| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF021H03 | Sequence | 671 | 013443 (3) | ref|XP_007215361.1| | 1e-16 | hypothetical protein PRUPE_ppa005564mg [Prunus persica] gb|EMJ16560.1| hypotheti | 770 | 003017 (3) | ref|XP_007215361.1| | 7e-99 | hypothetical protein PRUPE_ppa005564mg [Prunus persica] gb|EMJ16560.1| hypotheti |
| JMSF033H03 | Sequence | 687 | 013443 (3) | ref|XP_004302377.1| | 1e-09 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Fragari | 655 | 003017 (3) | ref|XP_007215361.1| | 2e-79 | hypothetical protein PRUPE_ppa005564mg [Prunus persica] gb|EMJ16560.1| hypotheti |
| JMSF052F02 | Sequence | 642 | 013443 (3) | 886 | 003017 (3) | ref|XP_007215361.1| | 2e-06 | hypothetical protein PRUPE_ppa005564mg [Prunus persica] gb|EMJ16560.1| hypotheti | |||
This contig is upended
. : . : . : . : . : . :
rJMSF021H03+ AAGAAGGGCG
____________________________________________________________
consensus AAGAAGGGCG
. : . : . : . : . : . :
rJMSF021H03+ ATGAAGGGAGAAGAAACTACCAAGTGTCCGAGATTTTCCGGCGGACGTTATTCCCCCGGA
____________________________________________________________
consensus ATGAAGGGAGAAGAAACTACCAAGTGTCCGAGATTTTCCGGCGGACGTTATTCCCCCGGA
. : . : . : . : . : . :
rJMSF033H03+ CCTCACAATCCTGGGACACGACCGGA
rJMSF021H03+ GCCCTGAAGACGGCGACAGTAATCCTCCTCATCCCCTCACAATCCTGGGACACGACCGGA
____________________________________________________________
consensus GCCCTGAAGACGGCGACAGTAATCCTCCTCATCCCCTCACAATCCTGGGACACGACCGGA
. : . : . : . : . : . :
rJMSF033H03+ TATTCTGGTTCGGCGATCTCAACTACAGATTATACCTGGAAGACAATTTAGCCCGGCAGT
rJMSF021H03+ TATTCTGGTTCGGCGATCTCAACTACAGATTATACCTGGAAGACAATTTAGCCCGGCAGT
____________________________________________________________
consensus TATTCTGGTTCGGCGATCTCAACTACAGATTATACCTGGAAGACAATTTAGCCCGGCAGT
. : . : . : . : . : . :
rJMSF033H03+ TGATAGTGAAGCACGACTGGAACTCACTGCACAAGTTCGATCAGCTCCGGCGGGAGCAGG
rJMSF021H03+ TGATAGTGAAGCACGACTGGAACTCACTGCACAAGTTCGATCAGCTCCGGCGGGAGCAGG
____________________________________________________________
consensus TGATAGTGAAGCACGACTGGAACTCACTGCACAAGTTCGATCAGCTCCGGCGGGAGCAGG
. : . : . : . : . : . :
rJMSF033H03+ AAGACGGCGGCGTGTTTGAAGGTTGGCGGGAAGGAAACATAGAATTCGCGCCCACATACA
rJMSF021H03+ AAGACGGCGGCGTGTTTGAAGGTTGGCGGGAAGGAAACATAGAATTCGCGCCCACATACA
____________________________________________________________
consensus AAGACGGCGGCGTGTTTGAAGGTTGGCGGGAAGGAAACATAGAATTCGCGCCCACATACA
. : . : . : . : . : . :
rJMSF033H03+ AGTACTCTTCTTCTAACGCAAATATATATTCCGGCGGCCTTCCAAATGCAGCCGGAGAGA
rJMSF021H03+ AGTACTCTTCTTCTAACGCAAATATATATTCCGGCGGCCTTCCAAATGCAGCCGGAGAGA
____________________________________________________________
consensus AGTACTCTTCTTCTAACGCAAATATATATTCCGGCGGCCTTCCAAATGCAGCCGGAGAGA
. : . : . : . : . : . :
rJMSF033H03+ AGCAAAGAACCCCCGCATGGTGTGACAGGATTCTATGGTATGGCAAGGGAATTCATCAGC
rJMSF021H03+ AGCAAAGAACCCCCGCATGGTGTGACAGGATTCTATGGTATGGCAAGGGAATTCATCAGC
____________________________________________________________
consensus AGCAAAGAACCCCCGCATGGTGTGACAGGATTCTATGGTATGGCAAGGGAATTCATCAGC
. : . : . : . : . : . :
rJMSF033H03+ TATCCTATCTCCGGAGCGAAAGCAAATTCTCAGATCATCGTCCTGTCTCTGCTCTTTTCT
rJMSF021H03+ TATCCTATCTCCGGAGCGAAAGCAAATTCTCAGATCATCGTCCTGTCTCTGCTCTTTTCT
rJMSF052F02+ AGCGAAAGCAAATTCTCAGATCATCGTCCTGTCTCTGCTCTTTTCT
____________________________________________________________
consensus TATCCTATCTCCGGAGCGAAAGCAAATTCTCAGATCATCGTCCTGTCTCTGCTCTTTTCT
. : . : . : . : . : . :
rJMSF033H03+ GCACGCAGGTTGAAGCTCTAAACAGCAATAAAATCCCAGGCACAACTGCAGTGGAAAGGG
rJMSF021H03+ GCACGCAGGTTGAAGCTCTAAACAGCAATAAAATCCCAGGCACAACTGCAGTGGAAAGGG
rJMSF052F02+ GCACGCAGGTTGAAGCTCTAAACAGCAATAAAATCCCAGGCACAACTGCAGTGGAAAGGG
____________________________________________________________
consensus GCACGCAGGTTGAAGCTCTAAACAGCAATAAAATCCCAGGCACAACTGCAGTGGAAAGGG
. : . : . : . : . : . :
rJMSF033H03+ CCGAGGAAGAGGTTACTCCTACGTTGTTATCATTGATTGTAAAAGATATAGAGACATCAC
rJMSF021H03+ CCGAGGAAGAGGTTACTCCTACGTTGTTATCATTGATTGTAAAAGATATAGAGACATCAC
rJMSF052F02+ CCGAGGAAGAGGTTACTCCTACGTTGTTATCATTGATTGTAAAAGATATAGAGACATCAC
____________________________________________________________
consensus CCGAGGAAGAGGTTACTCCTACGTTGTTATCATTGATTGTAAAAGATATAGAGACATCAC
. : . : . : . : . : . :
rJMSF033H03+ CAACACATAAGCAAACTTGTAGCTAGGTTAGATCATATCACAGTTAAATTTAGAAGCTGA
rJMSF021H03+ CAACACATAAGCAAACTTGTAGCTAGGTTAGATCATATCACAGTTAAATTTAGAAGCTGA
rJMSF052F02+ CAACACATAAGCAAACTTGTAGCTAGGTTAGATCATATCACAGTTAAATTTAGAAGCTGA
____________________________________________________________
consensus CAACACATAAGCAAACTTGTAGCTAGGTTAGATCATATCACAGTTAAATTTAGAAGCTGA
. : . : . : . : . : . :
rJMSF033H03+ TGAGAGTGGGATATATAGATTTCTGTTTTCTGTGTAGTCTAAGTGTAATTGGCTTGTAAA
rJMSF021H03+ TGAGAGTGGGATATATAGATTTCTGTTTTCTGTGTAGTCTAAGTGTAATTGGCTTGTAAA
rJMSF052F02+ TGAGAGTGGGATATATAGATTTCTGTTTTCTGTGTAGTCTAAGTGTAATTGGCTTGTAAA
____________________________________________________________
consensus TGAGAGTGGGATATATAGATTTCTGTTTTCTGTGTAGTCTAAGTGTAATTGGCTTGTAAA
