Contig 003065:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004L09Sequence470003065 (3)ref|XP_006360179.1|3e-38PREDICTED: secologanin synthase-like [Solanum tuberosum]757013608 (3)ref|XP_006348902.1|2e-107PREDICTED: 11-oxo-beta-amyrin 30-oxidase-like isoform X2 [Solanum tuberosum]
JMSF027D14Sequence644003065 (3)ref|XP_006348303.1|6e-72PREDICTED: secologanin synthase-like [Solanum tuberosum]814013608 (3)ref|XP_006348902.1|3e-114PREDICTED: 11-oxo-beta-amyrin 30-oxidase-like isoform X2 [Solanum tuberosum]
JMSF048H09Sequence680003065 (3)ref|XP_006360179.1|1e-71PREDICTED: secologanin synthase-like [Solanum tuberosum]744013608 (3)ref|XP_006348902.1|9e-109PREDICTED: 11-oxo-beta-amyrin 30-oxidase-like isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048H09+ GGTCAGGCCACACATCCACCTCACAAGATGATGATGAT
JMSF027D14+ GATGATGAT
                      ____________________________________________________________
consensus GGTCAGGCCACACATCCACCTCACAAGATGATGATGAT
 
. : . : . : . : . : . :
JMSF048H09+ CCTTTTCCATACACAATCCCCTCCCATTTGCTTAGCATTTCAGAGCAGCTTAGCAAGAAC
JMSF027D14+ CCTTTTCCATACACAATCCCCTCCCATTTGCTTAGCATTTCAGAGCAGCTTAGCAAGAAC
                      ____________________________________________________________
consensus CCTTTTCCATACACAATCCCCTCCCATTTGCTTAGCATTTCAGAGCAGCTTAGCAAGAAC
 
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JMSF048H09+ GCAGGTTGCATAAGCTTTAGCTTCTCTGAATAGAAGGCAGGATTGATTATTCTTCTGTGT
JMSF027D14+ GCAGGTTGCATAAGCTTTAGCTTCTCTGAATAGAAGGCAGGATTGATTATTCTTCTGTGT
                      ____________________________________________________________
consensus GCAGGTTGCATAAGCTTTAGCTTCTCTGAATAGAAGGCAGGATTGATTATTCTTCTGTGT
 
. : . : . : . : . : . :
JMSF048H09+ TTTGCCCACTGCTCTTTCTCATAGCTGGCAAGTCCCCGTACCAACTTCTTCCCCAGTGGA
JMSF027D14+ TTTGCCCACTGCTCTTTCTCATAGCTGGCAAGTCCCCGTACCAACTTCTTCCCCAGTGGA
                      ____________________________________________________________
consensus TTTGCCCACTGCTCTTTCTCATAGCTGGCAAGTCCCCGTACCAACTTCTTCCCCAGTGGA
 
. : . : . : . : . : . :
JMSF048H09+ TTCATCTTAGGCTTTTGAAACAGATCATATTTGTTGAAAACCTCCTTGATTAGCTCAGGA
JMSF027D14+ TTCATCTTAGGCTTTTGAAACAGATCATATTTGTTGAAAACCTCCTTGATTAGCTCAGGA
JMFF004L09+ GCTTTTGAAACAGATCATATTTGTTGAAAACCTCCTTGATTAGCTCAGGA
                      ____________________________________________________________
consensus TTCATCTTAGGCTTTTGAAACAGATCATATTTGTTGAAAACCTCCTTGATTAGCTCAGGA
 
. : . : . : . : . : . :
JMSF048H09+ TCCCTGAGGAACACCGTAGGAATTGGACCCATCCATACATAACAGTTTTTTCCATATTTG
JMSF027D14+ TCCCTGAGGAACACCGTAGGAATTGGACCCATCCATACATAACAGTTTTTTCCATATTTG
JMFF004L09+ TCCCTGAGGAACACCGTAGGAATTGGACCCATCCATACATAACAGTTTTTTCCATATTTG
                      ____________________________________________________________
consensus TCCCTGAGGAACACCGTAGGAATTGGACCCATCCATACATAACAGTTTTTTCCATATTTG
 
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JMSF048H09+ TCGGTGAGGTGAACAAAATACGGCATGATTCTCGAGGCAACGTTATCCGACAGAGTCATG
JMSF027D14+ TCGGTGAGGTGAACAAAATACGGCATGATTCTCGAGGCAACGTTATCCGACAGAGTCATG
JMFF004L09+ TCGGTGAGGTGAACAAAATACGGCATGATTCTCGAGGCAACGTTATCCGACAGAGTCATG
                      ____________________________________________________________
consensus TCGGTGAGGTGAACAAAATACGGCATGATTCTCGAGGCAACGTTATCCGACAGAGTCATG
 
. : . : . : . : . : . :
JMSF048H09+ GGCTTGGAAAGGGCGTCAGTCGTCATCTTTGCGATGTCTTTCATGTCGCCGGAGAGGAAT
JMSF027D14+ GGCTTGGAAAGGGCGTCAGTCGTCATCTTTGCGATGTCTTTCATGTCGCCGGAGAGGAAT
JMFF004L09+ GGCTTGGAAAGGGCGTCAGTCGTCATCTTTGCGATGTCTTTCATGTCGCCGGAGAGGAAT
                      ____________________________________________________________
consensus GGCTTGGAAAGGGCGTCAGTCGTCATCTTTGCGATGTCTTTCATGTCGCCGGAGAGGAAT
 
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JMSF048H09+ CTGTAGGGGTTCCCTTTGAGGCCTTGCTGTTTAAGCCACTTCTCCAGCTTCTTCGGCTTA
JMSF027D14+ CTGTAGGGGTTCCCTTTGAGGCCTTGCTGTTTAAGCCACTTCTCCAGCTTCTTCGGCTTA
JMFF004L09+ CTGTAGGGGTTCCCTTTGAGGCCTTGCTGTTTAAGCCACTTCTCCAGCTTCTCCGGCTTA
                      ____________________________________________________________
consensus CTGTAGGGGTTCCCTTTGAGGCCTTGCTGTTTAAGCCACTTCTCCAGCTTCTTCGGCTTA
 
. : . : . : . : . : . :
JMSF048H09+ AACCACACCCAACCCAACACTCCCCATGCGTACGCCAACAAACCCGCTGAAAAGCACACT
JMSF027D14+ AACCACACCCAACCCAACACTCCCCATGCGTACGCCAACAAACCCGCTGAAAAGCACACT
JMFF004L09+ AACCACACCCAACCCAACACTCCCCATGCGTACGCCAACAAACCCGCTGAAAAGCACACT
                      ____________________________________________________________
consensus AACCACACCCAACCCAACACTCCCCATGCGTACGCCAACAAACCCGCTGAAAAGCACACT
 
. : . : . : . : . : . :
JMSF048H09+ CCCAGTAGGATGTATATCACCTCCATCT
JMSF027D14+ CCCAGTAGGATGTATATCACCTCCATCTCCGGCGAGGCAATCGGAAATGTGGGCGTTCTT
JMFF004L09+ CCCAGTAGGATGTATATCACCTCCATCTCCGGCGAGGCAATCGGAAATGTGGGCGTTCTT
                      ____________________________________________________________
consensus CCCAGTAGGATGTATATCACCTCCATCTCCGGCGAGGCAATCGGAAATGTGGGCGTTCTT
 
. : . : . : . : . : . :
JMSF027D14+ GAT
JMFF004L09+ GATTTCACGGCGGGTGTGGGTGTTATGATTCTATATATCAACACTGGTGTACTGAAACGT
                      ____________________________________________________________
consensus GATTTCACGGCGGGTGTGGGTGTTATGATTCTATATATCAACACTGGTGTACTGAAACGT