Contig 003011:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF041K09+                                                                    GC
                      ____________________________________________________________
consensus                                                                       GC
 
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rJMSF041K09+          GACANTGGCCCGACAATATGTCCGCAGTGTGATTTCATCTGTTCAAACGGGTTTGCAATG
                      ____________________________________________________________
consensus             GACANTGGCCCGACAATATGTCCGCAGTGTGATTTCATCTGTTCAAACGGGTTTGCAATG
 
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rJMSF041K09+          GCGATATCTCCCATCGGGATCGGGTCCTGGTCTCGGCCCAAAGTTGTCCGCCATCTCCCC
rJMSF050F19+                          GGATCGGGTCCTAGTCTCGGCCCAAAGTTGTCCGCCATCTCCCC
                      ____________________________________________________________
consensus             GCGATATCTCCCATCGGGATCGGGTCCTGGTCTCGGCCCAAAGTTGTCCGCCATCTCCCC
 
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rJMSF041K09+          AGAAGCTCNTCCGCTGGCTCAGTGGATCTGCCAGAGCTATAGTTACCACATGGGAGCGGA
rJMSF050F19+          AGAAGCTCTTCCGCTGGCTCAGTGGATCTGCCAGAGCTATAGTTACCACATGGGAGCGGA
                      ____________________________________________________________
consensus             AGAAGCTCTTCCGCTGGCTCAGTGGATCTGCCAGAGCTATAGTTACCACATGGGAGCGGA
 
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rJMSF041K09+          GTTGCTTGGTGNCGATTCTATGGGTGGTGAATCCGTGTTGAAGAATCTCTGGAACCATCA
rJMSF050F19+          GTTGCTTGGTGGCGATTCTATGGGTGGTGAATCCGTGTTGAAGAATCTCTGGAACCATCA
                      ____________________________________________________________
consensus             GTTGCTTGGTGGCGATTCTATGGGTGGTGAATCCGTGTTGAAGAATCTCTGGAACCATCA
 
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rJMSF041K09+          TGATGCCATTTTGTGCTGCTCGGTAAAGTCGCTGCCGGTTTTCATATTTGCCAACAAGGC
rJMSF050F19+          TGATGCCATTTTGTGCTGCTCGGTAAAGTCGCTGCCGGTTTTCATATTTGCCAACAAGGC
                      ____________________________________________________________
consensus             TGATGCCATTTTGTGCTGCTCGGTAAAGTCGCTGCCGGTTTTCATATTTGCCAACAAGGC
 
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rJMSF041K09+          TGGGCTTGACATGTTGGAGACAACATTAGTGGGCTTACAAGACATTGCTTTAGATAAAAT
rJMSF050F19+          TGGGCTTGACATGTTGGAGACAACATTAGTGGGCTTACAAGACATTGCTTTAGATAAAAT
                      ____________________________________________________________
consensus             TGGGCTTGACATGTTGGAGACAACATTAGTGGGCTTACAAGACATTGCTTTAGATAAAAT
 
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rJMSF041K09+          ATTTGACGATTCTGGACGCAAGGCGTTGTATTCTGAACTTGCGAAAATCATGCAGCAGGG
rJMSF050F19+          ATTTGACGATTCTGGACGCAAGGCGTTGTATTCTGAACTTGCGAAAATCATGCAGCAGGG
                      ____________________________________________________________
consensus             ATTTGACGATTCTGGACGCAAGGCGTTGTATTCTGAACTTGCGAAAATCATGCAGCAGGG
 
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rJMSF041K09+          CTATGCATACATGCCGGGTGGGATCTGCATGTCAGCAATGGGGCGACATGTTTCGTACGA
rJMSF050F19+          CTATGCATACATGCCGGGTGGGATCTGCATGTCAGCAATGGGGCGACATGTTTCGTACGA
                      ____________________________________________________________
consensus             CTATGCATACATGCCGGGTGGGATCTGCATGTCAGCAATGGGGCGACATGTTTCGTACGA
 
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rJMSF041K09+          GCAGGCGATCGCGTGGAAAGTCCTCTTGGACGATGAAAACACCGTTCACTGTTTGGCGTT
rJMSF050F19+          GCAGGCGATCGCGTGGAAAGTCCTCTTGGACGATGAAAACACCGTTCACTGTTTGGCGTT
                      ____________________________________________________________
consensus             GCAGGCGATCGCGTGGAAAGTCCTCTTGGACGATGAAAACACCGTTCACTGTTTGGCGTT
 
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rJMSF041K09+          CTCGTTTATAAACTGGTCGTTTGTGTAAGTCTGTCCCGATGCCCGGGAGGAGGGAGGGGA
rJMSF050F19+          CTCGTTTATAAACTGGTCGTTTGTGTAAGTCTGTCCCGATGCCCGGGAGGAGGGAGGGGA
                      ____________________________________________________________
consensus             CTCGTTTATAAACTGGTCGTTTGTGTAAGTCTGTCCCGATGCCCGGGAGGAGGGAGGGGA
 
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rJMSF041K09+          AACCAGGTTTNGCTTAGAGGAAGTTTNGTAATGGTCTAAAACAGCAGCCAAATATTTTCA
rJMSF050F19+          AACCAGGTTTTGCTTAGAGGAAGTTTTGTAATGGTCTAAAACAGCAGCCAAATATTTTCA
                      ____________________________________________________________
consensus             AACCAGGTTTTGCTTAGAGGAAGTTTTGTAATGGTCTAAAACAGCAGCCAAATATTTTCA
 
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rJMSF041K09+          CTGTGGTTAGATTTGGTGTATGCTTCTGATATTTGTAAANGCTGCCAGTGTAGCNTTTTT
rJMSF050F19+          -TGTGGTTAGATTTGGTGTATGCTTCTGATATTTGTAAATGCTGCCAGTGTAGCTTTTTT
                      ____________________________________________________________
consensus             CTGTGGTTAGATTTGGTGTATGCTTCTGATATTTGTAAATGCTGCCAGTGTAGCTTTTTT
 
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rJMSF041K09+          ACATTTTATTTTTAGAGTTTGGTTCTTTGATGAGGCCAGGCCAAAACATTT         
rJMSF050F19+          ACATTTTATTTTTAGAGTTTGGTTCTTTGATGAGGCCAGGCCAAAACATTTTCTGCTGCT
                      ____________________________________________________________
consensus             ACATTTTATTTTTAGAGTTTGGTTCTTTGATGAGGCCAGGCCAAAACATTTTCTGCTGCT