Contig 003073:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006B03Sequence509003073 (11)ref|XP_011074970.1|2e-68PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]785002722 (11)dbj|BAP19108.1|4e-105elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMFF013M13Sequence514003073 (11)ref|XP_011074970.1|9e-79PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]
JMFF033H11Sequence523003073 (11)ref|XP_011074970.1|1e-83PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]713002722 (11)dbj|BAP19108.1|3e-105elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMFF042M12Sequence659003073 (11)ref|XP_011074970.1|3e-105PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]590002722 (11)dbj|BAP19108.1|4e-88elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMFF044A18Sequence633003073 (11)ref|XP_011074970.1|3e-95PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]623002722 (11)dbj|BAP19108.1|1e-90elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMFF049B13Sequence592003073 (11)ref|XP_011074970.1|1e-95PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]623002722 (11)dbj|BAP19108.1|1e-90elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMFF050F02Sequence618003073 (11)ref|XP_011074970.1|1e-103PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]577002722 (11)dbj|BAP19108.1|1e-78elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMFN036E16Sequence633003073 (11)ref|XP_011074970.1|1e-97PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]
JMSF004C05Sequence340003073 (11)ref|XP_011074970.1|4e-42PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]
JMSF009A13Sequence246003073 (11)ref|XP_011074970.1|5e-11PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]746002722 (11)dbj|BAP19108.1|4e-105elongation factor 1 gamma-like protein, partial [Ipomoea nil]
JMSF036O01Sequence645003073 (11)ref|XP_011074970.1|2e-97PREDICTED: elongation factor 1-gamma-like [Sesamum indicum]755002722 (11)dbj|BAP19108.1|4e-105elongation factor 1 gamma-like protein, partial [Ipomoea nil]

Alignment

This contig is upended


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JMFF050F02+                                             GGAATTCCTTAGTAAAGCTCTTAGTC
JMFF042M12+                                      ACATGAGGGAATTCCTTAGTANAGCTCTTAGTC
                      ____________________________________________________________
consensus                                        ACATGAGGGAATTCCTTAGTAAAGCTCTTAGTC
 
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JMFF050F02+           AAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATAATGTCAGCCAGTGTGACG
JMFF042M12+           AAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATAATGTCAGCCAGTGTGACG
JMFN036E16+                        ATCCAATGCTAAGATTGCAGGTCATAATAATGTCAGCCAGTGTGACG
JMFF049B13+                                  AAGATTGCAGGTCATAATAATGTCAGCCAGTGTGACG
JMFF044A18+                                  AAGATTGCAGGTCATAATAATGTCAGCCAGTGTGACG
JMSF036O01+                        ATCCAATGCTAAGATTGCAGGTCATAATAATGTCAGCCAGTGTGACG
                      ____________________________________________________________
consensus             AAGATCATCTTAAATCCAATGCTAAGATTGCAGGTCATAATAATGTCAGCCAGTGTGACG
 
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JMFF050F02+           GAGTGCCCAACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
JMFF042M12+           GAGTGCCCAACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
JMFN036E16+           GAGTGCCCAACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
JMFF049B13+           GAGTGCCCAACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
JMFF033H11+                    ACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
JMFF013M13+                                                 GTTCAAGGCATCCAATGCTCTC
JMFF044A18+           GAGTGCCCAACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
JMSF036O01+           GAGTGCCCAACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
                      ____________________________________________________________
consensus             GAGTGCCCAACCAAGAAGGTGTGAGAGGCAAGGTGCAGGTTCAAGGCATCCAATGCTCTC
 
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JMFF050F02+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMFF042M12+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMFN036E16+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMFF049B13+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMFF033H11+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMFF013M13+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMFF044A18+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMSF036O01+           TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
JMFF006B03+                                          GAGGCAAATATACACCCCAGCCAAGTCGA
                      ____________________________________________________________
consensus             TTAAGTGCAGAAACTGCAACTTCTTCAGCCGGAGGCAAATATACACCCCAGCCAAGTCGA
 