. : . : . : . : . : . :
rJMSF033H03+ TTTAGGCCCTGTTAAGT
rJMSF021H03+ TTTAGGCCCTGTTAAGTTGGACCTCCAGATTGTTTGTTTA
rJMSF052F02+ TTTAGGCCCTGTTAAGTTGGACCTCCAGATTGTTTGTTTATTGGGCCTGGTATACTAACC
____________________________________________________________
consensus TTTAGGCCCTGTTAAGTTGGACCTCCAGATTGTTTGTTTATTGGGCCTGGTATACTAACC
. : . : . : . : . : . :
rJMSF052F02+ CAAGGAATTTTGTGCATTAAGTAAACAGAAAATGGGCAATTGTGTAGTGTGTAGATGTAG
____________________________________________________________
consensus CAAGGAATTTTGTGCATTAAGTAAACAGAAAATGGGCAATTGTGTAGTGTGTAGATGTAG
. : . : . : . : . : . :
rJMSF052F02+ CAGCAGAAAAGACATGAAAAAAGAAAATTTGTGAAGCATAGAGTGATACCAGAATCCAAA
____________________________________________________________
consensus CAGCAGAAAAGACATGAAAAAAGAAAATTTGTGAAGCATAGAGTGATACCAGAATCCAAA
. : . : . : . : . : . :
rJMSF052F02+ CAAGACAAAAGAGTAGAGGGATTTGAAGATCCGAAATGACAACCAAAGAGACAGACACCC
____________________________________________________________
consensus CAAGACAAAAGAGTAGAGGGATTTGAAGATCCGAAATGACAACCAAAGAGACAGACACCC
. : . : . : . : . : . :
rJMSF052F02+ ACCTTGTATGTGCTATCACCTCAAACAGTAGTGTCGTCTTAGTCAAATCTTCTGCACAGG
____________________________________________________________
consensus ACCTTGTATGTGCTATCACCTCAAACAGTAGTGTCGTCTTAGTCAAATCTTCTGCACAGG
. : . : . : . : . : . :
rJMSF052F02+ CTGTGACAAAAAAAGAATAACGACAAGATGCCATCTCTGATTAGTGCTAATCACCTCAGC
____________________________________________________________
consensus CTGTGACAAAAAAAGAATAACGACAAGATGCCATCTCTGATTAGTGCTAATCACCTCAGC
. : . : . : . : . : . :
rJMSF052F02+ ATGGTTAATCATGCATGTTTGATGTTAATGACCTTGTAATTTGGATGTCCAAAACCAAGT
____________________________________________________________
consensus ATGGTTAATCATGCATGTTTGATGTTAATGACCTTGTAATTTGGATGTCCAAAACCAAGT
. : . : . : . : . : . :
rJMSF052F02+ TATCCTGTCCACAAAATGTGACCCTCAACCCCATATTTTGCCCTATGTGTTCTTTTATCT
____________________________________________________________
consensus TATCCTGTCCACAAAATGTGACCCTCAACCCCATATTTTGCCCTATGTGTTCTTTTATCT
. : . : . : . : . : . :
rJMSF052F02+ TACCATCCTTACCTAACACACATTTGCAATTGTAATCACTCATGTTTGATGTTAAGAACC
____________________________________________________________
consensus TACCATCCTTACCTAACACACATTTGCAATTGTAATCACTCATGTTTGATGTTAAGAACC
. : . : . : . : . : . :
rJMSF052F02+ TTGTAATTTAGTGAGATCAGATTAATTACATGTCCAGAAACCTTGTAATTTAGTCGGATT
____________________________________________________________
consensus TTGTAATTTAGTGAGATCAGATTAATTACATGTCCAGAAACCTTGTAATTTAGTCGGATT