Contig 003063:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF044F04-                      AAGAGACAAATATTTTTTAGACGAACAAGAAGGGCATTATNTCTATAG
                      ____________________________________________________________
consensus                         AAGAGACAAATATTTTTTAGACGAACAAGAAGGGCATTATNTCTATAG
 
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rJMSF044F04-          ATTGTGTTGCTCATCTTGAATCCACTTTGCAGAAGCCACAAGCTAGCTAGGGAATCCCTA
                      ____________________________________________________________
consensus             ATTGTGTTGCTCATCTTGAATCCACTTTGCAGAAGCCACAAGCTAGCTAGGGAATCCCTA
 
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rJMSF044F04-          CATTCACTTAATTGAATCCCATCAGCTTAGTCACTCCTTTTTGTTGAATAGCAGTTGTAA
                      ____________________________________________________________
consensus             CATTCACTTAATTGAATCCCATCAGCTTAGTCACTCCTTTTTGTTGAATAGCAGTTGTAA
 
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rJMSF044F04-          TCATTTGCTCTACAATTGAAGATACTTGAGACTTTTGTGGTCAATTTTGATGGTGAAATG
                      ____________________________________________________________
consensus             TCATTTGCTCTACAATTGAAGATACTTGAGACTTTTGTGGTCAATTTTGATGGTGAAATG
 
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rJMSF044F04-          TCCATCGTCCCCCTTCCAAGCAAATATGGTCTCCATATTTTCACTTAAGAAATGAGTGAA
JMSF044F04+                     CCCTTCCAAGCAAATATGGTCTCCATATTTTCACTTAAGAAATGAGTGAA
                      ____________________________________________________________
consensus             TCCATCGTCCCCCTTCCAAGCAAATATGGTCTCCATATTTTCACTTAAGAAATGAGTGAA
 
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rJMSF044F04-          ATGGCATCATCCATCAGATCTCTAATCATCCCAGAAGCAGAAACCAAAATATATAACAGA
JMSF044F04+           ATGGCATCATCCATCAGATCTCTAATCATCCCAGAAGCAGAAACCAAAATATATAACAGA
                      ____________________________________________________________
consensus             ATGGCATCATCCATCAGATCTCTAATCATCCCAGAAGCAGAAACCAAAATATATAACAGA
 
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rJMSF044F04-          GTAGTCACCCTGAACATAGCCTTCAAAATTTGTCTTCAAACAATTTCTCCTTCACCTCTC
JMSF044F04+           GTAGTCACCCTGAACATAGCCTTCAAAATTTGTCTTCAAACAATTTCTCCTTCACCTCTC
                      ____________________________________________________________
consensus             GTAGTCACCCTGAACATAGCCTTCAAAATTTGTCTTCAAACAATTTCTCCTTCACCTCTC
 
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rJMSF044F04-          TCTTCCACATTCTTTCTCAGATATTTACTCTTTCTGGCTGGAAACAGTAAATTAAGTTAA
JMSF044F04+           TCTTCCACATTCTTTCTCAGATATTTACTCTTTCTGGCTGGAAACAGTAAATTAAGTTAA
JMFS012H04+                                                                  GTTAA
                      ____________________________________________________________
consensus             TCTTCCACATTCTTTCTCAGATATTTACTCTTTCTGGCTGGAAACAGTAAATTAAGTTAA
 
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rJMSF044F04-          AAATTGGTGAATAGACAGCAGGTAGATAGGTAAGGAAATTGTTAGATATGTGAAGAGTCA
JMSF044F04+           AAATTGGTGAATAGACAGCAGGTAGATAGGTAAGGAAATTGTTAGATATGTGAAGAGTCA
JMFS012H04+           AAATTGGTGAATAGACAGCAGGTAGATAGGTAAGGAAATTGTTAGATATGTGAAGAGTCA
JMSF051I12+                                                       GATATGTGAAGAGTCA
JMFF004H04+                                                                 GAGTCA
                      ____________________________________________________________
consensus             AAATTGGTGAATAGACAGCAGGTAGATAGGTAAGGAAATTGTTAGATATGTGAAGAGTCA
 
