| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP016D01 | Sequence | 123 | 003083 (8) | ||||||||
| JMFF008B22 | Sequence | 618 | 003083 (8) | ref|XP_002266652.1| | 7e-74 | PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera] | |||||
| JMFF025A17 | Sequence | 588 | 003083 (8) | ref|XP_002266652.1| | 2e-74 | PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera] | 819 | 003083 (8) | ref|XP_011468343.1| | 4e-65 | PREDICTED: tether containing UBX domain for GLUT4 [Fragaria vesca subsp. vesca] |
| JMSF036E09 | Sequence | 600 | 003083 (8) | ref|XP_002266652.1| | 2e-76 | PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera] | 719 | 003083 (8) | ref|XP_011468343.1| | 8e-70 | PREDICTED: tether containing UBX domain for GLUT4 [Fragaria vesca subsp. vesca] |
| JMSF049E21 | Sequence | 638 | 003083 (8) | ref|XP_002266652.1| | 2e-80 | PREDICTED: tether containing UBX domain for GLUT4 isoform X2 [Vitis vinifera] | 723 | 003083 (8) | ref|XP_011468343.1| | 1e-67 | PREDICTED: tether containing UBX domain for GLUT4 [Fragaria vesca subsp. vesca] |
This contig is upended
. : . : . : . : . : . :
rJMFF025A17- TTGTTGTGTAAATCGTTTG
____________________________________________________________
consensus TTGTTGTGTAAATCGTTTG
. : . : . : . : . : . :
rJMFF025A17- TTTAGCTATCTAGTTGTATCCATCAGCCTAAGTAAAAAGGGAAATATAGTTTGGTGATAA
____________________________________________________________
consensus TTTAGCTATCTAGTTGTATCCATCAGCCTAAGTAAAAAGGGAAATATAGTTTGGTGATAA
. : . : . : . : . : . :
JMCP016D01+ AAAATAAAAGATTACAA
rJMFF025A17- TAGGAATTAGCACAGATGACACAAACTGCAGAATCAATAACCTAAAATAAAAGATTACAA
____________________________________________________________
consensus TAGGAATTAGCACAGATGACACAAACTGCAGAATCAATAACCTAAAATAAAAGATTACAA
. : . : . : . : . : . :
JMCP016D01+ GGTAGAAACCATATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
rJMFF025A17- GGTAGAAACCATATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
rJMSF036E09- ATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
rJMSF049E21- ATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
____________________________________________________________
consensus GGTAGAAACCATATATAGTACATTCAAATTCACATTTACTAAGGTTTTAAAAAAAAACAA
. : . : . : . : . : . :
JMCP016D01+ AAAATAAATTTGTTTGAACAaGCGAATGCTGCAGGCTGTAATGGAA
rJMFF025A17- AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
rJMSF036E09- AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
rJMSF049E21- AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
____________________________________________________________
consensus AAAATAAATTTGTTTGAACATGCGAATGCTGCAGGCTGTAATGGAACACTTTTCTTCTTT
. : . : . : . : . : . :
rJMFF025A17- TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
rJMSF036E09- TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
rJMSF049E21- TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
____________________________________________________________
consensus TCCTCCGTCGTCTGCTTCGGGGAGATGAATGGTCTTCAATTGCAGAGATGACCACCTGCA
. : . : . : . : . : . :
rJMFF025A17- CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
rJMSF036E09- CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
rJMSF049E21- CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
____________________________________________________________
consensus CATCCTCATCACAACTAGAATGGAAGTTGAGATCAACTGAAATCCATATCACATTTTTAA
. : . : . : . : . : . :
rJMFF025A17- CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
rJMSF036E09- CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
rJMSF049E21- CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
____________________________________________________________
consensus CCACTTGGGCTTAATGTTCTTTTTCTCTGCAGGCGGTTTTTGCTCTTGAGCAGGAGTGGG
. : . : . : . : . : . :
rJMFF025A17- CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
rJMSF036E09- CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
rJMSF049E21- CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
____________________________________________________________
consensus CTTGGCTTCTAAAGCTGGCTCAGCTACAGATTGAACAGGTTCAGCCTGCACGGTTTTAAA
. : . : . : . : . : . :
rJMFF025A17- TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
rJMSF036E09- TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
rJMSF049E21- TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
JMSF036E09+ TTAGGTAGTTCCCGGGGGCAACATCATC
JMFF025A17+ CCGGGGGCAACATCATC
JMSF049E21+ TCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
JMFF008B22+ CCCGGGGGCAACATCATC
____________________________________________________________
consensus TTCTAAGCCTTGCAAAGACAACACCTCCTCTTTTAGGTAGTTCCCGGGGGCAACATCATC
. : . : . : . : . : . :
rJMFF025A17- ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
rJMSF036E09- ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
rJMSF049E21- ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMSF036E09+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMFF025A17+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMSF049E21+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
