Contig 003085:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008G14Sequence466003085 (5)ref|XP_009606658.1|9e-09PREDICTED: uncharacterized protein LOC104100978 isoform X1 [Nicotiana tomentosi666001103 (4)ref|XP_011071150.1|229PREDICTED: uncharacterized protein LOC105156648 [Sesamum indicum]
JMFF021E14Sequence340003085 (5)712001103 (4)ref|XP_011071150.1|220PREDICTED: uncharacterized protein LOC105156648 [Sesamum indicum]
JMFF030K20Sequence158003085 (5)
JMFF044L15Sequence645003085 (5)ref|XP_009606658.1|8e-59PREDICTED: uncharacterized protein LOC104100978 isoform X1 [Nicotiana tomentosi
JMFS056E11Sequence627003085 (5)ref|XP_009606658.1|3e-103PREDICTED: uncharacterized protein LOC104100978 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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JMFS056E11+                                   ATCGAACTTCTCCCGGTTTTTAGCGAAATGTAGGGG
                      ____________________________________________________________
consensus                                     ATCGAACTTCTCCCGGTTTTTAGCGAAATGTAGGGG
 
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JMFS056E11+           CTTTGGCAGTCCGGTGAAAGTCGAATTCGATTCGAGTAAAACAAACTCCGTCACATACGG
                      ____________________________________________________________
consensus             CTTTGGCAGTCCGGTGAAAGTCGAATTCGATTCGAGTAAAACAAACTCCGTCACATACGG
 
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JMFS056E11+           GTGCAGCTCCTTCCATCTTATCGTAAGAATGTCCACGTCGTTATTGAACAACACCGCATC
                      ____________________________________________________________
consensus             GTGCAGCTCCTTCCATCTTATCGTAAGAATGTCCACGTCGTTATTGAACAACACCGCATC
 
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JMFS056E11+           AAAGACACGCCTCGGGTACTCCCGGATTCCCCAGCCGTGAAGTTTGCAGAGATTCTCCAT
JMFF044L15+                                                  AAGTTTGCAGAGATTCTCCAT
                      ____________________________________________________________
consensus             AAAGACACGCCTCGGGTACTCCCGGATTCCCCAGCCGTGAAGTTTGCAGAGATTCTCCAT
 
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JMFS056E11+           AGGCACATCCTCGTGATAATAATGCGGGATTTCGTGGAAGGGCTTTGGCGGCTTTTCCCA
JMFF044L15+           AGGCACATCCTCGTGATAATAATGCGGGATTTCGTGGAAGGGCTTTGGCGGCTTTTCCCA
                      ____________________________________________________________
consensus             AGGCACATCCTCGTGATAATAATGCGGGATTTCGTGGAAGGGCTTTGGCGGCTTTTCCCA
 
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JMFS056E11+           TAACGGCCTCAGAAAATATGTTATTTTCTGCCCGTGGACATATATACCAAATAAACTAAT
JMFF044L15+           TAACGGCCTCAGAAAATATGTTATTTTCTGCCCGTGGACATATATACCAAATAAACTAAT
                      ____________________________________________________________
consensus             TAACGGCCTCAGAAAATATGTTATTTTCTGCCCGTGGACATATATACCAAATAAACTAAT
 
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JMFS056E11+           CGGTACCATAACGAAAAGGAAGATGTATGTTTTCAAGTCCAAGCCTCGCAGAATACACTT
JMFF044L15+           CGGTACCATAACGAAAAGGAAGATGTATGTTTTCAAGTCCAAGCCTCGCAGAATACACTT
                      ____________________________________________________________
consensus             CGGTACCATAACGAAAAGGAAGATGTATGTTTTCAAGTCCAAGCCTCGCAGAATACACTT
 
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JMFS056E11+           GATTCTTGACATGCTTAATCCTCGACCTGTATACTCACTACACAAATCGTCCTTCTTCTT
JMFF044L15+           GATTCTTGACATGCTTAATCCTCGACCTGTATACTCACTACACAAATCGTCCTTCTTCTT
JMFF008G14+                         TTAATCCTCGACCTGTATACTCACTACACAAATCGTCCTTCTTCTT
                      ____________________________________________________________
consensus             GATTCTTGACATGCTTAATCCTCGACCTGTATACTCACTACACAAATCGTCCTTCTTCTT
 
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JMFS056E11+           AGAGCAATACCCAGATCCCCCTTCTCCCACCATGTTTGCTTTCTCCCAAAATCTAGTAAT
JMFF021E14+                                                      TCCCAAAATCTAGTAAT
JMFF044L15+           AGAGCAATACCCAGATCCCCCTTCTCCCACCATGTTTGCTTTCTCCCAAAATCTAGTAAT
JMFF008G14+           AGAGCAATACCCAGATCCCCCTTCTCCCACCATGTTTGCTTTCTCCCAAAATCTAGTAAT
                      ____________________________________________________________
consensus             AGAGCAATACCCAGATCCCCCTTCTCCCACCATGTTTGCTTTCTCCCAAAATCTAGTAAT
 
