Contig 003027:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP006A03Sequence244003027 (4)ref|XP_009619449.1|1e-04PREDICTED: subtilisin-like protease isoform X1 [Nicotiana tomentosiformis]
JMCP010C07Sequence179003027 (4)ref|XP_009600483.1|3e-04PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT5.3 [Nicotiana tome
JMCP010C09Sequence157003027 (4)
JMCP016E04Sequence182003027 (4)ref|XP_009600483.1|3e-04PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT5.3 [Nicotiana tome

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP006A03+ CTTT
                      ____________________________________________________________
consensus CTTT
 
. : . : . : . : . : . :
rJMCP010C07+ CATCAAAACATGTTTGATTaTCA
rJMCP016E04+ CATCAAAACATGTTTGATTTTCA
rJMCP010C09+ CATCAAAACATGTTTGATTTTCA
JMCP006A03+ TTTTTTAAATGCAACCATAAAAAAAAACTTTATTCAACATCAAAACATGTTTGATTTTCA
                      ____________________________________________________________
consensus TTTTTTAAATGCAACCATAAAAAAAAACTTTATTCAACATCAAAACATGTTTGATTTTCA
 
. : . : . : . : . : . :
rJMCP010C07+ TAgacGTCTGCCTCAAGTTAGTCACATGTCTAACAATTTGTCGCTTTAACTGATTGACTC
rJMCP016E04+ TACTGGTCTGCCTCAAGTTAGTCACATGTCTAACAATTTGTCGCTTTAACTGATTGACTC
rJMCP010C09+ TACTGGTCTGCCTCAAGTTAGTCACATGTCTAACAATTTGTCGCTTTAACTGATTGACTC
JMCP006A03+ TACTGGTCTGCCTCAAGTTAGTCACATGTCTAACAATTTGTCGCTTTAACTGATTGACTC
                      ____________________________________________________________
consensus TACTGGTCTGCCTCAAGTTAGTCACATGTCTAACAATTTGTCGCTTTAACTGATTGACTC
 
. : . : . : . : . : . :
rJMCP010C07+ CCTTACTCAACATTTACAACGATTGGACTTCTAACTTTATATTTTCCGCTAGTCCATGTA
rJMCP016E04+ CCTTACTCAACATTTACAACGATTGGACTTCTAACTTTATATTTTCCGCTAGTCCATGTA
rJMCP010C09+ CCTTACTCAACATTTACAACGATTGGACTTCTAACTTTATATTTTCCGCTAGTCCATGTA
JMCP006A03+ CCTTACTCAACATTTACAACGATTGGACTTCTAACTTTATATTTTCCGCTAGTCCATGTA
                      ____________________________________________________________
consensus CCTTACTCAACATTTACAACGATTGGACTTCTAACTTTATATTTTCCGCTAGTCCATGTA
 
. : . : . : . : . : . :
rJMCP010C07+ ATTGACCCAAATATGTTTGTCTCAAGGGATGATGAA
rJMCP016E04+ ATTGACCCAAATATGTTTGTCTCAAGGGATGATGAA
rJMCP010C09+ ATTGACCCAAA
JMCP006A03+ ATTGACCCAAATATGTTTGTCTCAAGGGATGATGAAGCCGTAAAGGTCACTCTGCGTTGA
                      ____________________________________________________________
consensus ATTGACCCAAATATGTTTGTCTCAAGGGATGATGAAGCCGTAAAGGTCACTCTGCGTTGA