JMFF008B22+ ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
____________________________________________________________
consensus ACCTTTTGGTACATCATAGGAGAAATATACGATTGCACCTGGAACAAAACCAGCAGAATA
. : . : . : . : . : . :
rJMFF025A17- AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
rJMSF036E09- AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
rJMSF049E21- AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMSF036E09+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMFF025A17+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMSF049E21+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
JMFF008B22+ AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
____________________________________________________________
consensus AAAATCCTGGGACATGTCTTTTATCTGCTTCTTGGGAGGAGTAGTATATAAGTAGAAAGG
. : . : . : . : . : . :
rJMFF025A17- CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
rJMSF036E09- CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
rJMSF049E21- CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMSF036E09+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMFF025A17+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMSF049E21+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
JMFF008B22+ CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTATGA
____________________________________________________________
consensus CAAATCTGGCCGCACAACCACTTTTATGAGAAGGTCAACTAAGCTCTGGATAGTCTCTGA
. : . : . : . : . : . :
rJMFF025A17- ANGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGNCTT
rJMSF036E09- AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
rJMSF049E21- AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMSF036E09+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMFF025A17+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMSF049E21+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
JMFF008B22+ AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
____________________________________________________________
consensus AGGATGAAATGTTGCTTCTAATGTGAAATTATCAGGAAATCGCACTCTGATTACGGCCTT
. : . : . : . : . : . :
rJMFF025A17- AGTTATCTTTGATCTACGTG
rJMSF036E09- AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGANTTTCTTTGTCTTCAAATA
rJMSF049E21- AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGANTTTCTTTGNCTTCAAATA
JMSF036E09+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
JMFF025A17+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
JMSF049E21+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
JMFF008B22+ AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
____________________________________________________________
consensus AGTTATCTTTGATCTACGTGCAGCTTCTTCTGCTTCTCTGATTTTCTTTGTCTTCAAATA
. : . : . : . : . : . :
rJMSF036E09- CTTATCTTCCT
rJMSF049E21- CTTATCTTCCTT
JMSF036E09+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
JMFF025A17+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
JMSF049E21+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
JMFF008B22+ CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
____________________________________________________________
consensus CTTATCTTCCTTCTTGGTTGATAATACACGGTAATAATCCTCAGCTGTAAACTCATAGAA
. : . : . : . : . : . :
JMSF036E09+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
JMFF025A17+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
JMSF049E21+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
JMFF008B22+ GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
____________________________________________________________
consensus GTCATCTGATTCTTCATTGTTAGAAACATCACTTGAGGCTGGAGTGTTGGTTATTGTTGA
. : . : . : . : . : . :
JMSF036E09+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
JMFF025A17+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
JMSF049E21+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
JMFF008B22+ AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
____________________________________________________________
consensus AAAGACACAAATTTCTCGTCCAAATTTTTCCTTTGCAGCTGCAAGCTGTGCCTTAGCTGA
. : . : . : . : . : . :
JMSF036E09+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
JMFF025A17+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
JMSF049E21+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
JMFF008B22+ TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
____________________________________________________________
consensus TTCGGCTTCCATGGGATCGGCAGTAGTTAACCTCCTTCGCTTTAGGGCAGCTGGGGAATC
. : . : . : . : . : . :
JMSF036E09+ AACTATCATCACCGGATACAAGCAATCGTCC
JMFF025A17+ AACTATCATCACCGGATACAAGCAATGGTCC
JMSF049E21+ AACTATCATCACCGGATACAAGCAATCGTCC
JMFF008B22+ AACTATCATCACCGGATACAAGCAATCGTCCGAATTTCAAATTTTCCTTTTTTCTCATGA
____________________________________________________________
consensus AACTATCATCACCGGATACAAGCAATCGTCCGAATTTCAAATTTTCCTTTTTTCTCATGA