Contig 003029:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006E10Sequence549003029 (5)ref|XP_009795884.1|3e-46PREDICTED: microtubule-associated protein 70-5-like [Nicotiana sylvestris]
JMCP015D10Sequence545003029 (5)ref|XP_009795884.1|8e-50PREDICTED: microtubule-associated protein 70-5-like [Nicotiana sylvestris]
JMCP015H09Sequence603003029 (5)ref|XP_006352452.1|3e-51PREDICTED: microtubule-associated protein 70-5-like [Solanum tuberosum]
JMCP015H12Sequence536003029 (5)emb|CDP04519.1|1e-46unnamed protein product [Coffea canephora]
JMCP016F08Sequence626003029 (5)ref|XP_006352452.1|8e-53PREDICTED: microtubule-associated protein 70-5-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMCP015H09+                                                  TGTCAGTTTATCAGAGTTCT
rJMCP016F08+                                   GAAATTCCCTGAATCTGTCAGTTTATCAGAGTTCT
                      ____________________________________________________________
consensus                                      GAAATTCCCTGAATCTGTCAGTTTATCAGAGTTCT
 
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rJMCP015H09+          CTTTCATCCCacCATTTTCTTTTTCATCAATCTTGTTTCTGGAATACCACAGGCCATGAT
rJMCP006E10+                                   ATCAATCTTGTTTCTGGAATACCACAGGCCATGAT
rJMCP015H12+                                                CTGGAATACCACAGGCCATGAT
rJMCP016F08+          CTTTCATCCCTGCATTTTCTTTTTCATCAATCTTGTTTCTGGAATACCACAGGCCATGAT
JMCP015D10+                                                                  ATGAT
                      ____________________________________________________________
consensus             CTTTCATCCCTGCATTTTCTTTTTCATCAATCTTGTTTCTGGAATACCACAGGCCATGAT
 
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rJMCP015H09+          GTCTCTTTTTCTGATCATTATATTCACCAGAATTCTCTGAACTACTTTCTTGCTCTGAAG
rJMCP006E10+          GTCTCTTTTTCTGATCATTATATTCACCAGAATTCTCTGAACTACTTTCTTGCTCTGAAG
rJMCP015H12+          GTCTCTTTTTCTGATCATTATATTCACCAGAATTCTCTGAACTACTTTCTTGCTCTGAAG
rJMCP016F08+          GTCTCTTTTTCTGATCATTATATTCACCAGAATTCTCTGAACTACTTTCTTGCTCTGAAG
JMCP015D10+           GTCTCTTTTagactTgtaataATTCACCAGAATagTgacAACTACTTTCTTGCTCTGAAG
                      ____________________________________________________________
consensus             GTCTCTTTTTCTGATCATTATATTCACCAGAATTCTCTGAACTACTTTCTTGCTCTGAAG
 
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rJMCP015H09+          TTGTGTTAACCATGGAGGCTCTTGGCTGTGATGCAGACCTCTTCTTGCTTGACAGAATTC
rJMCP006E10+          TTGTGTTAACCATGGAGGCTCTTGGCTGTGATGCAGACCTCTTCTTGCTTGACAGAATTC
rJMCP015H12+          TTGTGTTAACCATGGAGGCTCTTGGCTGTGATGCAGACCTCTTCTTGCTTGACAGAATTC
rJMCP016F08+          TTGTGTTAACCATGGAGGCTCTTGGCTGTGATGCAGACCTCTTCTTGCTTGACAGAATTC
JMCP015D10+           TTGTGTTAACCATGGAGGCagaaccgTGTGATGCAGACCTCTTCTTGCTTGACAGAATTC
                      ____________________________________________________________
consensus             TTGTGTTAACCATGGAGGCTCTTGGCTGTGATGCAGACCTCTTCTTGCTTGACAGAATTC
 
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rJMCP015H09+          CGAATAAGTGGTTGGCTTTTTCGGGCTTTGAGAATCCACTCAACACTTTAGGATTTACGT
rJMCP006E10+          CGAATAAGTGGTTGGCTTTTTCGGGCTTTGAGAATCCACCCAACACTTTAGGATTTACGT
rJMCP015H12+          CGAATAAGTGGTTGGCTTTTTCGGGCTTTGAGAATCCACTCAACACTTTAGGATTTACGT
rJMCP016F08+          CGAATAAGTGGTTGGCTTTTTCGGGCTTTGAGAATCCACTCAACACTTTAGGATTTACGT
JMCP015D10+           CGAATAAGTGGTTGGCTTTTTCGGGCTTTGAGAATCCACTCAACACTTTAGGATTTACGT
                      ____________________________________________________________
consensus             CGAATAAGTGGTTGGCTTTTTCGGGCTTTGAGAATCCACTCAACACTTTAGGATTTACGT
 
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rJMCP015H09+          TGTTATTGCCTGTCTGTTTCAACCCTTGTTCAAGAGTCTTCAACCTTAACTTCAGCTTGT
rJMCP006E10+          TGTTATTGCCTGTCTGTTTCAACCCTTGTTCAAGAGTCTTCAACCTTAACTTCAGCTTGT
rJMCP015H12+          TGTTATTGCCTGTCTGTTTCAACCCTTGTTCAAGAGTCTTCAACCTTAACTTCAGCTTGT
rJMCP016F08+          TGTTATTGCCTGTCTGTTTCAACCCTTGTTCAAGAGTCTTCAACCTTAACTTCAGCTTGT
JMCP015D10+           TGTTATTGCCTGTCTGTTTCAACCCTTGTTCAAGAGTCTTCAACCTTAACTTCAGCTTGT
                      ____________________________________________________________
consensus             TGTTATTGCCTGTCTGTTTCAACCCTTGTTCAAGAGTCTTCAACCTTAACTTCAGCTTGT
 
