| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP006A09 | Sequence | 600 | 003037 (6) | ref|XP_011088786.1| | 9e-15 | PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isofo | |||||
| JMCP008D02 | Sequence | 605 | 003037 (6) | ref|XP_010089788.1| | 2e-14 | Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [Morus notabilis | |||||
| JMCP009B11 | Sequence | 614 | 003037 (6) | ref|XP_010089788.1| | 2e-14 | Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [Morus notabilis | |||||
| JMCP010E01 | Sequence | 298 | 003037 (6) | tpg|DAA36628.1| | 2e-10 | TPA: hypothetical protein ZEAMMB73_968947 [Zea mays] | |||||
| JMCP019D02 | Sequence | 317 | 003037 (6) | ref|XP_009765388.1| | 3e-22 | PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isofo | |||||
| JMCP020B10 | Sequence | 439 | 003037 (6) | ref|XP_011088786.1| | 8e-22 | PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isofo | |||||
This contig is upended
. : . : . : . : . : . :
JMCP009B11+ GAAACAGATATAGG
____________________________________________________________
consensus GAAACAGATATAGG
. : . : . : . : . : . :
JMCP009B11+ AAAGCAACTTTTGTATGAAGAGTAGAATTTGGTATGCAATGGCGGTTTCTTTGGAGAAAG
JMCP006A09+ GCAACTTaacTtaGAAGAGTAGAATTTGGTATGCAtacGCGGTTTCTaacGAGAAAG
rJMCP008D02+ GCAACTTTTGTATGAAGAGTAGAATTTGGTATGCAATGGCGGTTTCTTTGGAGAAAG
____________________________________________________________
consensus AAAGCAACTTTTGTATGAAGAGTAGAATTTGGTATGCAATGGCGGTTTCTTTGGAGAAAG
. : . : . : . : . : . :
JMCP009B11+ AGAGTTTAAATGTGATAGAAATCTCAATTGAAGTGATGCTTCTTCTTAATTGAAAGGATA
JMCP006A09+ AGAGTTTAAATGTGATAGAttagaCAAaTGAAGTGATGCTTCTTCTTAAaacAAAGGATA
rJMCP008D02+ AGAGTTTAAATGTGATAGAAATCTCAATTGAAGTGATGCTTCTTCTTAATTGAAAGGATA
____________________________________________________________
consensus AGAGTTTAAATGTGATAGAAATCTCAATTGAAGTGATGCTTCTTCTTAATTGAAAGGATA
. : . : . : . : . : . :
JMCP009B11+ TTGAAGAACAGAATTCTAAAACATGAAATCATGACTGATAAATTGTTTTCATTGTGCTAT
JMCP006A09+ TTGAAGAACAGAATTCTAAAACATGAAATCATGACCGATAAATTGTTTTCATTGTGCTAT
rJMCP008D02+ TTGAAGAACAGAATTCTAAAACATGAAATCATGACTGATAAATTGTTTTCATTGTGCTAT
____________________________________________________________
consensus TTGAAGAACAGAATTCTAAAACATGAAATCATGACTGATAAATTGTTTTCATTGTGCTAT
. : . : . : . : . : . :
JMCP009B11+ ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
JMCP006A09+ ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
rJMCP008D02+ ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
____________________________________________________________
consensus ATATCCTTTTATGGAGATTTCTTATAACTGCAGACAAAATCAATTTCTCTGTGGAAGGCA
. : . : . : . : . : . :
JMCP009B11+ GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCTGGGCT
JMCP006A09+ GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCT-GGCT
rJMCP008D02+ GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCTGGGCT
____________________________________________________________
consensus GTGATATCCTGCTTTGGAACTGCTTTATGCTGCATAGGTTTGTGAAATGCATTCTGGGCT
. : . : . : . : . : . :
JMCP009B11+ TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
JMCP006A09+ TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
rJMCP008D02+ TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
____________________________________________________________
consensus TGGCATTTTGTCCCGAGACTCCCTGCTAGATTTTGTTGTTGCTGTATTTATCTAAAGTAA
. : . : . : . : . : . :
JMCP009B11+ TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
JMCP006A09+ TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
JMCP020B10+ AGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
rJMCP019D02+ AGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
rJMCP010E01+ aactgagacaCATGTGGAGGAGGTa
rJMCP008D02+ TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
____________________________________________________________
consensus TGCAATTCTATACCATGCAGGTCTTACAATCGTGGTTGACTCTGTCATGTGGAGGAGGTT
. : . : . : . : . : . :
JMCP009B11+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
JMCP006A09+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
JMCP020B10+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
rJMCP019D02+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
rJMCP010E01+ caataccCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
rJMCP008D02+ GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
____________________________________________________________
consensus GTTATGGCCTGAATTTGAGGTTTTCTGGTTCAATTCTGTGTTGAATCGGAGTTCTGAATG
. : . : . : . : . : . :
JMCP009B11+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
JMCP006A09+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
JMCP020B10+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
rJMCP019D02+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
rJMCP010E01+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
rJMCP008D02+ GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
____________________________________________________________
consensus GGGTGTATCCTGGAGGCACCACATATTAATTTGTGCATGCATTTCTTTAAACTATGTACT
. : . : . : . : . : . :
JMCP009B11+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
JMCP006A09+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCCTATGCTTTTGC
JMCP020B10+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
rJMCP019D02+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
rJMCP010E01+ TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
rJMCP008D02+ TGTAGATATATATATGCCTGTGgtaTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC
____________________________________________________________
consensus TGTAGATATATATATGCCTGTGCATTGGCATATATATAGTGTAGTTTCTTTTGCTTTTGC