| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001J17 | Sequence | 561 | 003045 (4) | emb|CDP10064.1| | 2e-84 | unnamed protein product [Coffea canephora] | 714 | 007064 (4) | ref|XP_009785574.1| | 314 | PREDICTED: polyol transporter 5-like isoform X1 [Nicotiana sylvestris] |
| JMFF031O14 | Sequence | 520 | 003045 (4) | emb|CDP10064.1| | 3e-76 | unnamed protein product [Coffea canephora] | |||||
| JMSF012K18 | Sequence | 516 | 003045 (4) | emb|CDP10064.1| | 2e-75 | unnamed protein product [Coffea canephora] | 809 | 007064 (4) | ref|XP_009785574.1| | 288 | PREDICTED: polyol transporter 5-like isoform X1 [Nicotiana sylvestris] |
| JMSF039G14 | Sequence | 670 | 003045 (4) | emb|CDP10064.1| | 2e-107 | unnamed protein product [Coffea canephora] | 933 | 007064 (4) | ref|XP_009785574.1| | 347 | PREDICTED: polyol transporter 5-like isoform X1 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF039G14+ CATCACCAGCCA
____________________________________________________________
consensus CATCACCAGCCA
. : . : . : . : . : . :
JMSF039G14+ ACGAGGTGANTCCGGCATGGCGAGGACGCCGAGGGCCAATATGGCCGACGGAATCACCCC
____________________________________________________________
consensus ACGAGGTGANTCCGGCATGGCGAGGACGCCGAGGGCCAATATGGCCGACGGAATCACCCC
. : . : . : . : . : . :
JMSF039G14+ GATTCCCATCATTAATCGCCATCCCAGATTCAATGGAAGCTTCGCAAATGAATAATTTGC
JMFF001J17+ CTTCGCAAATGAATAATTTGC
____________________________________________________________
consensus GATTCCCATCATTAATCGCCATCCCAGATTCAATGGAAGCTTCGCAAATGAATAATTTGC
. : . : . : . : . : . :
JMSF039G14+ AACGAATCCAAGTAAAACACCAAAGTTGATAAACACTTCCGGGAAAGAAGTGAGGAAGCC
JMSF012K18+ AAGTTGATAAACACTTCCGGGAAAGAAGTGAGGAAGCC
JMFF031O14+ AAGTTGATAAACACTTCCGGGAAAGAAGTGAGGAAGCC
JMFF001J17+ AACGAATCCAAGTAAAACACCAAAGTTGATAAACACTTCCGGGAAAGAAGTGAGGAAGCC
____________________________________________________________
consensus AACGAATCCAAGTAAAACACCAAAGTTGATAAACACTTCCGGGAAAGAAGTGAGGAAGCC
. : . : . : . : . : . :
JMSF039G14+ ACGGATAGATTCCGGCGCCACCTCGGCGGAGTACACCGGAGCAATCATCAGGGCGTAGCC
JMSF012K18+ ACGGATAGATTCCGGCGCCACCTCGGCGGAGTACACCGGAGCAATCATCAGGGCGTAGCC
JMFF031O14+ ACGGATAGATTCCGGCGCCACCTCGGCGGAGTACACCGGAGCAATCATCAGGGCGTAGCC
JMFF001J17+ ACGGATAGATTCCGGCGCCACCTCGGCGGAGTACACCGGAGCAATCATCAGGGCGTAGCC
____________________________________________________________
consensus ACGGATAGATTCCGGCGCCACCTCGGCGGAGTACACCGGAGCAATCATCAGGGCGTAGCC
. : . : . : . : . : . :
JMSF039G14+ GACGCCGATTCCGGCCACGAAGCGGCCCACCATGAGGAAAGCGTAGTTGGTGGCGAAGCC
JMSF012K18+ GACGCCGATTCCGGCCACGAAGCGGCCCACCATGAGGAAAGCGTAGTTGGTGGCGAAGCC
JMFF031O14+ GACGCCGATTCCGGCCACGAAGCGGCCCACCATGAGGAAAGCGTAGTTGGTGGCGAAGCC
JMFF001J17+ GACGCCGATTCCGGCCACGAAGCGGCCCACCATGAGGAAAGCGTAGTTGGTGGCGAAGCC
____________________________________________________________
consensus GACGCCGATTCCGGCCACGAAGCGGCCCACCATGAGGAAAGCGTAGTTGGTGGCGAAGCC
