Contig 003022:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF052M21-                                               TTTTGCTATCATCTATTGAAGTT
                      ____________________________________________________________
consensus                                                  TTTTGCTATCATCTATTGAAGTT
 
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rJMSF052M21-          ATATGGTCCAGGTTGGTTTCCTGTACAAGGGGGAAGACCACAGTCCCACAGCTGCAACCT
                      ____________________________________________________________
consensus             ATATGGTCCAGGTTGGTTTCCTGTACAAGGGGGAAGACCACAGTCCCACAGCTGCAACCT
 
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rJMSF052M21-          ATGTAGATACAACATGATACATTGCGGGTTTCGTGGGCCTAGCTAACACTGAGAGGGATT
                      ____________________________________________________________
consensus             ATGTAGATACAACATGATACATTGCGGGTTTCGTGGGCCTAGCTAACACTGAGAGGGATT
 
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rJMSF052M21-          GTTTCTCGGGGAAAAATATGGAAGCTCAGAGCCGACCTGCTCGAATGTCTCTGTCGATGT
                      ____________________________________________________________
consensus             GTTTCTCGGGGAAAAATATGGAAGCTCAGAGCCGACCTGCTCGAATGTCTCTGTCGATGT
 
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JMSF052M21+                                           AAATCCTCGTGGAATATAGAGTATGCAC
rJMSF052M21-          GGTCAGCATTAAGAGTTCCGGGAAGCTCTCTGAAATCCTCGTTGAATATAGAGTATGCAC
                      ____________________________________________________________
consensus             GGTCAGCATTAAGAGTTCCGGGAAGCTCTCTGAAATCCTCGTTGAATATAGAGTATGCAC
 
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JMSF052M21+           TGAGTTCCCCCTGCTGCCGATGTCCAAGATTATAGAATATAATCCCAAATCCTGTCCCGA
rJMSF052M21-          TGAGTTCCCCCTGCTGCCGATGTCCAAGATTATAGAATATAATCCCAAATCCTGTCCCGA
                      ____________________________________________________________
consensus             TGAGTTCCCCCTGCTGCCGATGTCCAAGATTATAGAATATAATCCCAAATCCTGTCCCGA
 
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JMSF052M21+           GTATGTATAATGGTCCAATGCCAAATCTATGGGCAACGGGTGCCAGAATAAACCACATGA
rJMSF052M21-          GTATGTATAATGGTCCAATGCCAAATCTATGGGCAACGGGTGCCAGAATAAACCACATGA
                      ____________________________________________________________
consensus             GTATGTATAATGGTCCAATGCCAAATCTATGGGCAACGGGTGCCAGAATAAACCACATGA
 
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JMSF052M21+           CAATAATAGCCCACATTTTACAACTGATTGAGAAAATTGCCATCAAAAGCATATCCGGAA
rJMSF052M21-          CAATAATAGCCCACATTTTACAACTGATTGAGAAAATTGCCATCAAAAGCATATCCGGAA
                      ____________________________________________________________
consensus             CAATAATAGCCCACATTTTACAACTGATTGAGAAAATTGCCATCAAAAGCATATCCGGAA
 
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JMSF052M21+           GCTTCAATTTGTCGCGTAATATAGAGAAAAGCCTCATTTTCCACCTACTACTTGATTGCG
rJMSF052M21-          GCTTCAATTTGTCGCGTAATATAGAGAAAAGCCTCATTTTCCACCTACTACTTGATTGCG
                      ____________________________________________________________
consensus             GCTTCAATTTGTCGCGTAATATAGAGAAAAGCCTCATTTTCCACCTACTACTTGATTGCG
 
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JMSF052M21+           GTAGATGAAACTTCAGATCATCATCATCATCGTCAAATTCATCCCGAATGTGCTTGGGGG
rJMSF052M21-          GTAGATGAAACTTCAGATCATCATCATCATCGTCAAATTCATCCCGAATGTGCTTGGGGG
                      ____________________________________________________________
consensus             GTAGATGAAACTTCAGATCATCATCATCATCGTCAAATTCATCCCGAATGTGCTTGGGGG
 
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JMSF052M21+           GAGACTTTGGTTTTACAGCAATGATCAAAGAATCTCCATTGTTGAATTGAATTGTTTGAT
rJMSF052M21-          GAGACTTTGGTTTTACAGCAATGATCAAAGAATCTCCATTGTTGAATTGAATTGTTTGAT
                      ____________________________________________________________
consensus             GAGACTTTGGTTTTACAGCAATGATCAAAGAATCTCCATTGTTGAATTGAATTGTTTGAT
 
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JMSF052M21+           CATCCCCATTTTGGGTGTCATGCAATACTCTTCCTTGCAAAACAAGCTTCAAAGCTTCAA
rJMSF052M21-          CATCCCCATTTTGGGTGTCATGCAATACTCTTCCTTGCAAAACAAGCTTCAAAGCTTCAA
                      ____________________________________________________________
consensus             CATCCCCATTTTGGGTGTCATGCAATACTCTTCCTTGCAAAACAAGCTTCAAAGCTTCAA
 
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JMSF052M21+           TAGGTAAATGGCGATTTTTGGCAATCATTTTTCTCAAATCATGAACTTTGATGGAAGAAG
rJMSF052M21-          TAGGTAAATGGCGATTTTTGGCAATCATTTTTCTCAAATCATGAACTTTGATGGAAGAAG
                      ____________________________________________________________
consensus             TAGGTAAATGGCGATTTTTGGCAATCATTTTTCTCAAATCATGAACTTTGATGGAAGAAG
 
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JMSF052M21+           GAACGAGGAGGCGAGACGGTGGAGATGGGCCGATTACTCTCAAATTGATTTCTACCATCT
rJMSF052M21-          GAACGAGGAGGCGAGACGGTGGAGATGGGCCGATTACTCTCAAATTGATTTCTACCATCT
                      ____________________________________________________________
consensus             GAACGAGGAGGCGAGACGGTGGAGATGGGCCGATTACTCTCAAATTGATTTCTACCATCT
 
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JMSF052M21+           TCTTCTTCTCCTCCTCCCCCAACGCATCGCTAACAAGATCAAGCTCGATTTCACGTCCCA
rJMSF052M21-          TCTTCTTCTCCTCCTCCCCCAACGCATCGCTAACAAGATCAAGCTCGATTTCACGTCCCA
                      ____________________________________________________________
consensus             TCTTCTTCTCCTCCTCCCCCAACGCATCGCTAACAAGATCAAGCTCGATTTCACGTCCCA
 
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JMSF052M21+           TTGTTGAATTCAGAGAAGTCTCTCTCTCTCTCCCTCTCTTTCTCGCTCTCTACCTCCCTC
rJMSF052M21-          TTGTTGAATTCAGAGAAGTCTCTCTCTCTCTCCCTCTCTTTCTCGNTCTCTACCTCCCTC
                      ____________________________________________________________
consensus             TTGTTGAATTCAGAGAAGTCTCTCTCTCTCTCCCTCTCTTTCTCGCTCTCTACCTCCCTC