Contig 003009:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN017D20Sequence499003009 (5)ref|XP_002262619.1|1e-31PREDICTED: ABC transporter G family member 11 [Vitis vinifera] emb|CBI26391.3| u
JMSF003N17Sequence288001981 (9)666003009 (5)ref|XP_008245603.1|3e-95PREDICTED: ABC transporter G family member 11 [Prunus mume]
JMSF030M11Sequence681001981 (9)ref|XP_009602146.1|7e-40PREDICTED: ABC transporter G family member 11 [Nicotiana tomentosiformis]769003009 (5)ref|XP_008245603.1|6e-97PREDICTED: ABC transporter G family member 11 [Prunus mume]
JMSF036P18Sequence679001981 (9)ref|XP_009781344.1|1e-48PREDICTED: ABC transporter G family member 11 [Nicotiana sylvestris]715003009 (5)ref|XP_008245603.1|9e-108PREDICTED: ABC transporter G family member 11 [Prunus mume]
JMSF049H10Sequence358001981 (9)711003009 (5)ref|XP_008245603.1|8e-83PREDICTED: ABC transporter G family member 11 [Prunus mume]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF036P18+ ACCCAGGCTTCATGCATTATCTATTCTTCGTGC
                      ____________________________________________________________
consensus ACCCAGGCTTCATGCATTATCTATTCTTCGTGC
 
. : . : . : . : . : . :
rJMSF003N17+ CGTCACCGTGGTTGAGAGCCTCATGATGGCCATAGCCAGTGTCG
rJMSF036P18+ TGTGCTTATACGCAAGCGTCACCGTGGTTGAGAGCCTCATGATGGCCATAGCCAGTGTCG
rJMSF030M11+ ATACGCAAGCGTCACCGTGGTTGAGAGCCTCATGATGGCCATAGCCAGTGTCG
                      ____________________________________________________________
consensus TGTGCTTATACGCAAGCGTCACCGTGGTTGAGAGCCTCATGATGGCCATAGCCAGTGTCG
 
. : . : . : . : . : . :
rJMSF003N17+ TTCCCAATTTCCTGATGGGCATCATCACAGGGGCAGGAATTCAGGGTATATTTATGCTAG
rJMSF036P18+ TTCCCAATTTCCTGATGGGCATCATCACAGGGGCAGGAATTCAGGGTATATTTATGCTAG
rJMSF030M11+ TTCCCAATTTCCTGATGGGCATCATCACAGGGGCAGGAATTCAGGGTATATTTATGCTAG
rJMSF049H10+ TTCCTGATGGGCATCATCACAGGGGCAGGAATTCAGGGTATATTTATGCTAG
                      ____________________________________________________________
consensus TTCCCAATTTCCTGATGGGCATCATCACAGGGGCAGGAATTCAGGGTATATTTATGCTAG
 
. : . : . : . : . : . :
rJMSF003N17+ TCTCCGGATACTTCAGACTCCCTAATGACATCCCAAAGCCTTTCTGGCGTTACCCAATGT
rJMSF036P18+ TCTCCGGATACTTCAGACTCCCTAATGACATCCCAAAGCCTTTCTGGCGTTACCCAATGT
rJMSF030M11+ TCTCCGGATACTTCAGACTCCCTAATGACATCCCAAAGCCTTTCTGGCGTTACCCAATGT
rJMSF049H10+ TCTCNGGATACTTCAGACTCCCTAATGACATCCCAAAGCCTTTCTGGCGTTACCCAATGT
                      ____________________________________________________________
consensus TCTCCGGATACTTCAGACTCCCTAATGACATCCCAAAGCCTTTCTGGCGTTACCCAATGT
 
. : . : . : . : . : . :
rJMSF003N17+ CCTACATCAGCTTCCACTTCTGGGCTTTACAGGGACAGTACCAGAATGATCTGAAGGGAT
rJMSF036P18+ CCTACATCAGCTTCCACTTCTGGGCTTTACAGGGACAGTACCAGAATGATCTGAAGGGAT
rJMSF030M11+ CCTACATCAGCTTCCACTTCTGGGCTTTACAGGGACAGTACCAGAATGATCTGAAGGGAT
rJMSF049H10+ CCTACATCAGCTTCCACTTCTGGGCTTTACAGGGACAGTACCAGAATGATCTGAAGGGAT
                      ____________________________________________________________
consensus CCTACATCAGCTTCCACTTCTGGGCTTTACAGGGACAGTACCAGAATGATCTGAAGGGAT
 
