Contig 003014:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF031J14+                                                                  TCAA
                      ____________________________________________________________
consensus                                                                     TCAA
 
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rJMSF031J14+          CTCAGCAAATTTGCGGCGAAAGGGTTTAACGCGACGGAGATGGTGGCCCTGTTAGGTTCA
rJMSF051N20+                                   TTAACGCGACGGAGATGGTGGCCCTGTTAGGTTCA
                      ____________________________________________________________
consensus             CTCAGCAAATTTGCGGCGAAAGGGTTTAACGCGACGGAGATGGTGGCCCTGTTAGGTTCA
 
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rJMSF031J14+          CATACAATCGGGTTTGCGAGATGTCCGCTTTTGTGTATTAGCGCTTTCATTAATCCGGCT
rJMSF051N20+          CATACAATCGGGTTTGCGAGATGTCCGCTTTTGTGTATTAGCGCTTTCATTAATCCGGCT
                      ____________________________________________________________
consensus             CATACAATCGGGTTTGCGAGATGTCCGCTTTTGTGTATTAGCGCTTTCATTAATCCGGCT
 
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rJMSF031J14+          CGGGTCTCCACTCTGAATTGCAACTGCTCGGGAACTGTGAACAGCACCGGGTTGGTGGGC
rJMSF051N20+          CGGGTCTCCACTCTGAATTGCAACTGCTCGGGAACTGTGAACAGCACCGGGTTGGTGGGC
                      ____________________________________________________________
consensus             CGGGTCTCCACTCTGAATTGCAACTGCTCGGGAACTGTGAACAGCACCGGGTTGGTGGGC
 
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rJMSF031J14+          CTGGACCCCACTCCGACAACGTGGGACCAACGCTATTTCTCCGACGTCGTTAACGGTCAA
rJMSF051N20+          CTGGACCCCACTCCGACAACGTGGGACCAACGCTATTTCTCCGACGTCGTTAACGGTCAA
                      ____________________________________________________________
consensus             CTGGACCCCACTCCGACAACGTGGGACCAACGCTATTTCTCCGACGTCGTTAACGGTCAA
 
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rJMSF031J14+          GGCCTTCTGTTTTCCGACAATGAGCTGTTGAAAGGCAACACCACCAACGCCGCCGTGAGG
rJMSF051N20+          GGCCTTCTGTTTTCCGACAATGAGCTGTTGAAAGGCAACACCACCAACGCCGCCGTGAGG
                      ____________________________________________________________
consensus             GGCCTTCTGTTTTCCGACAATGAGCTGTTGAAAGGCAACACCACCAACGCCGCCGTGAGG
 
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rJMSF031J14+          AGGTACAGGGACGCCATGGGTGCTTTCCTCAACGACTTCGCCGCCGCCATGGTGAAGATG
rJMSF051N20+          AGGTACAGGGACGCCATGGGTGCTTTCCTCAACGACTTCGCCGCCGCCATGGTGAAGATG
                      ____________________________________________________________
consensus             AGGTACAGGGACGCCATGGGTGCTTTCCTCAACGACTTCGCCGCCGCCATGGTGAAGATG
 
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rJMSF031J14+          AGCAACCTGCCACCGTCCCCCGGAGTGGCGCTCGAAATCCGCGACGTTTGCAGCAGGGTG
rJMSF051N20+          AGCAACCTGCCACCGTCCCCCGGAGTGGCGCTCGAAATCCGCGACGTTTGCAGCAGGGTG
                      ____________________________________________________________
consensus             AGCAACCTGCCACCGTCCCCCGGAGTGGCGCTCGAAATCCGCGACGTTTGCAGCAGGGTG
 
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rJMSF031J14+          AATGCCAACTCAGTTGCATCCATGTGAAGAATTGAGATTCTTCTGAAATAATCTTATTTC
rJMSF051N20+          AATGCCAACTCAGTTGCATCCATGTGAAGAATTGAGATTCTTCTGAAATAATCTTATTTC
                      ____________________________________________________________
consensus             AATGCCAACTCAGTTGCATCCATGTGAAGAATTGAGATTCTTCTGAAATAATCTTATTTC
 
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rJMSF031J14+          ACCCGTGGTGAATTGGAGAATCTTAATATATCAAAAAATAAGAAGATGAAGAAAAAAGAA
rJMSF051N20+          ACCCGTGGTGAATTGGAGAATCTTAATATATCAAAAAATAAGAAGATGAAGAAAAAAGAA
                      ____________________________________________________________
consensus             ACCCGTGGTGAATTGGAGAATCTTAATATATCAAAAAATAAGAAGATGAAGAAAAAAGAA
 
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rJMSF031J14+          GTTGCTCTCTGTTTTCGTTTTAGTTTTGGCGACCCAGATCGATATAACGATCTGATCTAC
rJMSF051N20+          GTTGCTCTCTGTTTTCGTTTTAGTTTTGGCGACCCAGATCGATATAACGATCTGATCTAC
                      ____________________________________________________________
consensus             GTTGCTCTCTGTTTTCGTTTTAGTTTTGGCGACCCAGATCGATATAACGATCTGATCTAC
 
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rJMSF031J14+          CCAACTTATTTGACTGTACTACGTTGTTGTTATTATGATCATCAAAATGTGAGATGCTAT
rJMSF051N20+          CCAACTTATTTGACTGTACTACGTTGTTGTTATTATGATCATCAAAATGTGAGATGCTAT
                      ____________________________________________________________
consensus             CCAACTTATTTGACTGTACTACGTTGTTGTTATTATGATCATCAAAATGTGAGATGCTAT
 
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rJMSF031J14+          ATGCTCCTAAAAAGTAGTGTACTTACTCCATATAT                         
rJMSF051N20+          ATGCTCCTAAAAAGTAGTGTACTTACTCCATATATGATATATCCTTCTCCCATATATGAT
                      ____________________________________________________________
consensus             ATGCTCCTAAAAAGTAGTGTACTTACTCCATATATGATATATCCTTCTCCCATATATGAT