCTCCAGCATCAATAAATGTCTTTCCACAGCCTTCATAA
 
. : . : . : . : . : . :
JMFF043A01+ CTGCAGAGGAAGAGAACTTCAGTAGCTGGCTCTGGCTCAGCTTCTGGAATTTCTGGCTCT
JMFF043A05+ CTGCAGAGGAAGAGAACTTCAGTAGCTGGCTCTGGCTCAGCTTCTGGAATTTCTGGCTCT
JMFF005P13+ CTGCAGAGGA--AAAACTTCAGTAGCTGGCTCTGGCTCAGCTTCTGGAATTTCTGGCTCT
JMFF011H02+ CTGCAGAGGA--AAAACTTCAGTAGCTGGCTCTGGCTCAGCTTCTGGAATTTCTGGCTCT
JMSF007L18+ CTGCAGAGGAAGAGAACTTCAGTAGCTGGCTCTGGCTCAGCTTCTGGAATTTCTGGCTCT
JMFF008M23+ CTGCAGAGGAAGAGAACTTCAGTAGCTGGCTCTGGCTCAGCTTCTGGAATTTCTGGCTCT
                      ____________________________________________________________
consensus CTGCAGAGGAAGAGAACTTCAGTAGCTGGCTCTGGCTCAGCTTCTGGAATTTCTGGCTCT
 
. : . : . : . : . : . :
JMFF043A01+ ATCGGCTTCTCCTTTAAAGCATTCAATGTGGCCTCATTAACCCATTTTAAAAGCAAGCAC
JMFF043A05+ ATCGGCTTCTCCTTTAAAGCATTCAATGTGGCCTCATTAACCCATTTTAAAAGCAAGCAC
JMFF005P13+ ATCGGCTTCTCCTTTAAAGCATTCAATGTGGCCTCATTAACCCATTTTAAAAGCAAGCAC
JMFF011H02+ ATCGGCTTCTCCTTTAAAGCATTCAATGTGGCCTCATTAACCCATTTTAAAAGCAAGCAC
JMSF007L18+ ATCGGCTTCTCCTTTAAAGCATTCAATGTGGCCTCATTAACCCATTTTAAAAGCAAGCAC
JMFF008M23+ ATCGGCTTCTCCTTTAAAGCATTCAATGTGGCCTCATTAACCCATTTTAAAAGCAAGCAC
                      ____________________________________________________________
consensus ATCGGCTTCTCCTTTAAAGCATTCAATGTGGCCTCATTAACCCATTTTAAAAGCAAGCAC
 
. : . : . : . : . : . :
JMFF043A01+ TTCCCACCAGTTGCTACAACATCTTGTGGCACCCATTCCTTGAACCATTTGGTGGCGGGA
JMFF043A05+ TTCCCACCAGTTGCTACAACATCTTGTGGCACCCATTCCTTGAACCATTTGGTGGCGGGA
JMFF005P13+ TTCCCACCAGTTGCTACAACATCTTGTGGCACCCATTCCTTGAACCATTTGGTGGCGGGA
JMFF011H02+ TTCCCACCAGTTGCTACAACATCTTGTGGCACCCATTCCTTGAACCATTTGGTGGCGGGA
JMSF007L18+ TTCCCACCAGTTGCTACAACATCTTGTGGCACCCATTCCTTGAACCATTTGGTGGCGGGA
JMFF008M23+ TTCCCACCAGTTGCTACAACATCTTGTGGCACCCATTCCTTGAACCATTTGGTGGCGGGA
                      ____________________________________________________________
consensus TTCCCACCAGTTGCTACAACATCTTGTGGCACCCATTCCTTGAACCATTTGGTGGCGGGA
 
. : . : . : . : . : . :
JMFF043A01+ GCTCTGGACTTTGCGATGGGGCGCCGGTCGAAAAGGTTGTGAAACGTCTGAGCCTCCATC
JMFF043A05+ GCTCTGGACTTTGCGATGGGGCGCCGGTCGAAAAGGTTGTGAAACGTCTGAGCCTCCATC
JMFF005P13+ GCTCTGGACTTTGCGATGGGGCGCCGGTCGAAAAGGTTGTGAAACGTCTGAGCCTCCATC
JMFF011H02+ GCTCTGGACTTTGCGATGGGGCGCCGGTCGAAAAGGTTGTGAAACGTCTGAGCCTCCATC
JMSF007L18+ GCTCTGGACTTTGCGATGGGGCGCCGGTCGAAAAGGTTGTGAAACGTCTGAGCCTCCATC
JMFF008M23+ GCTCTGGACTTTGCGATGGGGCGCCGGTCGAAAAGGTTGTGAAACGTCTGAGCCTCCATC
                      ____________________________________________________________
consensus GCTCTGGACTTTGCGATGGGGCGCCGGTCGAAAAGGTTGTGAAACGTCTGAGCCTCCATC
 
. : . : . : . : . : . :
JMFF043A01+ TAATCAGACACCGGAGCCGGTGGCCGATCGATTAACTCTTCTACGCTATATATATCGTTG
JMFF043A05+ TAATCAGACACCGGAGCCGGTGGCCGATCGATTAACTCTTCTACGCTATATATATCGTTG
JMFF005P13+ TAATCAGACACCGGAGCCGGTGGCCGATCGATTAACTCTTCTACGCTATATATATCGTTG
JMFF011H02+ TAATCAGACACCGGAGCCGGTGGCCGATCGATTAACTCTTCTACGCTATATATATCGTTG
JMSF007L18+ TAATCAGACACCGGAGCCGGTGGCCGATCGATTAACTCTTCTACGCTATATATATCGTTG
JMFF008M23+ TAATCAGACACCGGAGCCGGTGGCCGATCGATTAACTCTTCTACGCTATATATATCGTTG
                      ____________________________________________________________
consensus TAATCAGACACCGGAGCCGGTGGCCGATCGATTAACTCTTCTACGCTATATATATCGTTG
 
. : . : . : . : . : . :
JMFF043A01+ CGAATTAGGGTTAGGAGCTTTAGATTTCGATTTTCAGGATCACGAGGTCGTGTTGTACTG
JMFF043A05+ CGAATTAGGGTTAGGAGCTTTAGATTTCGATTTTCAGGATCACGAGGTCGTGTTGTACTG
JMFF005P13+ CGAATTAGGGTTAGGAGCTTTAGATTTCGATTTTCAGGATCACGAGGTCGTGTTGTACTG
JMFF011H02+ CGAATTAGGGTTAGGAGCTTTAGATTTCGATTTTCAGGATCACGAGGTCGTGTTGTACTG
JMSF007L18+ CGAATTAGGGTTAGGAGCTTTAGATTTCGATTTTCAGGATCACGAGGTCGTGTTGTACTG
JMFF008M23+ CGAATTAGGGTTAGGAGCTTTAGATTTCGATTTTCAGGATCACGAGGTCGTGTTGTACTG
                      ____________________________________________________________
consensus CGAATTAGGGTTAGGAGCTTTAGATTTCGATTTTCAGGATCACGAGGTCGTGTTGTACTG
 
. : . : . : . : . : . :
JMFF043A01+ GTGAAATTCGGAACTTCGAAGTTTGTGAGTCTGCTCTGCCATTGTAGTTTCTTCCGGACC
JMFF043A05+ GTGAAATTCGGAACTTCGAAGTTTGTGAGTCTGCTCTGCCATTGTAGTTTCTTCCGGACC
JMFF005P13+ GTGAAATTCGGAACT
JMFF011H02+ GTGAAATTCGGAACT
JMSF007L18+ GTGAAATTCGGA
JMFF008M23+ GTGAAATTCGGAACTTCGAAGTTTGTGAGTCTGCTCTGCCATTGTAGTTTCTTCCGGACC
                      ____________________________________________________________
consensus GTGAAATTCGGAACTTCGAAGTTTGTGAGTCTGCTCTGCCATTGTAGTTTCTTCCGGACC