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JMFS056E11+           ACTCCACATCTCAGTCTCTCTCTACTATGTAAACTCTCCCTCAATTTCACAGATCAAACC
JMFF021E14+           ACTCCACATCTCAGTCTCTCTCTACTATGTAAACTCTCCCTCAATTTCACAGATCAAACC
JMFF044L15+           ACTCCACATCTCAGTCTCTCTCTACTATGTAAACTCTCCCTCAATTTCACAGATCAAACC
JMFF008G14+           ACTCCACATCTCAGTCTCTCTNTACTATGTAAACTCTCCCTCAATTTCACAGATCAAACC
                      ____________________________________________________________
consensus             ACTCCACATCTCAGTCTCTCTCTACTATGTAAACTCTCCCTCAATTTCACAGATCAAACC
 
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JMFS056E11+           CAAATCGACCCACTGTCAGAATCGAAACCAAACCCGCAATTCAATAGTTGA         
JMFF021E14+           CAAATCGACCCACTGTCAGAATCGAAACCAAACCCGCAATTCAATAGTTGAGAGAACCGG
JMFF044L15+           CAAATCGACCCACTGTCAGAATCGAAACCAAACCCGCAATTCAATAGTTGAGAGAACCGG
JMFF008G14+           CAAATCGACCCACTGTCAGAATCGAAACCAAACCCGCAATTCAATAGTTGAGAGAACCGG
                      ____________________________________________________________
consensus             CAAATCGACCCACTGTCAGAATCGAAACCAAACCCGCAATTCAATAGTTGAGAGAACCGG
 
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JMFF021E14+           AAGAGTGGGCAAACCTCGGAACACACGAACGGCGCAGAACAAAAAATTATTCTTTAAATA
JMFF044L15+           AAGAGTGGGCAAACCTCGGAACACACGAACGGCGCAGAACAAAAAATTATTCTTTAAATA
JMFF030K20+                                                                  AAATA
JMFF008G14+           AAGAGTGGGCAAACCTCGGAACACACGAACGGCGCAGAACAAAAAATTATTCTTTAAATA
                      ____________________________________________________________
consensus             AAGAGTGGGCAAACCTCGGAACACACGAACGGCGCAGAACAAAAAATTATTCTTTAAATA
 
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JMFF021E14+           AGAAAAAATAAAAGAATAGATAACAAAAACGATGTTTATCGGACGGAGCCTCTCTGGTGA
JMFF044L15+           AGAAAAAATAAAAGAATAGATAACAAAAACGATGTTTATCGGACGGAGCCTCTCTGGTGA
JMFF030K20+           AGAAAAAATAAAAGAATAGATAACAAAAACGATGTTTATCGGACGGAGCCTCTCTGGTGA
JMFF008G14+           AGAAAAAATAAAAGAATAGATAACAAAAACGATGTTTATCGGACGGAGCCTCTCTGGTGA
                      ____________________________________________________________
consensus             AGAAAAAATAAAAGAATAGATAACAAAAACGATGTTTATCGGACGGAGCCTCTCTGGTGA
 
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JMFF021E14+           ACGGGTGGCAATCGTAAAGATTAAAGAAGAATCGAAGAATACAAGGAAGCCGTTGTGGTT
JMFF044L15+           ACGGGTGGCAATCGTAAAGATTAAAGAAGAATCGAAGAATACAAGGAAGCCGTTGTGGTT
JMFF030K20+           ACGGGTGGCAATCGTAAAGATTAAAGAAGAATCGAAGAATACAAGGAAGCCGTTGTGGTT
JMFF008G14+           ACGGGTGGCAATCGTAAAGATTAAAGAAGAATCGAAGAATACAAGGAAGCCGTTGTGGTT
                      ____________________________________________________________
consensus             ACGGGTGGCAATCGTAAAGATTAAAGAAGAATCGAAGAATACAAGGAAGCCGTTGTGGTT
 
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JMFF021E14+           TGTCGTCTATCTACCCCACCCAC                                     
JMFF044L15+           TGTCGTCTATCTACCCCACCCAC                                     
JMFF030K20+           TGTCGTCTATCTACCCCACCCACACACATCAAT                           
JMFF008G14+           TGTCGTCTATCTACCCCACCCACACACATCAATAGTTGTACCAAGTATTTATAAGTACTT
                      ____________________________________________________________
consensus             TGTCGTCTATCTACCCCACCCACACACATCAATAGTTGTACCAAGTATTTATAAGTACTT