Contig 003058:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003L08Sequence525003058 (2)ref|XP_009778598.1|3e-51PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris]732013602 (2)ref|XP_009617349.1|4e-60PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana tomentosiformi
JMFF032A03Sequence569003058 (2)ref|XP_009778598.1|2e-48PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana sylvestris]747013602 (2)ref|XP_009617349.1|2e-64PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana tomentosiformi

Alignment

This contig is upended


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JMFF032A03+ CATTCTGACGCGTGTCCGAGCCATAATCACCACTCTCTCCATCACTT
                      ____________________________________________________________
consensus CATTCTGACGCGTGTCCGAGCCATAATCACCACTCTCTCCATCACTT
 
. : . : . : . : . : . :
JMFF032A03+ CCGGAGCTCGAATTCCCACCGCTCCAATTACCGGAGCTACGGCGGGAATTCAGGTTTTCA
JMFF003L08+ CCACCGCTCCAATTACCGGAGCTACGNCGGGAATTCAGGTTTTCA
                      ____________________________________________________________
consensus CCGGAGCTCGAATTCCCACCGCTCCAATTACCGGAGCTACGGCGGGAATTCAGGTTTTCA
 
. : . : . : . : . : . :
JMFF032A03+ GGCGAACTTGGCAGCTGGTTCCGCCGTCTATACTCCAGGCAAACACAAACTATGTGGAGC
JMFF003L08+ GGCGAACTTGGCAGCTGGTTCCGCCGTCTATACTCCAGGCAAACACAAACTATGTGGAGC
                      ____________________________________________________________
consensus GGCGAACTTGGCAGCTGGTTCCGCCGTCTATACTCCAGGCAAACACAAACTATGTGGAGC
 
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JMFF032A03+ ACACACTGGAAATCATACCCGACAATCCAGAGCCTGAGCGGCATCATAGGGGACTCGTCA
JMFF003L08+ ACACACTGGAAATCATACCCGACAATCCAGAGCCTGAGCGGCATCATAGGGGACTCGTCA
                      ____________________________________________________________
consensus ACACACTGGAAATCATACCCGACAATCCAGAGCCTGAGCGGCATCATAGGGGACTCGTCA
 
. : . : . : . : . : . :
JMFF032A03+ CGGCTCATCACTAGCACGGATATCGAGACGAGGACGAAAGCTAAATTCCAGAAGAGATCG
JMFF003L08+ CGGCTCATCACTAGCACGGATATCGAGACGAGGACGAAAGCTAAATTCCAGAAGAGATCG
                      ____________________________________________________________
consensus CGGCTCATCACTAGCACGGATATCGAGACGAGGACGAAAGCTAAATTCCAGAAGAGATCG
 
. : . : . : . : . : . :
JMFF032A03+ AGAAGCACAATAGGTTTGGAGTAGGCCCAATCGCTCTGCCTCTCCTCGATTTGCTCGGCC
JMFF003L08+ AGAAGCACAATAGGTTTGGAGTAGGCCCAATCGCTCTGCCTCTCCTCGATTTGCTCGGCC
                      ____________________________________________________________
consensus AGAAGCACAATAGGTTTGGAGTAGGCCCAATCGCTCTGCCTCTCCTCGATTTGCTCGGCC
 
. : . : . : . : . : . :
JMFF032A03+ GCCGACTCGCGCACCCGCATAGACGGCTCGCGCATCATCCTCCGGCTGCTAGCGCGCCTG
JMFF003L08+ GCCGACTCGCGCACCCGCATAGACGGCTCGCGCATCATCCTCCGGCTGCTAGCGCGCCTG
                      ____________________________________________________________
consensus GCCGACTCGCGCACCCGCATAGACGGCTCGCGCATCATCCTCCGGCTGCTAGCGCGCCTG
 
. : . : . : . : . : . :
JMFF032A03+ AGGAAGCGAGCCGCCCCTCGTAGGCTAGGCGGACGGCGCATAAATCTTCGGCTTCCAAAG
JMFF003L08+ AGGAAGCGAGCCGCCCCTCGTAGGCTAGGCGGACGGCGCATAAATCTTCGGCTTCCAAAG
                      ____________________________________________________________
consensus AGGAAGCGAGCCGCCCCTCGTAGGCTAGGCGGACGGCGCATAAATCTTCGGCTTCCAAAG
 
. : . : . : . : . : . :
JMFF032A03+ ATCTGGTCGCCCAGCAAAGGTGTCGTATCGACTCCATCGTTACCTTCCCCGCCGGAATTA
JMFF003L08+ ATCTGGTCGCCCAGCAAAGGTGTCGTATCGACTCCATCGTTACCTTCCCCGCCGGAATTA
                      ____________________________________________________________
consensus ATCTGGTCGCCCAGCAAAGGTGTCGTATCGACTCCATCGTTACCTTCCCCGCCGGAATTA
 
. : . : . : . : . : . :
JMFF032A03+ ACGTTCACGTTGGTAGTGTCGTCGTCCGGAGCTCTCGCCAT
JMFF003L08+ ACGTTCACGTTGGTAGTGTCGTCGTCCGGAGCTCTCGCCATTGGAGTAATCGCCAATAAT
                      ____________________________________________________________
consensus ACGTTCACGTTGGTAGTGTCGTCGTCCGGAGCTCTCGCCATTGGAGTAATCGCCAATAAT