. : . : . : . : . : . :
JMSF039G14+ CATCAACACCGCTCCGACGAAGAACACGCACCCCGCCACCACGATGGTGTACCGGCGGCC
JMSF012K18+ CATCAACACCGCTCCGACGAAGAACACGCACCCCGCCACCACGATGGTGTACCGGCGGCC
JMFF031O14+ CATCAACACCGCTCCGACGAAGAACACGCACCCCGCCACCACGATGGTGTACCGGCGGCC
JMFF001J17+ CATCAACACCGCTCCGACGAAGAACACGCACCCCGCCACCACGATGGTGTACCGGCGGCC
____________________________________________________________
consensus CATCAACACCGCTCCGACGAAGAACACGCACCCCGCCACCACGATGGTGTACCGGCGGCC
. : . : . : . : . : . :
JMSF039G14+ TATCAAGTCCGACGTCCTCCCCGCCACGGCGGAGCCGACGAGCGAGTATATGTTGATTGT
JMSF012K18+ TATCAAGTCCGACGTCCTCCCCGCCACGGCGGAGCCGACGAGCGAGTATATGTTGATTGT
JMFF031O14+ TATCAAGTCCGACGTCCTCCCCGCCACGGCGGAGCCGACGAGCGAGTATATGTTGATTGT
JMFF001J17+ TATCAAGTCCGACGTCCTCCCCGCCACGGCGGAGCCGACGAGCGAGTATATGTTGATTGT
____________________________________________________________
consensus TATCAAGTCCGACGTCCTCCCCGCCACGGCGGAGCCGACGAGCGAGTATATGTTGATTGT
. : . : . : . : . : . :
JMSF039G14+ TCCGATCAGGAACTCGACTTGGACGTCGGAGATTCCGAGATCTTGCTTGATGTAAATCGA
JMSF012K18+ TCCGATCAGGAACTCGACTTGGACGTCGGAGATTCCGAGATCTTGCTTGATGTAAATCGA
JMFF031O14+ TCCGATCAGGAACTCGACTTGGACGTCGGAGATTCCGAGATCTTGCTTGATGTAAATCGA
JMFF001J17+ TCCGATCAGGAACTCGACTTGGACGTCGGAGATTCCGAGATCTTGCTTGATGTAAATCGA
____________________________________________________________
consensus TCCGATCAGGAACTCGACTTGGACGTCGGAGATTCCGAGATCTTGCTTGATGTAAATCGA
. : . : . : . : . : . :
JMSF039G14+ CGCGCCACTCATCACTCCCGTATCATAGCCAAGTAAAATAGAAGTCATGGAAGCTAAGAG
JMSF012K18+ CGCGCCACTCATCACTCCCGTATCATAGCCAAGTAAAATAGAAGTCATGGAAGCTAAGAG
JMFF031O14+ CGCGCCACTCATCACTCCCGTATCATAGCCAAGTAAAATAGAAGTCATGGAAGCTAAGAG
JMFF001J17+ CGCGCCACTCATCACTCCCGTATCATAGCCAAGTAAAATAGAAGTCATGGAAGCTAAGAG
____________________________________________________________
consensus CGCGCCACTCATCACTCCCGTATCATAGCCAAGTAAAATAGAAGTCATGGAAGCTAAGAG
. : . : . : . : . : . :
JMSF039G14+ AGAGCAGGCCAGGGCGTATTTGTTCCGTTTTGGTTTCTTTGGAGGGCCGAGATCCGCCGG
JMSF012K18+ AGAGCAGGCCAGGGCGTATTTGTTCCGTTTTGGTTTCTTTGGAGGGCCGAGATCCGCCGG
JMFF031O14+ AGAGCAGGCCAGGGCGTATTTGCTCCGTTTTGGTTTCTTTGGAGGGCCGAGATCCGCCGG
JMFF001J17+ AGAGCAGGCCAGGGCGTATTTGTTCCGTTTTGGTTTCTTTGGAGGGCCGAGATCCGCCGG
____________________________________________________________
consensus AGAGCAGGCCAGGGCGTATTTGTTCCGTTTTGGTTTCTTTGGAGGGCCGAGATCCGCCGG
. : . : . : . : . : . :
JMSF039G14+ CAACAATGATGTGGCCGGCGGAGGTTTGGCGGAGTGAGAAGCCATGAGAAGATTGA
JMSF012K18+ CAACAATGATGTGGCCGGCGGAGGTTTGGCGGAGTGAGAAGCCATGAGAAGATTGA
JMFF031O14+ CAACAATGATGTGGCCGGCGGAGGTTTGGCGGAGTGAGAAGCCATGAGAAGATTGA
JMFF001J17+ CAACAATGATGTGGCCGGCGGAGGTTTGGCGGAGTGAGAAGCCATGAGAAGATTGACAAC
____________________________________________________________
consensus CAACAATGATGTGGCCGGCGGAGGTTTGGCGGAGTGAGAAGCCATGAGAAGATTGACAAC