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rJMCP015H09+          CTTTCAGCTGTGCTTCTGCCTTTGCTGTTCTCTCTGATATGGCAAGCTTGTCCTTCAACC
rJMCP006E10+          CTTTCAGCTGTGCTTCTGCCTTTGCTGTTCTCTCTGATATGGCAAGCTTGTCCTTCAACC
rJMCP015H12+          CTTTCAGCTGTGCTTCTGCCTTTGCTGTTCTCTCTGATATGGCAAGCTTGTCCTTCAACC
rJMCP016F08+          CTTTCAGCTGTGCTTCTGCCTTTGCTGTTCTCTCTGATATGGCAAGCTTGTCCTTCAACC
JMCP015D10+           CTTTCAGCTGTGCTTCTGCCTTTGCTGTTCTCTCTGATATGGCAAGCTTGTCCTTCAACC
                      ____________________________________________________________
consensus             CTTTCAGCTGTGCTTCTGCCTTTGCTGTTCTCTCTGATATGGCAAGCTTGTCCTTCAACC
 
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rJMCP015H09+          GCTGCATCaCgcggacgAATATgCTTCTCTCTTCTAGCCACTGTTTTACTGGCATAACTT
rJMCP006E10+          GCTGCATCTCCGCCTGCAATATCCTTCTCTCTTCTAGCCACTGTTTTACTGGCATAACTT
rJMCP015H12+          GCTGCATCTCCGCCTGCAATATCCTTCTCTCTTCTAGCCACTGTTTTACTGGCATAACTT
rJMCP016F08+          GCTGCATCTCCGCCTGCAATATCCTTCTCTCTTCTAGCCACTGTTTTACTGGCATAACTT
JMCP015D10+           GCTGCATgaggcggacgAATtagCTTCTCTCTTCTAGCCACTGTTTTACTGGCATAACTT
                      ____________________________________________________________
consensus             GCTGCATCTCCGCCTGCAATATCCTTCTCTCTTCTAGCCACTGTTTTACTGGCATAACTT
 
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rJMCP015H09+          TGTCATTCTCATCTTTCCACTCGTTTGCCACGATAGTTGCCACTCGATTTGCAGACACCT
rJMCP006E10+          TGTCATTCTCATCTTTCCACTCGTTTGCCACGATAGTTGCCACTCGATTTGCAGACACCT
rJMCP015H12+          TGTCATTCTCATCTTTCCACTCGTTTGCCACGATAGTTGCCACTCGATTTGCAGACACCT
rJMCP016F08+          TGTCATTgaCATCTTTCCACTCGTTTGCCACGATAGTTGCCACTCGATTTGCAGACACCT
JMCP015D10+           TcTCATaCTCATCTTTCCACTCGTTTGCCACGATAGTTGCCACTCGATTTGCAGACACCT
                      ____________________________________________________________
consensus             TGTCATTCTCATCTTTCCACTCGTTTGCCACGATAGTTGCCACTCGATTTGCAGACACCT
 
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rJMCP015H09+          TTACTCTTGCCAGTTCTCTTTCCAGTGTCCTCCTCTCTTCTTGTATCTCAGATATCTGTC
rJMCP006E10+          TTACTCTTGCCAGTTCTCTTTCCAGTGTCCTCCTCTCTTCTTGTATCTCAGATATCTGTC
rJMCP015H12+          TTACTCTTGCCAGTTCTCTTTCCAGTGTCCTCCTCTCTTCTTGTATCTCAGATATCTGTC
rJMCP016F08+          TTACTCTTGCCAGTTCTCTTTCCAGTGTCCTCCTCTCTTCTTGTATCTCAGATATCTGTC
JMCP015D10+           TTACTCTTGCCAGTTCTCTTTCCAGTGTCCTCCTCTCTTCTTGTATCTCAGATATCTGTC
                      ____________________________________________________________
consensus             TTACTCTTGCCAGTTCTCTTTCCAGTGTCCTCCTCTCTTCTTGTATCTCAGATATCTGTC
 
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rJMCP015H09+          GTCTATAGTCACGAATAGTGTTGGCAGCTGCACCCCCGGCAAG                 
rJMCP006E10+          GTCTATAGTCACGAATAGTGTTGGCAGCTGCACC                          
rJMCP015H12+          GTCTATAGTCACGAATAGTGTTGGCAGCTGCACC                          
rJMCP016F08+          GTCTATAGTCACGAATAGTGTTGGCAGCTGCACCCCCGGCAAGAATGGCT          
JMCP015D10+           GTCTATAGTCACGAATAGTGTTGGCAGCTGCACCCCCGGCAAGAATGGCTACTCTGCGTT
                      ____________________________________________________________
consensus             GTCTATAGTCACGAATAGTGTTGGCAGCTGCACCCCCGGCAAGAATGGCTACTCTGCGTT