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rJMSF044F04-          TAGGTATGTGAAGAGTCATAGGAATGTGAAGAGGCATGATAACAGTAGCCTAGCATGTAT
JMSF044F04+           TAGGTATGTGAAGAGTCATAGGAATGTGAAGAGGCATGATAACAGTAGCCTAGCATGTAT
JMFS012H04+           TAGGTATGTGAAGAGTCATAGGAATGTGAAGAGGCATGATAACAGTAGCCTAGCATGTAT
JMSF051I12+           TAGGTANGTGAAGAGTCATAGGAATGTGAAGAGGCATGATAACAGTAGCCTAGCATGTAT
JMFF004H04+           TAGGTATGTGAAGAGTCATAGGAATGTGAAGAGGCATGATAACAGTAGCCTAGCATGTAT
                      ____________________________________________________________
consensus             TAGGTATGTGAAGAGTCATAGGAATGTGAAGAGGCATGATAACAGTAGCCTAGCATGTAT
 
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rJMSF044F04-          ATATATGCCAGTGTGGTTGTGAAGTTAAAAAGGAAGAAGTAATAGATATATAGAGAGTTT
JMSF044F04+           ATATATGCCAGTGTGGTTGTGAAGTTAAAAAGGAAGAAGTAATAGATATATAGAGAGTTT
JMFS012H04+           ATATATGCCAGTGTGGTTGTGAAGTTAAAAAGGAAGAAGTAATAGATATATAGAGAGTTT
JMSF051I12+           ATATATGCCAGTGTGGTTGTGAAGTTAAAAAGGAAGAAGTAATAGATATATAGAGAGTTT
JMFF004H04+           ATATATGCCAGTGTGGTTGTGAAGTTAAAAAGGAAGAAGTAATAGATATATAGAGAGTTT
                      ____________________________________________________________
consensus             ATATATGCCAGTGTGGTTGTGAAGTTAAAAAGGAAGAAGTAATAGATATATAGAGAGTTT
 
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rJMSF044F04-          TTCTTGATTAACACGGTATCAGAGCCCAGTGGGCATTGATCGGCGCGAGGCGACTTCACT
JMSF044F04+           TTCTTGATTAACACGGTATCAGAGCCCAGTGGGCATTGATCGGCGCGAGGCGACTTCACT
JMFS012H04+           TTCTTGATTAACACGGTATCAGAGCCCAGTGGGCATTGATCGGCGCGAGGCGACTTCACT
JMSF051I12+           TTCTTGATTAACACGGTATCAGAGCCCAGTGGGCATTGATCGGCGCGAGGCGACTTCACT
JMFF004H04+           TTCTTGATTAACACGGTATCAGAGCCCAGTGGGCATTGATCGGCGCGAGGCGACTTCACT
                      ____________________________________________________________
consensus             TTCTTGATTAACACGGTATCAGAGCCCAGTGGGCATTGATCGGCGCGAGGCGACTTCACT
 
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rJMSF044F04-          GGCAGGAGTTTCGCGGCGAAACGGAGCCTCCACGCGTCGCCGCAATCCAG          
JMSF044F04+           GGCAGGAGTTTCGCGGCG-AACGGAGCCTCCACGCGTCGCCGCAATCCAGAGGTCCCGAC
JMFS012H04+           GGCAGGAGTTTCGCGGCG-AACGGAGCCTCCACGCGTCGCCGCAATCCAGAGGTCCCGAC
JMSF051I12+           GGCAGGAGTTTCGCGGCG-AACGGAGCCTCCACGCGTCGCCGCAATCCAGAGGTCCCGAC
JMFF004H04+           GGCAGGAGTTTCGCGGCG-AACGGAGCCTCCACGCGTCGCCGCAATCCAGAGGTCCCGAC
                      ____________________________________________________________
consensus             GGCAGGAGTTTCGCGGCG-AACGGAGCCTCCACGCGTCGCCGCAATCCAGAGGTCCCGAC
 
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JMSF044F04+           GCCACGCGCCGGCACGTGTGCTCTGTTCCAGCGTCCTCTCCGGTCAAGGCGAGTACTGGC
JMFS012H04+           GCCACGCGCCGGCACGTGTGCTCTGTTCCAGCGTCCTCTCCGGTCAAGGCGAGTACTGGC
JMSF051I12+           GCCACGCGCCGGCACGTGTGCTCTGTTCCAGCGTCCTCTCCGGTCAAGGCGAGTACTGGC
JMFF004H04+           GCCACGCGCCGGCACGTGTGCTCTGTTCCAGCGTCCTCTCCGGTCAAGGCGAGTACTGGC
                      ____________________________________________________________
consensus             GCCACGCGCCGGCACGTGTGCTCTGTTCCAGCGTCCTCTCCGGTCAAGGCGAGTACTGGC
 
