Contig 003086:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS054B06+                                                        TGGTGGTGAGGGAAC
                      ____________________________________________________________
consensus                                                          TGGTGGTGAGGGAAC
 
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JMFS054B06+           AGTGCTCCCATCCATTGTCACAACTCCTTGAAGGGGTGCCATGTATCCCATTGGAGGGAG
                      ____________________________________________________________
consensus             AGTGCTCCCATCCATTGTCACAACTCCTTGAAGGGGTGCCATGTATCCCATTGGAGGGAG
 
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JMFS054B06+           CCCAGCAGCAGCAGCACCAGGCCAGCCAGCCAACGACATCGGGGGCAAAGGCAAGGAACT
                      ____________________________________________________________
consensus             CCCAGCAGCAGCAGCACCAGGCCAGCCAGCCAACGACATCGGGGGCAAAGGCAAGGAACT
 
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JMFS054B06+           CGATTGATTAGCTTTCTCTGGGTGTTCTTCATTGTTACTTTTAAGCAATGGGTGGTGTTG
                      ____________________________________________________________
consensus             CGATTGATTAGCTTTCTCTGGGTGTTCTTCATTGTTACTTTTAAGCAATGGGTGGTGTTG
 
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JMFS054B06+           ATGAAGTTTATTATTATCCCCCCTTTGCAGCTTTTCTAAATCAAGCTGAACACCAATATC
                      ____________________________________________________________
consensus             ATGAAGTTTATTATTATCCCCCCTTTGCAGCTTTTCTAAATCAAGCTGAACACCAATATC
 
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JMFS054B06+           CTTGCCCTTACTACTTTCAGTTCTTTTCTGGGGTGGTGCTTCTGCTGCTTCTACAGCTTT
                      ____________________________________________________________
consensus             CTTGCCCTTACTACTTTCAGTTCTTTTCTGGGGTGGTGCTTCTGCTGCTTCTACAGCTTT
 
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JMFS054B06+           CATCTTTTTCTCTTCTTCCACAGTCTTTTCTTCCAATTTCTTCTCATCATCCTCATTATG
                      ____________________________________________________________
consensus             CATCTTTTTCTCTTCTTCCACAGTCTTTTCTTCCAATTTCTTCTCATCATCCTCATTATG
 
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JMFS054B06+           CTTCACAGTAGCCCTTTCTGGCAAAGACTCAGATGCAATTGTCTTGATATCCATTGTAGC
                      ____________________________________________________________
consensus             CTTCACAGTAGCCCTTTCTGGCAAAGACTCAGATGCAATTGTCTTGATATCCATTGTAGC
 
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JMFS054B06+           AGAGCCTTCCCTCTCCGGTGAAGATCTCGACAGTGGAGGCGGTGGAGCCATCAGATCTAT
                      ____________________________________________________________
consensus             AGAGCCTTCCCTCTCCGGTGAAGATCTCGACAGTGGAGGCGGTGGAGCCATCAGATCTAT
 
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JMFS054B06+           CTGGATCTTCTTCTCCTCTCTCTGCCCTTCTTCCACCTCTGACACAGTTGAGGGTTTGGT
JMFS032F12+                   TCTTCTCCTCTCTCTGCCCTTCTTCCACCTCTGACACAGTTGAGGGTTTGGT
                      ____________________________________________________________
consensus             CTGGATCTTCTTCTCCTCTCTCTGCCCTTCTTCCACCTCTGACACAGTTGAGGGTTTGGT
 
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JMFS054B06+           GGTTACAGAATCAGCAGCCATCGCTTTCGAGTCCTCAGCAGAAGCAGAAGGAGGTGATTC
JMFS032F12+           GGTTACAGAATCAGCAGCCATCGCTTTCGAGTCCTCAGCAGAAGCAGAAGGAGGTGATTC
                      ____________________________________________________________
consensus             GGTTACAGAATCAGCAGCCATCGCTTTCGAGTCCTCAGCAGAAGCAGAAGGAGGTGATTC
 
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JMFS054B06+           CTTCTTTGGGGAGCTCACCA                                        
JMFS032F12+           CTTCTTTGGGGAGCTCACCACCACCTCCTCCTCCTTTCCGACCAAATCTCCACTTTCCGG
                      ____________________________________________________________
consensus             CTTCTTTGGGGAGCTCACCACCACCTCCTCCTCCTTTCCGACCAAATCTCCACTTTCCGG
 
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JMFS032F12+           CACTTGCTCCGTCGCCGGCGGCTTGATTTCCGATTCCACCTTCATCGGCTCCGCCGTCGG
                      ____________________________________________________________
consensus             CACTTGCTCCGTCGCCGGCGGCTTGATTTCCGATTCCACCTTCATCGGCTCCGCCGTCGG
 
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JMFS032F12+           ATCTGATTGTGAATTGATTGAACTGCCCAAACCATATAACAAAGAGCCACCACCATTTTG
                      ____________________________________________________________
consensus             ATCTGATTGTGAATTGATTGAACTGCCCAAACCATATAACAAAGAGCCACCACCATTTTG
 
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JMFS032F12+           AACTGGTGTTTTCTCGAAATTTGGGGAAGAAGAAACCTCCGTCTTCATCGTCTGATCCAT
                      ____________________________________________________________
consensus             AACTGGTGTTTTCTCGAAATTTGGGGAAGAAGAAACCTCCGTCTTCATCGTCTGATCCAT
 
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JMFS032F12+           CTCTGCTTTAGCAGAGGCCGATGATGGGCTGCTCCGAACACTAGCGCTGCCCTGATTCTC
                      ____________________________________________________________
consensus             CTCTGCTTTAGCAGAGGCCGATGATGGGCTGCTCCGAACACTAGCGCTGCCCTGATTCTC
 
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JMFS032F12+           CGAAACCTGCCTTGGTCTCTTCCTCTTCGGAGCAACAGCAGAAAAGGGAGCTGCCGACGA
JMFF008I14+                                                       AGGGAGCTGCTGACGA
                      ____________________________________________________________
consensus             CGAAACCTGCCTTGGTCTCTTCCTCTTCGGAGCAACAGCAGAAAAGGGAGCTGCTGACGA
 
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JMFS032F12+           GGAGTTCGGCACCGAAGGCAAAATCGCCGGCGACGGAGAGCCGGAAACCGGCGATGAGAC
JMFF008I14+           GGAGTTCAGCACAGAAGGCAAAATCGCCGGCGACGGAGAGCCCGGAACCAACGATGAGAC
                      ____________________________________________________________
consensus             GGAGTTCGGCACCGAAGGCAAAATCGCCGGCGACGGAGAGCCGGGAACCGGCGATGAGAC
 
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JMFS032F12+           ACGGGATTTAGTATCGCCACAGGATCTGTTGT                            
JMFF008I14+           ACATGATTTAGTATCGCCACAAGATCTGTTGTTTACTTCTCTGGTATCGTTCGATGCAAT
                      ____________________________________________________________
consensus             ACGTGATTTAGTATCGCCACAGGATCTGTTGTTTACTTCTCTGGTATCGTTCGATGCAAT
 
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JMFF008I14+           TTCTTTCTTCAAAAGAGCTTGCGACTAATCATCAACCCATACAAAACCTCCGCAATCTCA
                      ____________________________________________________________
consensus             TTCTTTCTTCAAAAGAGCTTGCGACTAATCATCAACCCATACAAAACCTCCGCAATCTCA
 
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JMFF008I14+           ATCTCCAGCTCCTTAGGGTTGTTGGAAGATGTCGATTTGGACGACGATTTCGGCGGCGGT
                      ____________________________________________________________
consensus             ATCTCCAGCTCCTTAGGGTTGTTGGAAGATGTCGATTTGGACGACGATTTCGGCGGCGGT
 
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JMFF008I14+           CTCTCCTTCGACCCATTAGCCTTCTACATCAACAAAAACACTTGTGTCACTCAAAAAACA
                      ____________________________________________________________
consensus             CTCTCCTTCGACCCATTAGCCTTCTACATCAACAAAAACACTTGTGTCACTCAAAAAACA
 
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JMFF008I14+           CTCACAATTCCGAGAAGATAAAGCAGAAAATTGAAGGACTAACAACCAATACAAAGAACC
                      ____________________________________________________________
consensus             CTCACAATTCCGAGAAGATAAAGCAGAAAATTGAAGGACTAACAACCAATACAAAGAACC
 
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JMFF008I14+           CATAATAAATGCATTTCCCAGAACTCCATCGCCGACGGAGAAAGAGCGTGCGAGGGACAT
                      ____________________________________________________________
consensus             CATAATAAATGCATTTCCCAGAACTCCATCGCCGACGGAGAAAGAGCGTGCGAGGGACAT