. : . : . : . : . : . :
rJMSF003N17+ TAGTGTTCGACAACCAGTCACCAGATCTGCCCAAAATCCCTGGCGAGTTCATCCTGGAAA
rJMSF036P18+ TAGTGTTCGACAACCAGTCACCAGATCTGCCCAAAATCCCTGGCGAGTTCATCCTGGAAA
rJMSF030M11+ TAGTGTTCGACAACCAGTCACCAGATCTGCCCAAAATCCCTGGCGAGTTCATCCTGGAAA
JMFN017D20- CCTGGCGAGTTCATCCTGGAAA
rJMSF049H10+ TAGTGTTCGACAACCAGTCACCAGATCTGCCCAAAATCCCTGGCGAGTTCATCCTGGAAA
                      ____________________________________________________________
consensus TAGTGTTCGACAACCAGTCACCAGATCTGCCCAAAATCCCTGGCGAGTTCATCCTGGAAA
 
. : . : . : . : . : . :
rJMSF003N17+ ACATATTCCAGATCGACGTGAACAGATCAAAATGGGTGGACCTCAGCGTTCTGTTCTGCA
rJMSF036P18+ ACATATTCCAGATCGACGTGAACAGATCAAAATGGGTGGACCTCAGCGTTCTGTTCTGCA
rJMSF030M11+ ACATATTCCAGATCGACGTGAACAGATCAAAATGGGTGGACCTCAGCGTTCTGTTCTGCA
JMFN017D20- ACATATTCCAGATCGACGTGAACAGATCAAAATGGGTGGACCTCAGCGTTCTGTTCTGCA
rJMSF049H10+ ACATATTCCAGATCGACGTGAACAGATCAAAATGGGTGGACCTCAGCGTTCTGTTCTGCA
                      ____________________________________________________________
consensus ACATATTCCAGATCGACGTGAACAGATCAAAATGGGTGGACCTCAGCGTTCTGTTCTGCA
 
. : . : . : . : . : . :
rJMSF003N17+ TGATCATCATCTACCGCCTCATATTCTTCATTGTAATCAAGATAAACGAGGATGTGACGC
rJMSF036P18+ TGATCATCATCTACCGCCTCATATTCTTCATTGTAATCAAGATAAACGAGGATGTGACGC
rJMSF030M11+ TGATCATCATCTACCGCCTCATATTCTTCATTGTAATCAAGATAAACGAGGATGTGACGC
JMFN017D20- TGATCATCATCTACCGCCTCATATTCTTCATTGTAATCAAGATAAACGAGGATGTGACGC
rJMSF049H10+ TGATCATCATCTACCGCCTCATATTCTTCATTGTAATCAAGATAAACGAGGATGTGACGC
                      ____________________________________________________________
consensus TGATCATCATCTACCGCCTCATATTCTTCATTGTAATCAAGATAAACGAGGATGTGACGC
 
. : . : . : . : . : . :
rJMSF003N17+ CGTGGATCCGAGGATACATAGCCAGGAGGAGAATGCAGCAAAAGAATGGGAATCAAACAA
rJMSF036P18+ CGTGGATCCGAGGATACATAGCCAGGAGGAGAATGCAGCAAAAGAATGGGAATCAAACAA
rJMSF030M11+ CGTGGATCCGAGGATACATAGCCAGGAGGAGAATGCAGCAAAAGAATGGGAATCAAACAA
JMFN017D20- CGTGGATCCGAGGATACATAGCCAGGAGGAGAATGCAGCAAAAGAATGGGAATCAAACAA
rJMSF049H10+ CGTGGATCCGAGGATACATAGCCAGGAGGAGAATGCAGCAAAAGAATGGGAATCAAACAA
                      ____________________________________________________________
consensus CGTGGATCCGAGGATACATAGCCAGGAGGAGAATGCAGCAAAAGAATGGGAATCAAACAA
 