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JMSF044F04+           AGGCTCGTCTCTGTGAGCCCAGTAGGTCTAGGGTGGTGGTGGAGGCGCATGAGGCCATTT
JMFS012H04+           AGGCTCGTCTCTGTGAGCCCAGTAGGTCTAGGGTGGTGGTGGAGGCGCATGAGGCCATTT
JMSF051I12+           AGGCTCGTCTCTGTGAGCCCAGTAGGTCTAGGGTGGTGGTGGAGGCGCATGAGGCCATTT
JMFF004H04+           AGGCTCGTCTCTGTGAGCCCAGTAGGTCTAGGGTGGTGGTGGAGGCGCATGAGGCCATTT
                      ____________________________________________________________
consensus             AGGCTCGTCTCTGTGAGCCCAGTAGGTCTAGGGTGGTGGTGGAGGCGCATGAGGCCATTT
 
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JMSF044F04+           CCGGCAAAATATTGTCTTTTTCGTCTCGTTTTGGTGAGCCCATTTCGTCAAGGTATGGTT
JMFS012H04+           CCGGCAAAATATTGTCTTTTTCGTCTCGTTTTGGTGAGCCCATTTCGTCAAGGTATGGTT
JMSF051I12+           CCGGCAAAATATNGTCTTTTTCGTCTCGTTTTGGTGAGCCCATTTNGTCAAGGTATGGTT
JMFF004H04+           CCGGCAAAATATTGTCTTTTTCGTCTCGTTTTGGTGAGCCCATTTCGTCAAGGTATGGTT
                      ____________________________________________________________
consensus             CCGGCAAAATATTGTCTTTTTCGTCTCGTTTTGGTGAGCCCATTTCGTCAAGGTATGGTT
 
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JMSF044F04+           TATGATGTGTTGGAGTATAGATTGTTGGTGGCATGTTGTTTTAGCTCGGTT         
JMFS012H04+           TATGATGTGTTGGAGTATAGATTGTTGGTGGCATGTTGTTTTAGCTCGGTTGAGGACCCG
JMSF051I12+           TATGATGTGTTGGANTATAGATTGTTGGTGGCATGTTGTTTTAGCTCGGTTGAGGACCCG
JMFF004H04+           TATGATGTGTTGGAGTATAGATTGTTGGTGGCATGTTGTTTTAGCTCGGTTGAGGACCCG
                      ____________________________________________________________
consensus             TATGATGTGTTGGAGTATAGATTGTTGGTGGCATGTTGTTTTAGCTCGGTTGAGGACCCG
 
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JMFS012H04+           GCAGTGGGTATTTTCCAGCAGCTGATAACGACGACGCCGGGTTAAGTGGTTAGTGACGGC
JMSF051I12+           GCAGTGGGTATTTTCCAGCAGCTGATAACGACGACGCCGGGTTAAGTGG---GTGACGGC
JMFF004H04+           GCAGTGGGTATTTTCCAGCAGCTGATAACGACGACGCCGGGTTAAGTGGTTAGTGACGGC
                      ____________________________________________________________
consensus             GCAGTGGGTATTTTCCAGCAGCTGATAACGACGACGCCGGGTTAAGTGGTTAGTGACGGC
 
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JMFS012H04+           CGCCAGCGACTATGGTCAGTAGGTGTGTGTTGCTGTTG                      
JMSF051I12+           CGCCAGCGACTATGGTCAGTAGGTGTGTGTTGCTGTTGGGATGGTCAGTAGGTTTGT   
JMFF004H04+           CGCCAGCGACTATGGTCAGTAGGTGTGTGTTGCTGTTGGGATGGTCAGTAGGTTTGTGTT
                      ____________________________________________________________
consensus             CGCCAGCGACTATGGTCAGTAGGTGTGTGTTGCTGTTGGGATGGTCAGTAGGTTTGTGTT