Contig 003037:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006A09Sequence600003037 (6)ref|XP_011088786.1|9e-15PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isofo
JMCP008D02Sequence605003037 (6)ref|XP_010089788.1|2e-14Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [Morus notabilis
JMCP009B11Sequence614003037 (6)ref|XP_010089788.1|2e-14Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [Morus notabilis
JMCP010E01Sequence298003037 (6)tpg|DAA36628.1|2e-10TPA: hypothetical protein ZEAMMB73_968947 [Zea mays]
JMCP019D02Sequence317003037 (6)ref|XP_009765388.1|3e-22PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isofo
JMCP020B10Sequence439003037 (6)ref|XP_011088786.1|8e-22PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isofo

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP009B11+ GAAACAGATATAGG
                      ____________________________________________________________
consensus GAAACAGATATAGG
 
. : . : . : . : . : . :
JMCP009B11+ AAAGCAACTTTTGTATGAAGAGTAGAATTTGGTATGCAATGGCGGTTTCTTTGGAGAAAG
JMCP006A09+ GCAACTTaacTtaGAAGAGTAGAATTTGGTATGCAtacGCGGTTTCTaacGAGAAAG
rJMCP008D02+ GCAACTTTTGTATGAAGAGTAGAATTTGGTATGCAATGGCGGTTTCTTTGGAGAAAG
                      ____________________________________________________________
consensus AAAGCAACTTTTGTATGAAGAGTAGAATTTGGTATGCAATGGCGGTTTCTTTGGAGAAAG
 
. : . : . : . : . : . :
JMCP009B11+ AGAGTTTAAATGTGATAGAAATCTCAATTGAAGTGATGCTTCTTCTTAATTGAAAGGATA
JMCP006A09+ AGAGTTTAAATGTGATAGAttagaCAAaTGAAGTGATGCTTCTTCTTAAaacAAAGGATA
rJMCP008D02+ AGAGTTTAAATGTGATAGAAATCTCAATTGAAGTGATGCTTCTTCTTAATTGAAAGGATA
                      ____________________________________________________________
consensus AGAGTTTAAATGTGATAGAAATCTCAATTGAAGTGATGCTTCTTCTTAATTGAAAGGATA
 
. : . : . : . : . : . :
JMCP009B11+ TTGAAGAACAGAATTCTAAAACATGAAATCATGACTGATAAATTGTTTTCATTGTGCTAT
JMCP006A09+ TTGAAGAACAGAATTCTAAAACATGAAATCATGACCGATAAATTGTTTTCATTGTGCTAT
rJMCP008D02+ TTGAAGAACAGAATTCTAAAACATGAAATCATGACTGATAAATTGTTTTCATTGTGCTAT
                      ____________________________________________________________
consensus TTGAAGAACAGAATTCTAAAACATGAAATCATGACTGATAAATTGTTTTCATTGTGCTAT
 
. : . : . : . : . : . :
JMCP009B11+ ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
JMCP006A09+ ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
rJMCP008D02+ ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
                      ____________________________________________________________
consensus ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
 
. : . : . : . : . : . :
JMCP009B11+ GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCTGGGCT
JMCP006A09+ GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCT-GGCT
rJMCP008D02+ GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCTGGGCT
                      ____________________________________________________________
consensus GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCTGGGCT
 
. : . : . : . : . : . :
JMCP009B11+ TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
JMCP006A09+ TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
rJMCP008D02+ TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
                      ____________________________________________________________
consensus TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
 
. : . : . : . : . : . :
JMCP009B11+ TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
JMCP006A09+ TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
JMCP020B10+ AGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
rJMCP019D02+ AGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
rJMCP010E01+ aactgagacaCATGTGGAGGAGGTa
rJMCP008D02+ TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
                      ____________________________________________________________
consensus TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
 
. : . : . : . : . : . :
JMCP009B11+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
JMCP006A09+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
JMCP020B10+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
rJMCP019D02+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
rJMCP010E01+ caataccCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
rJMCP008D02+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
                      ____________________________________________________________
consensus GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
 
. : . : . : . : . : . :
JMCP009B11+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
JMCP006A09+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
JMCP020B10+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
rJMCP019D02+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
rJMCP010E01+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
rJMCP008D02+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
                      ____________________________________________________________
consensus GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
 
. : . : . : . : . : . :
JMCP009B11+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
JMCP006A09+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCCTATGCTTTTGC
JMCP020B10+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
rJMCP019D02+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
rJMCP010E01+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
rJMCP008D02+ TGTAGATATATATATGCCTGTGgtaTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
                      ____________________________________________________________
consensus TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC