Contig 003062:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004D03Sequence593003062 (3)ref|XP_009599051.1|7e-89PREDICTED: ceramide-1-phosphate transfer protein [Nicotiana tomentosiformis]759003062 (3)gb|AIU50567.1|2e-82accelerated cell death 11, partial [Theobroma cacao]
JMSF014H21Sequence461003062 (3)ref|XP_009599051.1|7e-60PREDICTED: ceramide-1-phosphate transfer protein [Nicotiana tomentosiformis]770023483emb|CDP17202.1|2e-110unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF004D03- TGTTT
                      ____________________________________________________________
consensus TGTTT
 
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rJMFF004D03- TTATATATAATCTTATCAACTATTTACAATTTTACACGTTATCATTGTCACATCATTATT
                      ____________________________________________________________
consensus TTATATATAATCTTATCAACTATTTACAATTTTACACGTTATCATTGTCACATCATTATT
 
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rJMFF004D03- GCCACTAAAATTCTGGGTATACATGTATTTACCCAACAAAAAAAGTAATATAAAAAATCT
                      ____________________________________________________________
consensus GCCACTAAAATTCTGGGTATACATGTATTTACCCAACAAAAAAAGTAATATAAAAAATCT
 
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rJMFF004D03- GGCCATACGTGTGTATACTTATATATATAATTACTACAATAAAGGGAGTTCTGTGATTGC
                      ____________________________________________________________
consensus GGCCATACGTGTGTATACTTATATATATAATTACTACAATAAAGGGAGTTCTGTGATTGC
 
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rJMFF004D03- AAAGTTTCGGCATTAAATTTAGGAATAATTAATTCTGAGATACTACACAACAGTTAAATA
                      ____________________________________________________________
consensus AAAGTTTCGGCATTAAATTTAGGAATAATTAATTCTGAGATACTACACAACAGTTAAATA
 
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rJMFF004D03- CGGAGCAGTANACATTGAGGTGATTGATGATGATGCGATCTGTCTGTATTTCTTCCATAT
                      ____________________________________________________________
consensus CGGAGCAGTANACATTGAGGTGATTGATGATGATGCGATCTGTCTGTATTTCTTCCATAT
 
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rJMFF004D03- TCACCAGTCTGTACCCAATTCTTTTGAAATGAAAAGTTTGTCAATGTAGGTGACGATGGG
                      ____________________________________________________________
consensus TCACCAGTCTGTACCCAATTCTTTTGAAATGAAAAGTTTGTCAATGTAGGTGACGATGGG
 
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rJMFF004D03- AGCTGCCGAGGCAACATAACATTCCATGTGAATCTTTGCAGAGGCTTCGTCTTCATTGAG
                      ____________________________________________________________
consensus AGCTGCCGAGGCAACATAACATTCCATGTGAATCTTTGCAGAGGCTTCGTCTTCATTGAG
 
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rJMFF004D03- CTTGTTTAACAGCTGTGCCTTAGTGGGAAGAGCATACATTCCTGCAGCTACAGCTTTCCA
JMFF004D03+ AACAGCTGTGCCTTAGTGGGAAGAGCATACATTCCTGCAGCTACAGCTTTCCA
                      ____________________________________________________________
consensus CTTGTTTAACAGCTGTGCCTTAGTGGGAAGAGCATACATTCCTGCAGCTACAGCTTTCCA
 
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rJMFF004D03- TATTACCCATCCATGGTAAGGAGCAAACACCTGCTCATAAGCATTTGAAGCTGGATCCTT
JMFF004D03+ TATTACCCATCCATGGTAAGGAGCAAACACCTGCTCATAAGCATTTGAAGCTGGATCCTT
                      ____________________________________________________________
consensus TATTACCCATCCATGGTAAGGAGCAAACACCTGCTCATAAGCATTTGAAGCTGGATCCTT
 
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rJMFF004D03- CAGAGAGTTTCCTCCAGTGGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
JMSF014H21+ GGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
JMFF004D03+ CAGAGAGTTTCCTCCAGTGGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
                      ____________________________________________________________
consensus CAGAGAGTTTCCTCCAGTGGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
 
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rJMFF004D03- ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
JMSF014H21+ ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
JMFF004D03+ ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
                      ____________________________________________________________
consensus ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
 
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rJMFF004D03- AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
JMSF014H21+ AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
JMFF004D03+ AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
                      ____________________________________________________________
consensus AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
 
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rJMFF004D03- ATCAACCTTGGCGACATAGTCGAGCTCGGCGAAC
JMSF014H21+ ATCAACCTTGGCGACATAGTCGAGCTCGGCGAACTTGAAGGCGATGCCGAGGCAGCGGAA
JMFF004D03+ ATCAACCTTGGCGACATAGTCGAGCTCGGCGAACTTGAAGGCGATGCCGAGGCAGCGGAA
                      ____________________________________________________________
consensus ATCAACCTTGGCGACATAGTCGAGCTCGGCGAACTTGAAGGCGATGCCGAGGCAGCGGAA
 
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JMSF014H21+ GAGAGGGGAGACAAGTGAACTGGCGCGAGAGAATGCGCCGACTTCTAGCTGAGCTTCTTC
JMFF004D03+ GAGAGGGGAGACAAGTGAACTGGCGCGAGAGAATGCGCCGACTTCTAGCTGAGCTTCTTC
                      ____________________________________________________________
consensus GAGAGGGGAGACAAGTGAACTGGCGCGAGAGAATGCGCCGACTTCTAGCTGAGCTTCTTC
 
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JMSF014H21+ AGGTGATTGCGAAGTGATGATGGAGTTGGATAGGTTCTTGAAAGCCTCAGCCATCTTCCT
JMFF004D03+ AGGTGATTGCGAAGTGATGATGGAGTTGGATAGGTTCTTGAAAGCCTCAGCCATCTTCCT
                      ____________________________________________________________
consensus AGGTGATTGCGAAGTGATGATGGAGTTGGATAGGTTCTTGAAAGCCTCAGCCATCTTCCT
 
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JMSF014H21+ CAATGGCTTTTCTTCGTCCGCCATTGAAGAATCACTAAGCTCTTTCTCGTCTCGTCTCTT
JMFF004D03+ CAATGGCTTTTCTTCGTCCGCCATTGAAGAATCACTAAGCTCTTTCTCGTCTCGTCTCTT
                      ____________________________________________________________
consensus CAATGGCTTTTCTTCGTCCGCCATTGAAGAATCACTAAGCTCTTTCTCGTCTCGTCTCTT
 
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JMSF014H21+ CTCTTCTCAACTCTGAAGACTAGCGTGTCATCGAACTCCACGGATCTATTTTCTC
JMFF004D03+ CTCTTCTCAACTCTGAAGACTAGCGTGTCATCGAACTCCACGGATCTATTTTCTCTATAT
                      ____________________________________________________________
consensus CTCTTCTCAACTCTGAAGACTAGCGTGTCATCGAACTCCACGGATCTATTTTCTCTATAT