Contig 003070:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS004H10+                           CCGAAATCGGAAACCTTCAAGTTCTCGTTCTCGTCCAACAACAG
                      ____________________________________________________________
consensus                             CCGAAATCGGAAACCTTCAAGTTCTCGTTCTCGTCCAACAACAG
 
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JMFS004H10+           GTTTTCCGGCTTCAAATCCCGGTGGGAAATGCCACGGCTGTGACAGAAATCCACGGCGCT
                      ____________________________________________________________
consensus             GTTTTCCGGCTTCAAATCCCGGTGGGAAATGCCACGGCTGTGACAGAAATCCACGGCGCT
 
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JMFS004H10+           GATAAGTTGCTGGAAGTATTTTCTCGCCGCGTCTTCCTCTAGCTTTCCCTTGGCAACCTT
                      ____________________________________________________________
consensus             GATAAGTTGCTGGAAGTATTTTCTCGCCGCGTCTTCCTCTAGCTTTCCCTTGGCAACCTT
 
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JMFS004H10+           AGCGAACAGCTCTCCGCCTCGGACGCACTCCATGACAAAGAAGATCTTGTGCTTGGTCGC
JMFF018A01+                                                          TGTGCTTGGTAGC
                      ____________________________________________________________
consensus             AGCGAACAGCTCTCCGCCTCGGACGCACTCCATGACAAAGAAGATCTTGTGCTTGGTCGC
 
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JMFS004H10+           CATGACTTCTTTGAGCTCGACGACGTTGGGGTGTTTGGCAAGCCGCATGACGGAGATTTC
JMFF018A01+           CATGACTTCTTTGAGCTCCACGATGTTTGGGTGCTTCACCAATCGCATGACTGAGATTTC
                      ____________________________________________________________
consensus             CATGACTTCTTTGAGCTCGACGATGTTTGGGTGTTTGGCCAGTCGCATGACTGAGATTTC
 
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JMFS004H10+           CCGCTTGATTTGCTCCATCATCCCCTCTTGCTT---GACGTGGTCTTTGTGTAAAGCCTT
JMFF018A01+           CCGCTGGATTTGCTCCATCATGGCCTCTTTCTTCGCCACATGGTCTTTGTGGATAACCTT
                      ____________________________________________________________
consensus             CCGCTTGATTTGCTCCATCATGGCCTCTTTCTTCGCGACGTGGTCTTTGTGTATAGCCTT
 
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JMFS004H10+           GATCGCAACGCTCTCGGAGGTTTCAAGGTTTCCGCCGTAGTAAACCTTGGCGAAAGTTCC
JMFF018A01+           GATGGCCACGCTCTCGGAGGTTTCCAGGTTTCTGCCGTAGTACACCTTGGCGAAGGTTCC
JMFF005D04+                     CTCTCGGAGGTTTCCAGGTTTCTGCCGTAGTACACCTTGGCGAAGGTTCC
                      ____________________________________________________________
consensus             GATGGCCACGCTCTCGGAGGTTTCCAGGTTTCTGCCGTAGTACACCTTGGCGAAGGTTCC
 
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JMFS004H10+           TTGGCCTAATAGCCTCCCCATCTCGTACTTCCCGAAA                       
JMFF018A01+           TTGACCCAGCAGCCTCCCCATCTCGTACTTCCCGAAATAATACCCCGACACGCTCCATTG
JMFF005D04+           TTGACCCAGCAGCCTCCCCATCTCGTACTTCCCGAAATAATACCCCGACACGCTCCATTG
                      ____________________________________________________________
consensus             TTGACCCAGCAGCCTCCCCATCTCGTACTTCCCGAAATAATACCCCGACACGCTCCATTG
 
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JMFF018A01+           AAAAGGTGGTGTTCAGATTGGGTTTCCATGGTGATATCCACTATTCAAGGCACTTACAAA
JMFF005D04+           AAAAGGTGGTGTTCAGATTGGGTTTCCATGGTGATATCCACTATTCAAGGCACTTACAAA
                      ____________________________________________________________
consensus             AAAAGGTGGTGTTCAGATTGGGTTTCCATGGTGATATCCACTATTCAAGGCACTTACAAA
 
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JMFF018A01+           ATCATTATATTGTGTTTGGGGCGGTTATCATGGTAGTAGTTGAATTGAGACGAAAAGTAA
JMFF005D04+           ATCATTATATTGTGTTTGGGGCGGTTATCATGGTAGTAGTTGAATTGAGACGAAAAGTAA
                      ____________________________________________________________
consensus             ATCATTATATTGTGTTTGGGGCGGTTATCATGGTAGTAGTTGAATTGAGACGAAAAGTAA
 
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JMFF018A01+           AGTGGGTTTGGAGAGTAGAAAACAATGATTTCGGTCGGGAAATTGGGTGGTGGTGGTGGC
JMFF005D04+           AGTGGGTTTGGAGAGTAGAAAACAATGATTTCGGTCGGGAAATTGGGTGGTGGTGGTGGC
                      ____________________________________________________________
consensus             AGTGGGTTTGGAGAGTAGAAAACAATGATTTCGGTCGGGAAATTGGGTGGTGGTGGTGGC
 
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JMFF018A01+           GGCGGTGGTGGTGGAGGGGTTGTAAGGTGGGTGTGGCTAAAAATTTGAGCTTTAAAGGAT
JMFF005D04+           GGCGGTGGTGGTGGAGGGGTTGTAAGGTGGGTGTGGCTAAAAATTTGAGCTTTAAAGGAT
                      ____________________________________________________________
consensus             GGCGGTGGTGGTGGAGGGGTTGTAAGGTGGGTGTGGCTAAAAATTTGAGCTTTAAAGGAT
 
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JMFF018A01+           GGGAATTGAAATGAATTGAATTGGACATAAAAGGGTGAGAAAGAGATAGTGCGTTGGATG
JMFF005D04+           GGGAATTGAAATGAATTGAATTGGACATAAAAGGGTGAGAAAGAGATAGTGCGTTGGATG
                      ____________________________________________________________
consensus             GGGAATTGAAATGAATTGAATTGGACATAAAAGGGTGAGAAAGAGATAGTGCGTTGGATG
 
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JMFF018A01+           TTTGCTAGTGAAAGGAGGACGTGGTTTTTCTAGTGTGGAGACAGTGGGAGTGAGGCAAGC
JMFF005D04+           TTTGCTAGTGAAAGGAGGACGTGGTTTTTCTAGTGTGGAGACAGTGGGAGTGAGGCAAGC
                      ____________________________________________________________
consensus             TTTGCTAGTGAAAGGAGGACGTGGTTTTTCTAGTGTGGAGACAGTGGGAGTGAGGCAAGC