Contig 003062:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004D03Sequence593003062 (3)ref|XP_009599051.1|7e-89PREDICTED: ceramide-1-phosphate transfer protein [Nicotiana tomentosiformis]759003062 (3)gb|AIU50567.1|2e-82accelerated cell death 11, partial [Theobroma cacao]
JMSF014H21Sequence461003062 (3)ref|XP_009599051.1|7e-60PREDICTED: ceramide-1-phosphate transfer protein [Nicotiana tomentosiformis]770023483emb|CDP17202.1|2e-110unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF004D03-                                                                 TGTTT
                      ____________________________________________________________
consensus                                                                    TGTTT
 
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rJMFF004D03-          TTATATATAATCTTATCAACTATTTACAATTTTACACGTTATCATTGTCACATCATTATT
                      ____________________________________________________________
consensus             TTATATATAATCTTATCAACTATTTACAATTTTACACGTTATCATTGTCACATCATTATT
 
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rJMFF004D03-          GCCACTAAAATTCTGGGTATACATGTATTTACCCAACAAAAAAAGTAATATAAAAAATCT
                      ____________________________________________________________
consensus             GCCACTAAAATTCTGGGTATACATGTATTTACCCAACAAAAAAAGTAATATAAAAAATCT
 
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rJMFF004D03-          GGCCATACGTGTGTATACTTATATATATAATTACTACAATAAAGGGAGTTCTGTGATTGC
                      ____________________________________________________________
consensus             GGCCATACGTGTGTATACTTATATATATAATTACTACAATAAAGGGAGTTCTGTGATTGC
 
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rJMFF004D03-          AAAGTTTCGGCATTAAATTTAGGAATAATTAATTCTGAGATACTACACAACAGTTAAATA
                      ____________________________________________________________
consensus             AAAGTTTCGGCATTAAATTTAGGAATAATTAATTCTGAGATACTACACAACAGTTAAATA
 
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rJMFF004D03-          CGGAGCAGTANACATTGAGGTGATTGATGATGATGCGATCTGTCTGTATTTCTTCCATAT
                      ____________________________________________________________
consensus             CGGAGCAGTANACATTGAGGTGATTGATGATGATGCGATCTGTCTGTATTTCTTCCATAT
 
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rJMFF004D03-          TCACCAGTCTGTACCCAATTCTTTTGAAATGAAAAGTTTGTCAATGTAGGTGACGATGGG
                      ____________________________________________________________
consensus             TCACCAGTCTGTACCCAATTCTTTTGAAATGAAAAGTTTGTCAATGTAGGTGACGATGGG
 
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rJMFF004D03-          AGCTGCCGAGGCAACATAACATTCCATGTGAATCTTTGCAGAGGCTTCGTCTTCATTGAG
                      ____________________________________________________________
consensus             AGCTGCCGAGGCAACATAACATTCCATGTGAATCTTTGCAGAGGCTTCGTCTTCATTGAG
 
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rJMFF004D03-          CTTGTTTAACAGCTGTGCCTTAGTGGGAAGAGCATACATTCCTGCAGCTACAGCTTTCCA
JMFF004D03+                  AACAGCTGTGCCTTAGTGGGAAGAGCATACATTCCTGCAGCTACAGCTTTCCA
                      ____________________________________________________________
consensus             CTTGTTTAACAGCTGTGCCTTAGTGGGAAGAGCATACATTCCTGCAGCTACAGCTTTCCA
 
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rJMFF004D03-          TATTACCCATCCATGGTAAGGAGCAAACACCTGCTCATAAGCATTTGAAGCTGGATCCTT
JMFF004D03+           TATTACCCATCCATGGTAAGGAGCAAACACCTGCTCATAAGCATTTGAAGCTGGATCCTT
                      ____________________________________________________________
consensus             TATTACCCATCCATGGTAAGGAGCAAACACCTGCTCATAAGCATTTGAAGCTGGATCCTT
 
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rJMFF004D03-          CAGAGAGTTTCCTCCAGTGGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
JMSF014H21+                             GGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
JMFF004D03+           CAGAGAGTTTCCTCCAGTGGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
                      ____________________________________________________________
consensus             CAGAGAGTTTCCTCCAGTGGCCAGAATTTGCTCAAACAAAACTTTAACCATATCTATCCC
 
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rJMFF004D03-          ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
JMSF014H21+           ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
JMFF004D03+           ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
                      ____________________________________________________________
consensus             ACGCTTCACTCTTAACAGATTCCTTGTATGACTGCCAGCTCTTCTCACACAATTTCCGTC
 
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rJMFF004D03-          AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
JMSF014H21+           AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
JMFF004D03+           AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
                      ____________________________________________________________
consensus             AATATCTAAATCCATCATTGCTCTTAATGTTGAAATCGACTTTGATGCCTCTGCAAGATC
 
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rJMFF004D03-          ATCAACCTTGGCGACATAGTCGAGCTCGGCGAAC                          
JMSF014H21+           ATCAACCTTGGCGACATAGTCGAGCTCGGCGAACTTGAAGGCGATGCCGAGGCAGCGGAA
JMFF004D03+           ATCAACCTTGGCGACATAGTCGAGCTCGGCGAACTTGAAGGCGATGCCGAGGCAGCGGAA
                      ____________________________________________________________
consensus             ATCAACCTTGGCGACATAGTCGAGCTCGGCGAACTTGAAGGCGATGCCGAGGCAGCGGAA
 
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JMSF014H21+           GAGAGGGGAGACAAGTGAACTGGCGCGAGAGAATGCGCCGACTTCTAGCTGAGCTTCTTC
JMFF004D03+           GAGAGGGGAGACAAGTGAACTGGCGCGAGAGAATGCGCCGACTTCTAGCTGAGCTTCTTC
                      ____________________________________________________________
consensus             GAGAGGGGAGACAAGTGAACTGGCGCGAGAGAATGCGCCGACTTCTAGCTGAGCTTCTTC
 
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JMSF014H21+           AGGTGATTGCGAAGTGATGATGGAGTTGGATAGGTTCTTGAAAGCCTCAGCCATCTTCCT
JMFF004D03+           AGGTGATTGCGAAGTGATGATGGAGTTGGATAGGTTCTTGAAAGCCTCAGCCATCTTCCT
                      ____________________________________________________________
consensus             AGGTGATTGCGAAGTGATGATGGAGTTGGATAGGTTCTTGAAAGCCTCAGCCATCTTCCT
 
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JMSF014H21+           CAATGGCTTTTCTTCGTCCGCCATTGAAGAATCACTAAGCTCTTTCTCGTCTCGTCTCTT
JMFF004D03+           CAATGGCTTTTCTTCGTCCGCCATTGAAGAATCACTAAGCTCTTTCTCGTCTCGTCTCTT
                      ____________________________________________________________
consensus             CAATGGCTTTTCTTCGTCCGCCATTGAAGAATCACTAAGCTCTTTCTCGTCTCGTCTCTT
 
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JMSF014H21+           CTCTTCTCAACTCTGAAGACTAGCGTGTCATCGAACTCCACGGATCTATTTTCTC     
JMFF004D03+           CTCTTCTCAACTCTGAAGACTAGCGTGTCATCGAACTCCACGGATCTATTTTCTCTATAT
                      ____________________________________________________________
consensus             CTCTTCTCAACTCTGAAGACTAGCGTGTCATCGAACTCCACGGATCTATTTTCTCTATAT