. : . : . : . : . : . :
rJMSF003N17+ CTACGGTTGCGCCGTTTGGTCTCACCCAGTCCCCTTCATTGAGGTCCTACGCTACCGGAC
rJMSF036P18+ CTACGGTTGCGCCGTTTGGTCTCACCCAGTCCCCTTCATTGAGGTCCTACGCTACCGGAC
rJMSF030M11+ CTACGGTTGCGCCGTTTGGTCTCACCCAGTCCCCTTCATTGAGGTCCTACGCTACCGGAC
JMFN017D20- CTACGGTTGCGCCGTTTGGTCTCACCCAGTCCCCTTCATTGAGGTCCTACGCTACCGGAC
rJMSF049H10+ CTACGGTTGCGCCGTTTGGTCTCACCCAGTCCCCTTCATTGAGGTCCTACGCTACCGGAC
                      ____________________________________________________________
consensus CTACGGTTGCGCCGTTTGGTCTCACCCAGTCCCCTTCATTGAGGTCCTACGCTACCGGAC
 
. : . : . : . : . : . :
rJMSF003N17+ CTGCCAAGAAGTAGATCAAAACAAGAATCATCAATCATAGGTTACAACCTGTCAAGCCTT
rJMSF036P18+ CTGCCAAGAAGTAGATCAAAACAAGAATCATCAATCATAGGTTACAACCTGTCAAGCCTT
rJMSF030M11+ CTGCCAAGAAGTAGATCAAAACAAGAATCATCAATCATAGGTTACAACCTGTCAAGCCTT
JMFN017D20- CTGCCAAGAAGTAGATCAAAACAAGAATCATCAATCATAGGTTACAACCTGTCAAGCCTT
rJMSF049H10+ CTGCCAAGAAGTAGATCAAAACAAGAATCATCAATCATAGGTTACAACCTGTCAAGCCTT
                      ____________________________________________________________
consensus CTGCCAAGAAGTAGATCAAAACAAGAATCATCAATCATAGGTTACAACCTGTCAAGCCTT
 
. : . : . : . : . : . :
rJMSF003N17+ TGCATACTTGTAATATGTAACAAATTAAATACGAGAGAGAGATGGTGTTTACTCTACCGG
rJMSF036P18+ TGCATACTTGTAATATGTAACAAATTAAATACGAGAGAGAGATGGTGTTTACTCTA-CGG
rJMSF030M11+ TGCATACTTGTAATATGTAACAAATTAAATACGAGAGAGAGATGGTGTTTACTCTA-CGG
JMFN017D20- TGCATACTTGTAATATGTAACAAATTAAATACGAGAGAGAGATGGTGTTTACTCTA-CGG
rJMSF049H10+ TGCATACTTGTAATATGTAACAAATTAAATACGAGAGAGAGATGGTGTTTACTCTA-CGG
                      ____________________________________________________________
consensus TGCATACTTGTAATATGTAACAAATTAAATACGAGAGAGAGATGGTGTTTACTCTA-CGG
 
. : . : . : . : . : . :
rJMSF003N17+ TAATTATTATAAGTTCTTGCTC
rJMSF036P18+ TAATTATTATAAGTTCTTGCTC
rJMSF030M11+ TAATTATTATAAGTTCTTGCTCTAAATGCATGGAGTTGGCTCTTTCTTAGGCCAATTCAT
JMFN017D20- TAATTATTATAAGTTCTTGCTCTAAATGCATGGAGTTGGCTCTTTCTTAGGCCAATTCAT
rJMSF049H10+ TAATTATTATAAGTTCTTGCTCTAAATGCATGGAGTTGGCTCTTTCTTAGGCCAATTCAT
                      ____________________________________________________________
consensus TAATTATTATAAGTTCTTGCTCTAAATGCATGGAGTTGGCTCTTTCTTAGGCCAATTCAT
 
. : . : . : . : . : . :
rJMSF030M11+ TCATTCATTACGTACTCCTTATCAAATTGGTGAAACAATTATTTCTTACTTT
JMFN017D20- TCATTCATTACGTACTCCTTATCAAATTGGTGAAACAATTATTTCTTACTTT
rJMSF049H10+ TCATTCATTACGTACTCCTTATCAAATTGGTGAAACAATTATTTCTTACTTTGAGTACTG
                      ____________________________________________________________
consensus TCATTCATTACGTACTCCTTATCAAATTGGTGAAACAATTATTTCTTACTTTGAGTACTG