Contig 003041:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP005C12+                                     AGATTTGCgaaGTTcacTATATAAgacTtAaga
                      ____________________________________________________________
consensus                                        AGATTTGCCTTGTTGTGTATATAACTGTAATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP005G07+                     GAAAGCAAAGGTGAATGCATATATTACTGAAGCAAAAGAGCAATAGAGT
rJMCP005C12+          TTTTTTTTTTTGAAAGCAAAGGTGAATGCATATATTACTGAAGCAAAAGAGCAATAGAGT
rJMCP018B07+                                                    GCAAAAGAGCAATAGAGT
                      ____________________________________________________________
consensus             TTTTTTTTTTTGAAAGCAAAGGTGAATGCATATATTACTGAAGCAAAAGAGCAATAGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP005G07+          CAGGGGGGACAGAGTCCCAATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
rJMCP005C12+          CAGGGGGGACAGAGTCCCGATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
rJMCP018B07+          CAGGGGGGACAGAGTCCCAATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
                      ____________________________________________________________
consensus             CAGGGGGGACAGAGTCCCAATACATAGAGCTAGCCGGAGTGTAGGCAGCTGAAGCAAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP005G07+          TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
rJMCP005C12+          TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
rJMCP018B07+          TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
                      ____________________________________________________________
consensus             TATGAGCTAGAAAATTAGCTGATCTAGGCACTAAATTAATTGAGCAGTAAGGAAACATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP005G07+          ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
rJMCP005C12+          ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
rJMCP018B07+          ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
                      ____________________________________________________________
consensus             ACATAGCTATCCTACACTGATGAACCACTAAACCAACGTAGGAGAAGGTAGTGACTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMCP005G07+          CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC
rJMCP005C12+          CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC
rJMCP018B07+          CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC
                      ____________________________________________________________
consensus             CCGTAGACAAATTGGTACGAAGCTCTGAACAGTTGTTGAAAAGATTTACCAATAAGATCC