Contig 003083:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016D01Sequence123003083 (8)
JMFF008B22Sequence618003083 (8)ref|XP_002266652.1|7e-74PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera]
JMFF025A17Sequence588003083 (8)ref|XP_002266652.1|2e-74PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera]819003083 (8)ref|XP_011468343.1|4e-65PREDICTED: tether containing UBX domain for GLUT4 [Fragaria vesca subsp. vesca]
JMSF036E09Sequence600003083 (8)ref|XP_002266652.1|2e-76PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera]719003083 (8)ref|XP_011468343.1|8e-70PREDICTED: tether containing UBX domain for GLUT4 [Fragaria vesca subsp. vesca]
JMSF049E21Sequence638003083 (8)ref|XP_002266652.1|2e-80PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera]723003083 (8)ref|XP_011468343.1|1e-67PREDICTED: tether containing UBX domain for GLUT4 [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF025A17- TTGTTGTGTAAATCGTTTG
                      ____________________________________________________________
consensus TTGTTGTGTAAATCGTTTG
 
. : . : . : . : . : . :
rJMFF025A17- TTTAGCTATCTAGTTGTATCCATCAGCCTAAGTAAAAAGGGAAATATAGTTTGGTGATAA
                      ____________________________________________________________
consensus TTTAGCTATCTAGTTGTATCCATCAGCCTAAGTAAAAAGGGAAATATAGTTTGGTGATAA
 
. : . : . : . : . : . :
JMCP016D01+ AAAATAAAAGATTACAA
rJMFF025A17- TAGGAATTAGCACAGATGACACAAACTGCAGAATCAATAACCTAAAATAAAAGATTACAA
                      ____________________________________________________________
consensus TAGGAATTAGCACAGATGACACAAACTGCAGAATCAATAACCTAAAATAAAAGATTACAA
 
. : . : . : . : . : . :
JMCP016D01+ GGTAGAAACCATATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
rJMFF025A17- GGTAGAAACCATATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
rJMSF036E09- ATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
rJMSF049E21- ATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
                      ____________________________________________________________
consensus GGTAGAAACCATATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
 
. : . : . : . : . : . :
JMCP016D01+ AAAATAAATTTGTTTGAACAaGCGAATGCTGCAGGCTGTAATGGAA
rJMFF025A17- AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
rJMSF036E09- AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
rJMSF049E21- AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
                      ____________________________________________________________
consensus AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
 
. : . : . : . : . : . :
rJMFF025A17- TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
rJMSF036E09- TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
rJMSF049E21- TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
                      ____________________________________________________________
consensus TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
 
. : . : . : . : . : . :
rJMFF025A17- CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
rJMSF036E09- CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
rJMSF049E21- CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
                      ____________________________________________________________
consensus CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
 
. : . : . : . : . : . :
rJMFF025A17- CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
rJMSF036E09- CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
rJMSF049E21- CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
                      ____________________________________________________________
consensus CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
 
. : . : . : . : . : . :
rJMFF025A17- CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
rJMSF036E09- CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
rJMSF049E21- CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
                      ____________________________________________________________
consensus CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
 
. : . : . : . : . : . :
rJMFF025A17- TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
rJMSF036E09- TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
rJMSF049E21- TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
JMSF036E09+ TTAGGTAGTTCCCGGGGGCAACATCATC
JMFF025A17+ CCGGGGGCAACATCATC
JMSF049E21+ TCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
JMFF008B22+ CCCGGGGGCAACATCATC
                      ____________________________________________________________
consensus TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
 
. : . : . : . : . : . :
rJMFF025A17- ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
rJMSF036E09- ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
rJMSF049E21- ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMSF036E09+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMFF025A17+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMSF049E21+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMFF008B22+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
                      ____________________________________________________________
consensus ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
 
. : . : . : . : . : . :
rJMFF025A17- AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
rJMSF036E09- AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
rJMSF049E21- AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMSF036E09+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMFF025A17+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMSF049E21+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMFF008B22+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
                      ____________________________________________________________
consensus AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
 
. : . : . : . : . : . :
rJMFF025A17- CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
rJMSF036E09- CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
rJMSF049E21- CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMSF036E09+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMFF025A17+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMSF049E21+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMFF008B22+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTATGA
                      ____________________________________________________________
consensus CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
 
. : . : . : . : . : . :
rJMFF025A17- ANGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGNCTT
rJMSF036E09- AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
rJMSF049E21- AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMSF036E09+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMFF025A17+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMSF049E21+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMFF008B22+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
                      ____________________________________________________________
consensus AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
 
. : . : . : . : . : . :
rJMFF025A17- AGTTATCTTTGATCTACGTG
rJMSF036E09- AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGANTTTCTTTGTCTTCAAATA
rJMSF049E21- AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGANTTTCTTTGNCTTCAAATA
JMSF036E09+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
JMFF025A17+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
JMSF049E21+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
JMFF008B22+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
                      ____________________________________________________________
consensus AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
 
. : . : . : . : . : . :
rJMSF036E09- CTTATCTTCCT
rJMSF049E21- CTTATCTTCCTT
JMSF036E09+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
JMFF025A17+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
JMSF049E21+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
JMFF008B22+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
                      ____________________________________________________________
consensus CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
 
. : . : . : . : . : . :
JMSF036E09+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
JMFF025A17+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
JMSF049E21+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
JMFF008B22+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
                      ____________________________________________________________
consensus GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
 
. : . : . : . : . : . :
JMSF036E09+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
JMFF025A17+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
JMSF049E21+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
JMFF008B22+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
                      ____________________________________________________________
consensus AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
 
. : . : . : . : . : . :
JMSF036E09+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
JMFF025A17+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
JMSF049E21+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
JMFF008B22+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
                      ____________________________________________________________
consensus TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
 
. : . : . : . : . : . :
JMSF036E09+ AACTATCATCACCGGATACAAGCAATCGTCC
JMFF025A17+ AACTATCATCACCGGATACAAGCAATGGTCC
JMSF049E21+ AACTATCATCACCGGATACAAGCAATCGTCC
JMFF008B22+ AACTATCATCACCGGATACAAGCAATCGTCCGAATTTCAAATTTTCCTTTTTTCTCATGA
                      ____________________________________________________________
consensus AACTATCATCACCGGATACAAGCAATCGTCCGAATTTCAAATTTTCCTTTTTTCTCATGA