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JMFF050F02+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMFF042M12+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMFN036E16+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMFF049B13+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMFF033H11+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMFF013M13+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMFF044A18+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMSF036O01+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
JMFF006B03+           GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
                      ____________________________________________________________
consensus             GGATACAACCACCTGCCAATATTAGCATCAACCTCCGTAGCCGCGAAATCATTCCATTGT
 
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JMFF050F02+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMFF042M12+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMFN036E16+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMFF049B13+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMFF033H11+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMSF004C05+                                         CCAAAAAGTGGACCATCAGGCTTCAATTTA
JMFF013M13+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMFF044A18+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMSF036O01+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
JMFF006B03+           TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
                      ____________________________________________________________
consensus             TCAACATGGCCATATTCAATCAATGAAGAGCCAAAAAGTGGACCATCAGGCTTCAATTTA
 
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JMFF050F02+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMFF042M12+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMFN036E16+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMFF049B13+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMFF033H11+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMSF004C05+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMFF013M13+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMFF044A18+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMSF036O01+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
JMFF006B03+           GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
                      ____________________________________________________________
consensus             GCAACATATCGTGCAATTGCATTGCTCTCAAACACAGGCCCCTCAGGTGTTTCAAGCACA
 
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JMFF050F02+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMFF042M12+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMFN036E16+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMFF049B13+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMFF033H11+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMSF004C05+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMFF013M13+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMSF009A13+                                                           GATACACCCATC
JMFF044A18+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMSF036O01+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
JMFF006B03+           GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
                      ____________________________________________________________
consensus             GGAACCTTTCCAATTGGATTCATCTTAAGAAACTCAGGAGTCTTGTTTGATACACCCATC
 
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JMFF050F02+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMFF042M12+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMFN036E16+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMFF049B13+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMFF033H11+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMSF004C05+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMFF013M13+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMSF009A13+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMFF044A18+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMSF036O01+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
JMFF006B03+           TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
                      ____________________________________________________________
consensus             TGAAAGTCCTTCACTAATTCAATCTTTACACCATTGTATTCTGCAGCAATGAGAGCCTTG
 
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JMFF050F02+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMFF042M12+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMFN036E16+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMFF049B13+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMFF033H11+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMSF004C05+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMFF013M13+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMSF009A13+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMFF044A18+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMSF036O01+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
JMFF006B03+           CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
                      ____________________________________________________________
consensus             CAAGCATTTTTGTTCGTACTGGAGGAATGCAGAGTCAGAGCCATGGCTTCGGTGTAGAAA
 
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JMFF050F02+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGT        
JMFF042M12+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
JMFN036E16+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
JMFF049B13+           CTTCAATGGATTATCACCGCAGAAACCTG                               
JMFF033H11+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGT        
JMSF004C05+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
JMFF013M13+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
JMSF009A13+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
JMFF044A18+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
JMSF036O01+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
JMFF006B03+           CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
                      ____________________________________________________________
consensus             CTTCAATGGATTATCACCGCAGAAACCTGGGTTTGGCTCCGGAGAAAGTGGTGGAGGTTT
 
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JMFF042M12+           AGGGTTTCTGTTGATTGTGATCAAAT                                  
JMFN036E16+           AGGGTTTCTGTTGATTGTGATCAAATACGTGGGAATGTGGTTTGAG              
JMSF004C05+           AGGGTTTC                                                    
JMFF013M13+           AGGGTTTCTGTT                                                
JMSF009A13+           AGGGTTTCTGTTGATTGTGATCAAATACGTGGGAATGTGGTTTGAGAATCGT        
JMFF044A18+           AGGGTTTCTGTTGATTGTGATCAAATACGTGGGAATGTGGTTTGAGAATCGT        
JMSF036O01+           AGGGTTTCTGTTGATTGTGATCAAATACGTGGGAATGTGGTTTGAGAATCGT        
JMFF006B03+           AGGGTTTCTGTTGATTGTGATCAAATACGTGGGAATGTGGTTTGAGAATCGTTACATGGA
                      ____________________________________________________________
consensus             AGGGTTTCTGTTGATTGTGATCAAATACGTGGGAATGTGGTTTGAGAATCGTTACATGGA