Contig 003041:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP005C12Sequence333003041 (3)
JMCP005G07Sequence289003041 (3)
JMCP018B07Sequence258003041 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP005C12+ AGATTTGCgaaGTTcacTATATAAgacTtAaga
                      ____________________________________________________________
consensus AGATTTGCCTTGTTGTGTATATAACTGTAATCT
 
. : . : . : . : . : . :
rJMCP005G07+ GAAAGCAAAGGTGAATGCATATATTACTGAAGCAAAAGAGCAATAGAGT
rJMCP005C12+ TTTTTTTTTTTGAAAGCAAAGGTGAATGCATATATTACTGAAGCAAAAGAGCAATAGAGT
rJMCP018B07+ GCAAAAGAGCAATAGAGT
                      ____________________________________________________________
consensus TTTTTTTTTTTGAAAGCAAAGGTGAATGCATATATTACTGAAGCAAAAGAGCAATAGAGT
 
. : . : . : . : . : . :
rJMCP005G07+ CAGGGGGGACAGAGTCCCAATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
rJMCP005C12+ CAGGGGGGACAGAGTCCCGATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
rJMCP018B07+ CAGGGGGGACAGAGTCCCAATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
                      ____________________________________________________________
consensus CAGGGGGGACAGAGTCCCAATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
 
. : . : . : . : . : . :
rJMCP005G07+ TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
rJMCP005C12+ TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
rJMCP018B07+ TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
                      ____________________________________________________________
consensus TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
 
. : . : . : . : . : . :
rJMCP005G07+ ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
rJMCP005C12+ ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
rJMCP018B07+ ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
                      ____________________________________________________________
consensus ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
 
. : . : . : . : . : . :
rJMCP005G07+ CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC
rJMCP005C12+ CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC
rJMCP018B07+ CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC
                      ____________________________________________________________
consensus CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC